Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B04
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.13 |atp3||F1-ATPase gamma subunit |Schizosaccharomyces ... 120 1e-28
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.021
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 32 0.085
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.085
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 31 0.11
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.15
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.26
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 30 0.34
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.34
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 29 0.79
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.4
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 28 1.4
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 27 1.8
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 1.8
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 27 3.2
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 26 4.2
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 26 5.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 26 5.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 7.4
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.4
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 25 7.4
SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces pombe... 25 7.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 7.4
SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces po... 25 9.7
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 25 9.7
>SPBC1734.13 |atp3||F1-ATPase gamma subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 120 bits (290), Expect = 1e-28
Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 2/202 (0%)
Frame = +1
Query: 52 LKKAVKMLSRVAPGVCTQAVAVVN-HQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSA 228
L++ + SR+ P C V H + ATLK I RLKS+KNI+KIT+++K V+
Sbjct: 2 LRQTLTQASRMRP--CISVVGFRGFHASSPCEATLKEIEQRLKSIKNIEKITKTIKTVAQ 59
Query: 229 AKYTRAERDLKAARPYGEGAVQFYERAEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKV 408
K TRA+R ++A+ Y + + ++ A A E+ K L VA +SD+GLCG +H+ +S++
Sbjct: 60 TKLTRAQRAMEASNKYYRVSDEVFKEAGTKAPEEG-KTLMVACSSDKGLCGGIHSSISRL 118
Query: 409 IRNRLNEPGA-ENIKVICVGDKSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAIL 585
IR L++P EN + +G+K R+ L R + IG P+F +A Q+++ IL
Sbjct: 119 IRRELHDPKTFENTSLCILGEKVRTQLLRFCPESFYLTFAHIGGASPSFEEALQISSNIL 178
Query: 586 NSGYEFASGKIVYXKFKSVVSY 651
++ +VY KF S VS+
Sbjct: 179 EHAKDYDRIVLVYNKFASAVSF 200
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 33.9 bits (74), Expect = 0.021
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT 589
SATGS+ + + +S S TS A+ + + ++TSS AA + S S+T
Sbjct: 969 SATGSSTSSIATASVSGSSTSSVATASATDSSTSSI-----AAASVTGSSTSSVATASVT 1023
Query: 590 LGTSSLPARLSXTNSSLSS 646
++S A S T+SS SS
Sbjct: 1024 DSSTSSVATASATDSSTSS 1042
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSS 514
SAT S+ + ++ ++ S TS A+ + + ++TSS
Sbjct: 1034 SATDSSTSSIAVASVTGSSTSSVATASATDSSTSS 1068
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/80 (21%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKS-AACRPRSWTRLSSRPQSL 586
SAT S+ + + ++ S +S A+ +V+ + TSS + S ++ + + +++ +
Sbjct: 1060 SATDSSTSSVATASITGSLSSSIATASVTGSPTSSVTAVSSTSSVEGTASSTIAAAASAA 1119
Query: 587 TLGTSSLPARLSXTNSSLSS 646
TL + + + T+S+ +S
Sbjct: 1120 TLSSDAASGSSTVTSSATAS 1139
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 31.9 bits (69), Expect = 0.085
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT 589
S+ + P + + +SA+ + +VST N+SS ++S+ + S + L+++P SL+
Sbjct: 279 SSPRCSTPSVSSTFVSATSEPEVETYSVSTKNSSSNKNLRSSLSKLLSTSNLNNKPLSLS 338
Query: 590 LGTSSLPA 613
S+P+
Sbjct: 339 STAPSMPS 346
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.085
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTS------SALLMKSAACRPRSWTRLS- 568
S++ S++P S +S+S +SP++S ST ++S S+ + S++ + T S
Sbjct: 329 SSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSS 388
Query: 569 --SRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
SRP S + +SSL + S ++S SS +S
Sbjct: 389 SSSRPASSSSHSSSLSSHKSSSSSKSSSAPVS 420
Score = 27.9 bits (59), Expect = 1.4
Identities = 27/79 (34%), Positives = 37/79 (46%)
Frame = +2
Query: 422 STNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTS 601
ST+ E+ IS S S + P S S+ ++S++ S + S T S+ P S TS
Sbjct: 152 STSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSS-TFSSAAPTS----TS 206
Query: 602 SLPARLSXTNSSLSSPMLS 658
S S SS SSP S
Sbjct: 207 SSYLSSSSVVSSSSSPSSS 225
Score = 25.8 bits (54), Expect = 5.6
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
S+P S S+T S++ S S S T ++S S+ TSS+ A + L
Sbjct: 348 SSPSSSSFSSTTSSSK----SSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSL 403
Query: 566 SSRPQSLTLGTSSLPARLSXTNSSLSS 646
SS S + +SS P + ++S SS
Sbjct: 404 SSHKSSSSSKSSSAPVSSAFYHNSTSS 430
Score = 25.0 bits (52), Expect = 9.7
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
S VS S+ S++P L S S+ +S ++S S ++TSS+ SAA S + L
Sbjct: 154 SVEVSISSSSLSSSDP-LTSSTFSSLSSSTSSS-QPSVSSTSSSTF-SSAAPTSTSSSYL 210
Query: 566 SSRPQSLTLGTSSLPARLSXTNSSLSS 646
SS + + S + + T+SSLS+
Sbjct: 211 SSSSVVSSSSSPSSSSSSTLTSSSLST 237
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 31.5 bits (68), Expect = 0.11
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 58 KAVKMLSRVAPGVCTQAVAVVNHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKY 237
K + LS C +AV + +N KAI I K VKNI T ++++
Sbjct: 1045 KRIYSLSADMVKACDEAVERLGADDTKNKQPRKAILIEFKGVKNINAETVTLRVKDLTHL 1104
Query: 238 TRAERDL 258
RA + L
Sbjct: 1105 HRAYKGL 1111
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 408 HLRDTGVDSTTQSSVRGHSDVE 343
HL +T D +T SSVRG+ V+
Sbjct: 241 HLHNTWEDYSTLSSVRGYKKVD 262
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.15
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 455 SASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTNS 634
S + SP +S S++ TSS+L S + + ++S + + TSS A S T+S
Sbjct: 98 STTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSS 157
Query: 635 SLSS 646
SL+S
Sbjct: 158 SLAS 161
Score = 30.7 bits (66), Expect = 0.20
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 455 SASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTNS 634
SAS +S +S S++ TSS+ L S+ S + SS S + +SSL A S T+S
Sbjct: 69 SASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSL-ASSSTTSS 127
Query: 635 SLSSPMLS 658
SL+S ++
Sbjct: 128 SLASSSIT 135
Score = 29.9 bits (64), Expect = 0.34
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 413 ATGSTNPELRISRLSASETSPAASCN--VSTANTSSALLMKSAACRPRSWTRLSSRPQSL 586
A+ STN S S+S TS +A+ + S++ TSS+L S + + ++S +
Sbjct: 92 ASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLAS 151
Query: 587 TLGTSSLPARLSXTNSSLSS 646
+ TSS A S TNS+ S+
Sbjct: 152 SSTTSSSLAS-SSTNSTTSA 170
Score = 29.5 bits (63), Expect = 0.45
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTAN--TSSALLMKSAACRPRSWTRLSSRPQS 583
S++ T+ S L++S + ++S N +T+ TSS+L SA + + +S +
Sbjct: 71 SSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLA 130
Query: 584 LTLGTSSLPARLSXTNSSLSS 646
+ TSS A S T+SSL+S
Sbjct: 131 SSSITSSSLASSSITSSSLAS 151
Score = 29.5 bits (63), Expect = 0.45
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT 589
S+T ST S ++S S A+ N +T+++ ++ + S + + LSS S +
Sbjct: 162 SSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNS 221
Query: 590 LGTSSLPARLSXTNSSLSSPMLS 658
+SSL + S NS+ S+ S
Sbjct: 222 ATSSSLAS--SSLNSTTSATATS 242
Score = 29.5 bits (63), Expect = 0.45
Identities = 26/123 (21%), Positives = 48/123 (39%)
Frame = +2
Query: 278 AKALFSSTKGXXXXXXXXXXXXXXXXXXXXEDCVVLSTPVSRR*SATGSTNPELRISRLS 457
+ A SS S+ +S ++ +T+ L S L+
Sbjct: 174 SSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLN 233
Query: 458 ASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTNSS 637
++ ++ A S ++S+ +SS L S + T S+ S TSSL + +++
Sbjct: 234 STTSATATSSSISSTVSSSTPLTSSNSTTAA--TSASATSSSAQYNTSSLLPSSTPSSTP 291
Query: 638 LSS 646
LSS
Sbjct: 292 LSS 294
Score = 29.1 bits (62), Expect = 0.60
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVS-----TANTSSALLMKSAACRPR 550
S+ S +++ T+ L S +++S + +++ + S T +T+SA SA
Sbjct: 122 SSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSL 181
Query: 551 SWTRLSSRPQSLTLGTSSLPARLS--XTNSSLSSPMLS 658
S T S+ S +L +SSL + S T+SSLSS S
Sbjct: 182 SSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAAS 219
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/82 (32%), Positives = 40/82 (48%)
Frame = +2
Query: 413 ATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTL 592
A+ STN + S++ +S +S S + TSS+L S S T ++ SL
Sbjct: 160 ASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSL----NSTTSATATSSSL-- 213
Query: 593 GTSSLPARLSXTNSSLSSPMLS 658
SS A S T+SSL+S L+
Sbjct: 214 --SSTAASNSATSSSLASSSLN 233
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.3 bits (65), Expect = 0.26
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 1/132 (0%)
Frame = +2
Query: 266 LVHMAKALFSSTKGXXXXXXXXXXXXXXXXXXXXEDCVVLSTPVSRR*SATGSTNPELRI 445
+V+ + + SST V STP++ S S+ P
Sbjct: 3149 VVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSS-SVLNSSTPITSS 3207
Query: 446 SRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLS 622
+ L+ S ++S N STA TSS++L S S S+ S T+ +S P S
Sbjct: 3208 TTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSS 3267
Query: 623 XTNSSLSSPMLS 658
+S S+P+ S
Sbjct: 3268 SVLNS-STPITS 3278
Score = 28.7 bits (61), Expect = 0.79
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
STP++ ST S++ + ++ N STA TSS++L S S
Sbjct: 3081 STPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNS 3140
Query: 566 SSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S T+ SS P S T + S+P+ S
Sbjct: 3141 STPITSSTVVNSSTPI-TSSTTLNTSTPITS 3170
Score = 28.7 bits (61), Expect = 0.79
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
STP++ ST + +++ + ++ N STA TSS++L S S
Sbjct: 3309 STPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNS 3368
Query: 566 SSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S T+ SS P S T + S+P+ S
Sbjct: 3369 STPITSSTVVNSSTPI-TSSTALNTSTPITS 3398
Score = 28.3 bits (60), Expect = 1.0
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ S S+ P S L+ S ++S N STA TSS L S S
Sbjct: 981 STPITSS-SVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLN 1039
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S T+ +S P S +S S+P+ S
Sbjct: 1040 SSTPITSSTVVNTSTPITSSTVVNS-STPITS 1070
Score = 28.3 bits (60), Expect = 1.0
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ S S+ P + L+ S ++S N STA TSS+++ S S
Sbjct: 3057 STPITSS-SVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLN 3115
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S ++ SS P S +S S+P+ S
Sbjct: 3116 SSTAITSSSILNSSTPITSSSILNS-STPITS 3146
Score = 27.5 bits (58), Expect = 1.8
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ + S+ P + L+ S ++S N STA TSS+++ S S
Sbjct: 3141 STPITSS-TVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLN 3199
Query: 563 LSSRP--QSLTLGTSSLPARLSXTNSS 637
SS P S TL TS+ S NSS
Sbjct: 3200 -SSTPITSSTTLNTSTPITSSSVLNSS 3225
Score = 27.5 bits (58), Expect = 1.8
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ + S+ P + L+ S ++S N STA TSS L S S
Sbjct: 3285 STPITSS-TVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLN 3343
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S ++ SS P S +S S+P+ S
Sbjct: 3344 SSTAITSSSILNSSTPVTSSSVLNS-STPITS 3374
Score = 26.6 bits (56), Expect = 3.2
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ S S+ P + L+ S ++S N STA TSS L S S
Sbjct: 669 STPITSS-SVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLN 727
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S T +S P S +S S+P+ S
Sbjct: 728 SSTPITSSTALNTSTPITSSSVLNS-STPITS 758
Score = 25.8 bits (54), Expect = 5.6
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ + S+ P + L++S ++S N ST TSS ++ S +
Sbjct: 2505 STPITSS-TVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVN 2563
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ SLT SS P S +S S+P+ S
Sbjct: 2564 SSTPITSLTALNSSTPITSSSVLNS-STPITS 2594
Score = 25.4 bits (53), Expect = 7.4
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ +A ++ P + +++S ++S N STA SS++L S S
Sbjct: 3417 STPITSS-TALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVLN 3475
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLSL 661
S+ S T+ TSS+ S S SS + S+
Sbjct: 3476 SSTPISSSTVITSSVVIGSSSVLSYASSIVSSV 3508
Score = 25.0 bits (52), Expect = 9.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASC-NVSTANTSSALLMKSAACRPRSWTR 562
STP++ + ++ P S L++S ++S N ST TSS++L S +
Sbjct: 1209 STPITSS-TVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVN 1267
Query: 563 LSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ S T +S+P S +S S+P+ S
Sbjct: 1268 SSTPITSSTALNTSIPITSSSVLNS-STPITS 1298
Score = 25.0 bits (52), Expect = 9.7
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Frame = +2
Query: 413 ATGST--NPELRISRLSASETSPAASCNV--STANTSSALLMKSA-----ACRPRSWTRL 565
+TGST N + S+S T+ N ST + S ++ S+ + + S ++
Sbjct: 3716 STGSTMHNTVSHATSTSSSFTTSHLPTNTLASTFDNSQSIFSSSSGVPGLSTKSSSLGKI 3775
Query: 566 SSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S SLTL +SS+ T S ++SP LS
Sbjct: 3776 GSSSISLTLSSSSIRDAELPTPSRMTSPSLS 3806
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 29.9 bits (64), Expect = 0.34
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 370 GLCGAVHTGVSKVIRNRLNEPGAENIKVICVGDKSRSILQRLYSKHIISVA 522
G+ GA+ TGV +N L E GA ++ +IC +L +YS ++VA
Sbjct: 92 GIGGAIGTGVWVGSKNTLREGGAASV-LICYSLVGSMVLMTVYSLGELAVA 141
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.34
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQS-- 583
S++ S++ S S+S +S ++S + S TSS S++ S + SSRP S
Sbjct: 179 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSS 238
Query: 584 ---LTLGTSSLPARLSXTNSSLSS 646
T+ +S+ + ++ T SS SS
Sbjct: 239 SFITTMSSSTFISTVTVTPSSSSS 262
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 28.7 bits (61), Expect = 0.79
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 422 STNPELRISRLSASETSPAASCNVSTANTSSALLMK--SAACRPRSWTRLSSRPQSLTLG 595
S+NPEL S L A SPA N + N SS K S P + +RP S
Sbjct: 267 SSNPELSNSNLLAKNESPADVSNNESGNESSKEPDKEHSTPIHPTTPVSRCARPSSRQQT 326
Query: 596 TSSLPAR 616
S L A+
Sbjct: 327 ISILQAQ 333
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSW--- 556
+TP++ ++ +++ + ++ + + T+ +S ++ST+++S+A S A S+
Sbjct: 622 TTPITGTSTSKVTSSTSIPLTSTNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSN 681
Query: 557 TRLSSRPQSLTLGTSSLPARLSX---TNSSLSS 646
SS S T+S P+ + T+SSLSS
Sbjct: 682 VTTSSSTVSTPPPTTSFPSTFTTSFITSSSLSS 714
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 446 SRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSX 625
S SAS S + S ++S+ +TSSA ++ S + SS S + TSS + +
Sbjct: 504 SSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSHTI 563
Query: 626 TNSSLS 643
T++S S
Sbjct: 564 TSTSQS 569
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT 589
S G+ P+ S L+ A + + STA TS + W +S+P S
Sbjct: 181 SECGARFPQTLKSPLTPIGGDSARTVSASTARTSDKFFPRHTRAHSDFWIPATSKP-SRH 239
Query: 590 LGTSSLPARLSXTNSSLSS 646
SS+ + T SS+SS
Sbjct: 240 ASHSSIGDLTTITQSSISS 258
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 422 STNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTS 601
+++ + +S + AS + AA+ VST SSA SA + S S +
Sbjct: 221 TSSSSIALSSVVASASVSAANKGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISSAT 280
Query: 602 SLPARLSXTNSSLS 643
S A S T+SS+S
Sbjct: 281 SSSASASPTSSSVS 294
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 403 KVIRNR-LNEPGAENIKVICVGDKSRSILQR 492
K++R++ LN G E + ++ VG+KS +QR
Sbjct: 97 KIVRDKILNHTGTEWVPIVVVGNKSDLHMQR 127
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 162 DGFKCGHIPVLLVVDHRHRLGAYTRCDTTQHFHGFFQ 52
D F + V + H + +++CD TQ FH F Q
Sbjct: 254 DNFFRDFLKVCDECNFNHNIKEFSKCDFTQMFHHFEQ 290
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -3
Query: 417 VADHLRDTGVDSTTQSSVRGHSDVELLRVILKGDYLSPFVE 295
+A LRD GVD SS H D R+ +K Y PF E
Sbjct: 282 LAARLRDGGVDLIDVSSGGNHKD---QRIEVKDCYQVPFAE 319
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.6
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +2
Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT 589
SAT ++ S+S TSPA+S +++ +SS+ S+ S + SS +LT
Sbjct: 53 SATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSS-----SASLTSSSSATLT 107
Query: 590 LGTSSLPARLSXTNSSLSSPMLSL 661
+S+ P S ++ +LSS SL
Sbjct: 108 SSSSASPTS-SSSSHALSSSSSSL 130
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 503 NTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
+TSS +K+ AC ++S Q+ + ++L R+S + SP L+
Sbjct: 2 STSSLAFLKAKACAEIVAELIASENQNKVINLNALKMRISKKHQLSESPRLT 53
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 7.4
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 416 TGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT-- 589
T +T+PE + ++ + S +ST +T+S + ++ + T SS T
Sbjct: 562 TYTTSPEETTTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSH 621
Query: 590 LGTSSLPARLSXTNSSLSSPM 652
L +SS+ + + ++SS SS M
Sbjct: 622 LSSSSVHSSSAHSSSSRSSSM 642
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 7.4
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 446 SRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSX 625
S L+AS S + S ++TSS+ S++ S T SS S T +SS+ + +S
Sbjct: 122 STLAASTISGGIYSSTSASSTSSSTATPSSS----STTSSSSSSSSSTPISSSITSSISS 177
Query: 626 T-NSSLSSPMLS 658
+ +SS+SS S
Sbjct: 178 SASSSVSSSSAS 189
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSS 514
STP+S +++ S++ +S SAS + +S + T + SS
Sbjct: 164 STPISSSITSSISSSASSSVSSSSASSSGSISSADAKTVSASS 206
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 440 RISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLP 610
++S L A SP + +++S+ K + W RL + QS TSSLP
Sbjct: 15 KVSPLKAKAMSPDDVSRLFCKSSTSSATRKHDPFH-KLWDRLQPKAQSTIQRTSSLP 70
>SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 86 HRVYAPKRWRWSTTSRTGIWPHLKPSPFVSSL*RIF 193
H+VY R W T G +P+LK + V L R+F
Sbjct: 281 HQVYP--RGNWVFTCLNGYYPYLKLTLLVGFLFRLF 314
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 175 KSVKNIQKITQSMKMVSAAKYTRAERDLK 261
+ VKN+Q S+K +SAA +TR +K
Sbjct: 958 QQVKNMQLELASLKQISAAFFTRIPLKIK 986
>SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 562
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 155 LSVAIFLFCWWLTTATAWVHTP 90
+S++I+ F +WLT +W+ P
Sbjct: 115 VSLSIWRFLYWLTFVLSWIILP 136
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 387 PHRCLEG-DPQPAQRTRS*EYQGYLRRRQVPQHLATSLQ 500
P+ C + + A++TR + Q Y R R++ Q + TSLQ
Sbjct: 230 PYVCFRRREIRQARKTRRSDAQSYDRLRRLRQSMETSLQ 268
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,689,457
Number of Sequences: 5004
Number of extensions: 54647
Number of successful extensions: 231
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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