Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B13
(599 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase fam... 42 2e-04
At4g05160.1 68417.m00775 4-coumarate--CoA ligase, putative / 4-c... 40 0.001
At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 / 4-coumaroyl... 40 0.002
At5g38120.1 68418.m04592 4-coumarate--CoA ligase family protein ... 39 0.002
At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase fam... 39 0.002
At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative / 4-c... 38 0.005
At2g17650.1 68415.m02042 AMP-dependent synthetase and ligase fam... 38 0.007
At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) simil... 36 0.020
At1g20500.1 68414.m02554 4-coumarate--CoA ligase family / 4-coum... 36 0.020
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam... 36 0.027
At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) simil... 35 0.036
At1g20490.1 68414.m02553 AMP-dependent synthetase and ligase fam... 35 0.047
At1g65060.2 68414.m07376 4-coumarate--CoA ligase 3 / 4-coumaroyl... 32 0.25
At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 / 4-coumaroyl... 32 0.25
At1g20560.1 68414.m02563 AMP-dependent synthetase and ligase fam... 32 0.25
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 32 0.33
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 32 0.33
At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein ... 31 0.77
At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase fam... 30 1.3
At5g16370.1 68418.m01913 AMP-binding protein, putative similar t... 29 1.8
At4g25240.1 68417.m03632 multi-copper oxidase type I family prot... 29 3.1
At3g44150.1 68416.m04733 expressed protein hypothetical proteins... 28 4.1
At2g06500.1 68415.m00720 hAT dimerisation domain-containing prot... 28 5.4
At5g63930.1 68418.m08028 leucine-rich repeat transmembrane prote... 27 7.2
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 27 9.5
At1g69720.1 68414.m08023 heme oxygenase 3 (HO3) similar to heme ... 27 9.5
At1g64410.1 68414.m07301 hypothetical protein 27 9.5
>At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 546
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +1
Query: 325 ERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGT 504
+R VR A AL + GL ++DV+ +APN L + A G ++ ++ T Q L
Sbjct: 47 DRCVRLASALSDLGLSRHDVVAALAPNVPALCELYFGAPMAGAVLCVLNTTFDSQMLAMA 106
Query: 505 FSVIGPKIIFCQTE---RATETQLALNNLE 585
PK+ F +E A E+ L+N+E
Sbjct: 107 LEKTKPKVFFVDSEFLSVAEESLSLLSNIE 136
>At4g05160.1 68417.m00775 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative similar to 4CL2
[gi:12229665] from Arabidopsis thaliana, 4CL1
[gi:12229631] from Nicotiana tabacum; contains Pfam
AMP-binding enzyme domain PF00501; acyl-activating
enzyme superfamily; identical to cDNA 4-coumarate-CoA
ligase-like protein (At4g05160) GI:29893226
Length = 544
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/102 (22%), Positives = 40/102 (39%)
Frame = +1
Query: 226 LGKMIFQSFKDDPEFIVQIDGATDETETSKSALERTVRCAIALRNFGLQKNDVIVLMAPN 405
L +F++ P + D T ++ T R A G++KNDV+++ APN
Sbjct: 29 LVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAPN 88
Query: 406 HIDLEIPLYAALYLGVIIAPVDRTLGLQELQGTFSVIGPKII 531
+ A +G + + + E+ PKII
Sbjct: 89 SYQFPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKII 130
>At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 /
4-coumaroyl-CoA synthase 2 (4CL2) identical to SP|Q9S725
4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)
(4-coumaroyl-CoA synthase 2) {Arabidopsis thaliana}
Length = 556
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Frame = +1
Query: 172 ELTSRIIAESQIPT----DRFHLGKMIFQSFKDDPEFIVQIDGATDETETSKSALERTVR 339
+ ++ +I S++P + L IF++ + I+G T E T + +
Sbjct: 16 QCSNDVIFRSRLPDIYIPNHLPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRK 75
Query: 340 CAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGTFSVIG 519
A L N G++++DV++++ PN ++ + AA ++G I + E+
Sbjct: 76 LAAGLHNLGVKQHDVVMILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASA 135
Query: 520 PKIIFCQT 543
K+I Q+
Sbjct: 136 AKLIVTQS 143
>At5g38120.1 68418.m04592 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL2,
Arabidopsis thaliana [gi:12229665], 4CL1, Nicotiana
tabacum [gi:12229631]; contains Pfam AMP-binding enzyme
domain PF00501
Length = 550
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +1
Query: 280 IDGATDETETSKS---ALERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLG 450
ID ATD + A++R C L + G+++ DV+++++PN I + I + + LG
Sbjct: 57 IDAATDHRISFSDLWMAVDRVADCL--LHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLG 114
Query: 451 VIIAPVDRTLGLQELQGTFSVIGPKIIFCQTERA 552
++ + E+ + PK+ F E A
Sbjct: 115 AVLTTANPLNTASEILRQIADSNPKLAFTTPELA 148
>At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 580
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 325 ERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGT 504
+R R A +L + + KNDV+ +MAPN L +A G ++ P++ L +
Sbjct: 47 DRCCRLAASLISLNISKNDVVSVMAPNTPALYEMHFAVPMAGAVLNPINTRLDATSIAAI 106
Query: 505 FSVIGPKIIF 534
PKI+F
Sbjct: 107 LRHAKPKILF 116
>At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative (4CL) similar to 4CL2
[gi:12229665] and 4CL1 [gi:12229649] from [Arabidopsis
thaliana], 4CL1 [gi:12229631] from Nicotiana tabacum
Length = 570
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 280 IDGATDETETSKSALERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVI 456
IDGAT T R A + G++ DV++L+ PN + + A YLG +
Sbjct: 66 IDGATGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLAVAYLGAV 124
>At2g17650.1 68415.m02042 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to cDNA adenosine monophosphate
binding protein 2 AMPBP2 (AMPBP2) GI:20799712
Length = 603
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +1
Query: 325 ERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGT 504
+R +R A AL N G+ + DV+ +APN + +A G+I+ P++ L L
Sbjct: 94 QRCLRLASALTNLGISRGDVVAALAPNVPAMHELHFAVPMAGLILCPLNTRLDPSTLSVL 153
Query: 505 FSVIGPKIIF 534
+ KI+F
Sbjct: 154 LAHSEAKILF 163
>At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 12 (At1g65890) mRNA
GI:29893228, acyl-activating enzyme 12 [Arabidopsis
thaliana] GI:29893229
Length = 578
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 325 ERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGT 504
+R R A +L + + KNDV+ ++APN + +A G ++ P++ L +
Sbjct: 47 DRCCRLAASLISLNIGKNDVVSVVAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAI 106
Query: 505 FSVIGPKIIF 534
PKI+F
Sbjct: 107 LRHAKPKILF 116
>At1g20500.1 68414.m02554 4-coumarate--CoA ligase family /
4-coumaroyl-CoA synthase family similar to SP|Q42524 and
SP|Q9S725; contains Pfam AMP-binding enzyme domain
PF00501
Length = 412
Score = 35.9 bits (79), Expect = 0.020
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 280 IDGATDETETSKSALERTVRCAIAL-RNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVI 456
ID AT + T R A L G+++ DV+++++PN I + + + + LG +
Sbjct: 56 IDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAV 115
Query: 457 IAPVDRTLGLQELQGTFSVIGPKIIFCQTERATETQLALN 576
+ E+ + P ++F + A + +A++
Sbjct: 116 FTTANTLNTSGEISKQIADSNPTLVFTTRQLAPKLPVAIS 155
>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 535
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 325 ERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGT 504
+R R A +L + + KNDV+ ++APN + +A G ++ P++ L +
Sbjct: 47 DRCCRLAASLISLNIAKNDVVSVVAPNTPAIYEMHFAVPMAGAVLNPINTRLDATSITTI 106
Query: 505 FSVIGPKIIF 534
PKI+F
Sbjct: 107 LRHAQPKILF 116
>At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230,
acyl-activating enzyme 11 [Arabidopsis thaliana]
GI:29893231
Length = 572
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +1
Query: 325 ERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGT 504
+R R A +L + + +NDV+ ++APN + ++ G ++ P++ L + +
Sbjct: 47 DRCCRLAASLLSLNITRNDVVSILAPNVPAMYEMHFSVPMTGAVLNPINTRLDAKTIAII 106
Query: 505 FSVIGPKIIFCQTERATETQLAL 573
PKI+F E A Q L
Sbjct: 107 LRHAEPKILFVDYEFAPLIQEVL 129
>At1g20490.1 68414.m02553 AMP-dependent synthetase and ligase family
protein similar to SP|Q42524 and SP|Q9S725; contains
Pfam AMP-binding enzyme domain PF00501
Length = 447
Score = 34.7 bits (76), Expect = 0.047
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 280 IDGATDETETSKSALERTVRCAIAL-RNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVI 456
ID +T T R A L G+++ DV+++++PN I + + + + LG +
Sbjct: 56 IDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSPNSIYIPVVCLSVMSLGAV 115
Query: 457 IAPVDRTLGLQELQGTFSVIGPKIIFCQTERATETQLALN 576
+ + E+ + P ++F ++ A + A++
Sbjct: 116 VTTANTLNTSGEISKQIAQSNPTLVFTTSQLAPKLAAAIS 155
>At1g65060.2 68414.m07376 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 495
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/114 (23%), Positives = 45/114 (39%)
Frame = +1
Query: 247 SFKDDPEFIVQIDGATDETETSKSALERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIP 426
S D P IV G+T ++ T R A L G++K DVI+++ N +
Sbjct: 60 SVSDKPCLIV---GSTGKSYTYGETHLICRRVASGLYKLGIRKGDVIMILLQNSAEFVFS 116
Query: 427 LYAALYLGVIIAPVDRTLGLQELQGTFSVIGPKIIFCQTERATETQLALNNLEM 588
A +G + + QEL G K+I ++ + + NL +
Sbjct: 117 FMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVDKLKNLGENLTL 170
>At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 561
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/114 (23%), Positives = 45/114 (39%)
Frame = +1
Query: 247 SFKDDPEFIVQIDGATDETETSKSALERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIP 426
S D P IV G+T ++ T R A L G++K DVI+++ N +
Sbjct: 60 SVSDKPCLIV---GSTGKSYTYGETHLICRRVASGLYKLGIRKGDVIMILLQNSAEFVFS 116
Query: 427 LYAALYLGVIIAPVDRTLGLQELQGTFSVIGPKIIFCQTERATETQLALNNLEM 588
A +G + + QEL G K+I ++ + + NL +
Sbjct: 117 FMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVDKLKNLGENLTL 170
>At1g20560.1 68414.m02563 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to adenosine monophosphate binding
protein 1 AMPBP1 (AMPBP1) GI:20799710
Length = 556
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 307 TSKSALERTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIA-PVDRTLG 483
T + +R VR A AL G+ DV+ ++APN +P L+ GV +A + TL
Sbjct: 43 TWRQTRDRCVRIASALSQLGISTGDVVSVLAPN-----VPAMVELHFGVPMAGALLCTLN 97
Query: 484 LQELQGTFSVI----GPKIIF 534
++ +V+ G K+IF
Sbjct: 98 IRHDSSLVAVLLRHSGTKVIF 118
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +1
Query: 169 NELTSRIIAESQIPT----DRFHLGKMIFQSFKDDPEFIVQIDGATDETETSKSALERTV 336
N S +I S++P + L IFQ+ + I+G T T +
Sbjct: 17 NNNNSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISR 76
Query: 337 RCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLG 450
+ A G+ +NDV++L+ PN + + AA + G
Sbjct: 77 QIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRG 114
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +1
Query: 169 NELTSRIIAESQIPT----DRFHLGKMIFQSFKDDPEFIVQIDGATDETETSKSALERTV 336
N S +I S++P + L IFQ+ + I+G T T +
Sbjct: 17 NNNNSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISR 76
Query: 337 RCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLG 450
+ A G+ +NDV++L+ PN + + AA + G
Sbjct: 77 QIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRG 114
>At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL
from Pinus taeda, gi:515503, gi:1143308; contains Pfam
AMP-binding enzyme domain PF00501
Length = 566
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 364 GLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGTFSVIGPKIIFCQT 543
G+++ DV+ L+ PN + + + + LG I+ ++ + L E++ S + F T
Sbjct: 94 GVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTST 153
Query: 544 E 546
E
Sbjct: 154 E 154
>At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase family
protein similar to peroxisomal-coenzyme A synthetase
(FAT2) [gi:586339] from Saccharomyces cerevisiae;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA; identical to cDNA adenosine
monophosphate binding protein 3 AMPBP3
(AMPBP3)GI:20799714
Length = 514
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = +1
Query: 364 GLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGTFSVIGPKIIFCQT 543
G++ DV+ L PN ++ I A + AP++ +E + S K++
Sbjct: 52 GIKPGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSDSKLLLTSK 111
Query: 544 ERATETQLALNNLEM 588
E Q A + L++
Sbjct: 112 EGNAPAQEAASKLKI 126
>At5g16370.1 68418.m01913 AMP-binding protein, putative similar to
AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA adenosine monophosphate binding protein 5 AMPBP5
(AMPBP5) GI:20799718
Length = 552
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 328 RTVRCAIALRNFGLQKNDVIVLMAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGTF 507
R +R A +L + G+ ++DV+ +++PN + +A G I+ ++ L + +
Sbjct: 49 RCLRVASSLSSIGIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLL 108
Query: 508 SVIGPKIIF 534
G K++F
Sbjct: 109 RHCGSKLLF 117
>At4g25240.1 68417.m03632 multi-copper oxidase type I family protein
pollen-specific protein precursor -Nicotiana tabacum,
PID:g19902; contains Pfam profile: PF00394 Multicopper
oxidase
Length = 589
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 494 NSWRPSVLSTGAIITPRYNAAYNGISKSI*FGAINTMTSFFCSP 363
NSW+ VL T I PR+N Y F + + SFF SP
Sbjct: 93 NSWQDGVLGTNCPIPPRWNFTYQ-------FQVKDQIGSFFYSP 129
>At3g44150.1 68416.m04733 expressed protein hypothetical proteins -
Arabidopsis thaliana
Length = 246
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 451 VIIAPVDRTLGLQELQGTFSVIGPKI 528
V+++P DR L L + FSV PKI
Sbjct: 67 VLLSPCDRRLSLAAMNSQFSVFRPKI 92
>At2g06500.1 68415.m00720 hAT dimerisation domain-containing protein
/ transposase-related low similarity to transposase
[Ipomoea purpurea] AB004906 GI:4063770
Length = 582
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 103 NRQKIDKMTQQRRDNDSVHWYINELTSRIIA 195
N+ IDK QQ + + +HW E+ RIIA
Sbjct: 120 NKTTIDKYVQQEINKEKIHW--REVLVRIIA 148
>At5g63930.1 68418.m08028 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1102
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 376 NDVIVL-MAPNHIDLEIPLYAALYLGVIIAPVDRTLGLQELQGTFSVIGPKIIFCQTERA 552
+D+ VL M+ NH+ IP Y L+ +II LG L G I I C+T
Sbjct: 409 SDLWVLDMSDNHLSGRIPSYLCLHSNMIIL----NLGTNNLSGN---IPTGITTCKT--L 459
Query: 553 TETQLALNNL 582
+ +LA NNL
Sbjct: 460 VQLRLARNNL 469
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 262 PEFIVQIDGATDETETSKSALERTVRCAIALRNFGLQKNDVIVLMAPNHIDLE 420
PE ++ +D DET + T+ A+ R+ G I P HI L+
Sbjct: 126 PEQLITMDAPEDETSDADYLQNITIPSALVSRSLGSAIKTAIAHGDPVHISLD 178
>At1g69720.1 68414.m08023 heme oxygenase 3 (HO3) similar to heme
oxygenase 3 [Arabidopsis thaliana]
gi|14485563|gb|AAK63006
Length = 285
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 357 KFWTAEK*RHCVDGTE-SYRFRNTVICSIVS 446
++WT E+ HC++ TE S++F ++ I+S
Sbjct: 255 EWWTREEKSHCLEETEKSFKFSGEILRLILS 285
>At1g64410.1 68414.m07301 hypothetical protein
Length = 1231
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 151 SVHWYINELTSRIIAESQIPTDRFHLGKMIFQSFKDDPEFIVQIDGATDE 300
++ WY L R + + I + G+++ S K+ PEF+ + + DE
Sbjct: 118 AIFWYGERLNKRRNSRNPIYSGCCMQGQIVLPSLKESPEFLWYLLTSDDE 167
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,090,153
Number of Sequences: 28952
Number of extensions: 243834
Number of successful extensions: 672
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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