Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B12
(488 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37720.1 68418.m04541 RNA and export factor-binding protein, ... 32 0.18
At3g53970.1 68416.m05963 proteasome inhibitor-related similar to... 32 0.18
At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase fa... 31 0.42
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 30 0.96
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 29 1.3
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 29 1.3
At5g01950.1 68418.m00114 leucine-rich repeat transmembrane prote... 29 2.2
At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein si... 29 2.2
At1g64140.1 68414.m07266 expressed protein similar to putative d... 28 2.9
At1g15190.1 68414.m01816 hypothetical protein 28 2.9
At5g09670.2 68418.m01119 loricrin-related contains weak similari... 27 5.1
At5g09670.1 68418.m01118 loricrin-related contains weak similari... 27 5.1
At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /... 27 5.1
At2g32660.1 68415.m03992 disease resistance family protein / LRR... 27 5.1
At5g64550.1 68418.m08112 loricrin-related contains weak similari... 27 6.8
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 27 6.8
At1g63700.1 68414.m07209 protein kinase, putative contains prote... 27 6.8
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 27 9.0
At3g58860.1 68416.m06560 F-box family protein contains F-box dom... 27 9.0
At3g10650.1 68416.m01281 expressed protein 27 9.0
>At5g37720.1 68418.m04541 RNA and export factor-binding protein,
putative transcriptional coactivator ALY, Mus musculus,
EMBL:MMU89876
Length = 288
Score = 32.3 bits (70), Expect = 0.18
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 481 RSARGGTAPRGTAPSGRGRGSAVGTPRSPMTRS 383
R RGG RG GRGRG G + P+ +S
Sbjct: 237 RGGRGGFRARGRGNGGRGRGGGRGNGKKPVEKS 269
>At3g53970.1 68416.m05963 proteasome inhibitor-related similar to
proteasome inhibitor PI31 subunit (hPI31) SP:Q92530 from
[Homo sapiens]
Length = 302
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +3
Query: 27 PKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG 176
P P +D YG V G P G PR GG P E PGG
Sbjct: 250 PHPGMPPPGARFDPYGPPGVPGFEP-GRFTRQPPRGPGGGHPDLEHFPGG 298
>At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase
family protein low similarity to 55 kDa type II
phosphatidylinositol 4-kinase [Rattus norvegicus]
GI:13660755; contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 533
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 443 SEWSRQRQRCRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLIS 288
S++SR QRCR S ++ + +T + + HSL +++PC IS
Sbjct: 13 SQFSRSSQRCRLQSLTNLDFNFLGFNTKQTNLSASSHSLNNRSVSTPCFSIS 64
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 29.9 bits (64), Expect = 0.96
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 72 GAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG*E-SSCLRDPE*VTRCS 224
G +GG P G G P GG PG +PGG + S L DPE +T S
Sbjct: 349 GMPGMGGGMPAGMGGGGMPGAG-GGMPGGGGMPGGMDFSKILNDPELMTAFS 399
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +1
Query: 208 ESRDAPDNEINLDDPC-MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 384
+ DA ++ + + C K C GR CEI C C+ +C R C
Sbjct: 240 DPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQ----CTCVNQCSGHGKCRGGFCQCDKG 295
Query: 385 TWSSDCEV 408
+ +DC +
Sbjct: 296 WFGTDCSI 303
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +1
Query: 208 ESRDAPDNEINLDDPC-MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 384
+ DA ++ + + C K C GR CEI C C+ +C R C
Sbjct: 242 DPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQ----CTCVNQCSGHGKCRGGFCQCDKG 297
Query: 385 TWSSDCEV 408
+ +DC +
Sbjct: 298 WFGTDCSI 305
>At5g01950.1 68418.m00114 leucine-rich repeat transmembrane protein
kinase, putative receptor protein kinases
Length = 1032
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 248 SSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSR 126
S R SL GA D +I + L SWN L+ + + FS+
Sbjct: 334 SLRNCSLKGALPDFSKIRHLKYLDLSWNELTGPIPSSNFSK 374
>At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein
similar to lysosomal alpha-mannosidase GI:3522867 from
[Homo sapiens]
Length = 1019
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 127 LENGMAESLDERRFQEAERARVSEILNESRDAPD 228
LENG E + RR Q + V EILNE+ P+
Sbjct: 794 LENGQIELMLHRRMQHDDIRGVGEILNETVCLPE 827
>At1g64140.1 68414.m07266 expressed protein similar to putative
disease resistance protein GB:CAB40943 GI:4586107 from
[Arabidopsis thaliana]; weak similarity to Loricrin
(Swiss-Prot:P23490) [Homo sapiens]
Length = 646
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -2
Query: 292 SHRHGRRCSALSCTD--RQD*FHCQEH----RVTHSGSRRHELSQPPGIVSRPGSPPCRS 131
SH GRRC + CT + C+ H R THSG + P G C
Sbjct: 377 SHGGGRRCQSNGCTKGAQGSTMFCKAHGGGKRCTHSGCTKGAEGSTPFCKGHGGGKRCAF 436
Query: 130 RG 125
+G
Sbjct: 437 QG 438
>At1g15190.1 68414.m01816 hypothetical protein
Length = 248
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -1
Query: 257 MHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSRCSDSEMSPRGSPA 87
+HG + L+ L+ S + + ++ AL+ S L SR S P + ++SP SP+
Sbjct: 159 VHGLADLLPLTAPSSPNRLVEDSTALAKSPWFLGSRFSPAPEPYFAFMDLSPAESPS 215
>At5g09670.2 68418.m01119 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 546
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 292 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 113
+H G+RC L CT + + ++H G RR E + +R S C G +
Sbjct: 199 THGGGKRCEHLGCTKSAE--GKTDFCISHGGGRRCEFLEGCDKAARGRSGLCIKHGG-GK 255
Query: 112 RC 107
RC
Sbjct: 256 RC 257
>At5g09670.1 68418.m01118 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 546
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 292 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 113
+H G+RC L CT + + ++H G RR E + +R S C G +
Sbjct: 199 THGGGKRCEHLGCTKSAE--GKTDFCISHGGGRRCEFLEGCDKAARGRSGLCIKHGG-GK 255
Query: 112 RC 107
RC
Sbjct: 256 RC 257
>At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /
PAP2-related contains Pfam profile PF01569: PAP2
superfamily
Length = 301
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 118 SEHLENGMAESLDERRFQEAERARVSEILN 207
S H+ M SLD RR Q A V +ILN
Sbjct: 214 SGHVAGSMIASLDMRRMQRLRLAMVFDILN 243
>At2g32660.1 68415.m03992 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4
[Lycopersicon hirsutum] gi|2808683|emb|CAA05268
Length = 589
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 27 PKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG*ESSCLRD 200
P+ S L Y D + G P+G +G P+ G G +P E SCLR+
Sbjct: 472 PQELGRLSYLAYIDVSDNQLTGKIPQGTQIIGQPKSSFEGNSGLCGLP--LEESCLRE 527
>At5g64550.1 68418.m08112 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 634
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +1
Query: 238 NLDDPCMKVHC---SAGRVCEINEHGEAICNCIKECP 339
N D + + C SAGR+ + H +C+ + CP
Sbjct: 21 NFGDTALSLKCLGSSAGRLIGSSHHNHKLCSDVSNCP 57
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +1
Query: 91 GLPRGDISESEHLENG----MAESLDERRFQEAERARVSEIL-NESRDAPDNEINLD 246
G ISESE LENG ++ D+ + Q+ +R + +L N D P+ E N D
Sbjct: 1100 GKENNSISESEALENGENSQESDEKDKGQQQQVLASRGAMLLQNALADKPEEETNDD 1156
>At1g63700.1 68414.m07209 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to MEK kinase
(MAP3Ka) [Arabidopsis thaliana] gi|4204912|gb|AAD10848
Length = 883
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +3
Query: 3 HLHGRRRGPKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPG 173
H+ GRR P S+P AL+ GGA P H R H G G PG
Sbjct: 742 HISGRR-SPSPISSPHALSGSSTPLTGCGGAIPFHHQRQTTVNFLHEG-IGSSRSPG 796
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 26.6 bits (56), Expect = 9.0
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 305 PCSLISQTRP-ALQCTFMHGSSRLISLSGASRD--SFRISETRALSA-SWNRLSSRLSAM 138
PC+L + +L ++GSSRL + S + +S T S RL SRL +
Sbjct: 774 PCALPGDSNMRSLSKLLLNGSSRLKTFPEISTNIQELNLSGTAIEEVPSSIRLWSRLDKL 833
Query: 137 PFSRCSDSEMSP 102
SRC + +M P
Sbjct: 834 DMSRCKNLKMFP 845
>At3g58860.1 68416.m06560 F-box family protein contains F-box domain
Pfam:PF00646
Length = 457
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 395 DDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRLISLSGAS 216
DD + L + TL LESV +G Q + + C ++ + L M R + LS +S
Sbjct: 157 DDDMFLPMLKTLVLESVEFGRGQFQTLLPA-CPVLEE----LMLLNMEWKDRNVILSSSS 211
Query: 215 RDSFRIS 195
+ +I+
Sbjct: 212 LKNLKIT 218
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 293 STSTGKLSATASRSVHTKPTLGARCAQTSTRPG 391
+TST K AS T GA+ A+ +RPG
Sbjct: 863 NTSTFKFGGMASADQSTGIVFGAKSAENKSRPG 895
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,414,289
Number of Sequences: 28952
Number of extensions: 219062
Number of successful extensions: 929
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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