Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B04
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10518| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 6e-43
SB_18300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 30 1.9
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3) 29 2.6
SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07) 29 3.4
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 4.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_27105| Best HMM Match : GDC-P (HMM E-Value=0) 29 4.5
SB_49774| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_54647| Best HMM Match : Phage_tail_S (HMM E-Value=2.4) 28 7.8
SB_43| Best HMM Match : Motile_Sperm (HMM E-Value=0.61) 28 7.8
>SB_10518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 171 bits (415), Expect = 6e-43
Identities = 76/167 (45%), Positives = 119/167 (71%)
Frame = +1
Query: 160 ISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVVALEDDPK 339
+S+RL+SVKNIQKIT+SMKMVSAAK+ RAE++LK+AR YG+GA Y++ E+ +DPK
Sbjct: 62 VSLRLRSVKNIQKITKSMKMVSAAKFGRAEKELKSARAYGDGATALYDKVEIKQESEDPK 121
Query: 340 QLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGDKSRSILQRLYSKHIISV 519
L V ++SDRGLCG +H+G++K ++ + + N+ ++ GDK++ IL R K+++
Sbjct: 122 HLIVVLSSDRGLCGGIHSGLAKAVKASIAGNPSRNVGIVSFGDKTKQILSRTLGKNMLMS 181
Query: 520 ANEIGRLPPTFLDAAQLATAILNSGYEFASGKIVYXKFKSVVSYAQS 660
++G+ PP F +A LA IL++G++F +G + Y F+SVVS+ S
Sbjct: 182 FMDVGKKPPLFCEATFLAQEILDAGFDFNTGDMFYNVFRSVVSFRAS 228
>SB_18300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 506 TSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTNSSLSS 646
T ++L K+ + PR T SSRP + GT+S +R + +LSS
Sbjct: 95 TKASLYRKAKSLSPREQTSDSSRPGTPVKGTNSRTSRHTQPRGTLSS 141
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 100 TQAVAVVNHQQNRNMATLKAISIRLKSVKNIQKITQS 210
TQA V+ Q+ N ATL I+ +LKS + IT S
Sbjct: 2754 TQATTTVSKQRRINEATLTTIAAKLKSTLHSSTITPS 2790
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +2
Query: 413 ATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSL-- 586
A S +P IS S +S + S +T ++ SA+ P SW+ LSS SL
Sbjct: 819 AMSSPSPPSSISLSSLHPIQKVSSLSSSIGSTLASQSTASASHIP-SWSSLSSSFPSLSS 877
Query: 587 ---TLGTSSLPARLSXTNSSLSSPMLSL 661
+ +S+ P + ++SS S P LSL
Sbjct: 878 RLSSASSSASPPGTTTSSSSSSFPSLSL 905
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 413 ATGSTN----PELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQ 580
ATGS P+ + + SPA+ ++ + SS+ S P T + +
Sbjct: 84 ATGSPGSASPPKTNGPDVGTQQPSPASPTSIKQSPNSSS----STGQTPTEKTDSTPKSS 139
Query: 581 SLTLGTSSLPARLSXTNSSLSS 646
TL TSS PA + T+SSLS+
Sbjct: 140 GSTLPTSSTPATQNPTDSSLST 161
>SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3)
Length = 866
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 422 STNPELRISRLSA-SETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLT 589
S NP RISR S+ PA+ N S + + SA +AAC + T S+ P T
Sbjct: 107 SRNPRPRISRRKQPSKHVPASGENASESTSESANNAITAACHGQLTTGASNEPSQDT 163
>SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07)
Length = 242
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
Frame = -3
Query: 633 EFVIDNLAGSELVPRVKDCGRELSRVQERGRQAADFISNADDVFAVETLQDAAGLVSDAD 454
+F++ EL G +L VQE +Q D D V +D + D D
Sbjct: 25 QFLVTGHENGELCQWDVKSGNKLISVQEHSKQINDIQMYKDSTMFVTASKDTTAKLFDTD 84
Query: 453 NLDIL---------SSGFVEPVADHLRDTG----VDSTTQSSVRGHSDVELLRVILK 322
+L L +S + P+ DH+ G ++ TT S+ G D V+ +
Sbjct: 85 SLRHLKTYKTDRPVNSAALSPIKDHVVVGGGQEAMEVTTTSTRVGKFDARFFHVVFE 141
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 55 KKAVKMLSRVAPGVCTQAVAVVNHQQNRNMATLKAISIRLKSVKNIQ-KITQSMKMVSAA 231
K K ++ A T+A + + N +T A + K+ +N K T++ ++
Sbjct: 57 KATEKYSTKAAENYSTKATENYSTKATENYSTKAAENYSTKATENYSTKATENYSTKASE 116
Query: 232 KYTRAERDLKAARPYGEGAVQFY 300
YT KAA Y A + Y
Sbjct: 117 NYTTENYSTKAAEKYSTKATENY 139
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -3
Query: 630 FVIDNLAGSELVPRVKDCGRELSRVQERGRQAADFISNADDVFAVETLQDAAGLVS 463
+ D + S L+ V+ C RE Q A + D+VF T+QDA ++S
Sbjct: 1243 YTSDTCSASHLISSVEGCDRESFSCQ-----AFNIAGTGDEVFYNATIQDAPAIIS 1293
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 458 ASETSPAASCNVSTANTSSALLMKSAACRPRSW 556
A + S A+C+V+T ++S + C+PR W
Sbjct: 895 APDLSDEANCSVATNCSASMFRCANGQCKPRDW 927
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
STP + +T ST ++ ++P+A ST +T S S P + +
Sbjct: 97 STPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTP 156
Query: 566 SSRPQSLTLGTSSLPARLSXTNSSLSSPMLS 658
S+ +T GT S P+ S + ++ LS
Sbjct: 157 STPSTPITPGTPSTPSTPSAPGTPITPSTLS 187
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 422 STNPELRISRLSASETSPA---ASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTL 592
ST E ISR ++ SP+ SC S N+S ++ PR L SRP+ ++L
Sbjct: 846 STFGEKEISRGASGFESPSEDNTSCEKSR-NSSRSISTLQRKLLPRGENSLRSRPELVSL 904
Query: 593 GTSSLPA 613
+ +P+
Sbjct: 905 SAAGIPS 911
>SB_27105| Best HMM Match : GDC-P (HMM E-Value=0)
Length = 767
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 390 VDSTTQSSVRGHSDVELLRVILKGDYLSPFVELNSAFAIWTS 265
++ T SS+R D++L I + D LS +++ IW S
Sbjct: 6 IEKTVPSSIRYREDLQLSEAISEPDLLSRLRQISKGNQIWRS 47
>SB_49774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 482 SCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTL-GTSSLPAR 616
SCN+STA++ LL++ W L + QS T G +P R
Sbjct: 38 SCNISTADSEKRLLLRCDTPLVLKWYTLIFQEQSATAQGLEFVPER 83
>SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 473 PAASCNVSTANTSSALLMKSAACRPRS 553
P A+C VS+A SSALL S+ C S
Sbjct: 15 PLATCVVSSAYISSALLETSSECTDNS 41
>SB_54647| Best HMM Match : Phage_tail_S (HMM E-Value=2.4)
Length = 571
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Frame = +1
Query: 334 PKQLYVAMTSDRG-LCGAVHTGVSKV------IRNRLNEPGAENIKVICVGDKSRSILQR 492
P++L++ S G + AV+TG+S+V +R + IK + D+ + +
Sbjct: 447 PRRLFIIDHSLEGWITNAVYTGISRVRLAGQIVRVIPPDDTPARIKRYAIDDRQKGRTKY 506
Query: 493 LYSKHIISVANEIGRLPPTFLDAAQLATAILNSGY 597
H+++V N +G + T +L GY
Sbjct: 507 TGPHHVLTVDNVLGMIADAEKKYTLCGTQLLLQGY 541
>SB_43| Best HMM Match : Motile_Sperm (HMM E-Value=0.61)
Length = 662
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 482 MLRDLSPTQITLIFSAPGSLSRLRITFETPVWTAPHSPLSEV 357
MLR + QIT++F AP S + T V PH P E+
Sbjct: 89 MLRPMQEVQITVVFRAPKSQGVVDSTLSMTV--LPHGPDYEI 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,361,546
Number of Sequences: 59808
Number of extensions: 483314
Number of successful extensions: 1382
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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