Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B04
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 203 8e-53
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 203 8e-53
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 174 4e-44
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 31 0.96
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 30 1.7
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 30 1.7
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.9
U61950-7|AAL02467.1| 395|Caenorhabditis elegans Nuclear hormone... 29 3.9
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 29 3.9
U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone... 29 3.9
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.9
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 29 3.9
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 29 3.9
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 29 3.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 5.1
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 28 6.8
U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 28 6.8
AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 28 6.8
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 9.0
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 27 9.0
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 203 bits (496), Expect = 8e-53
Identities = 103/184 (55%), Positives = 133/184 (72%), Gaps = 4/184 (2%)
Frame = +1
Query: 121 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 300
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 301 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 468
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 469 KSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAILNSGYEFASGKIVYXKFKSVVS 648
KSR+ LQRLY+ I+ NEIGR PP+F DA+ A AIL+SGY+F +G I++ +FK+VVS
Sbjct: 138 KSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVS 197
Query: 649 YAQS 660
Y S
Sbjct: 198 YETS 201
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 203 bits (496), Expect = 8e-53
Identities = 103/184 (55%), Positives = 133/184 (72%), Gaps = 4/184 (2%)
Frame = +1
Query: 121 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 300
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 301 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 468
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 469 KSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAILNSGYEFASGKIVYXKFKSVVS 648
KSR+ LQRLY+ I+ NEIGR PP+F DA+ A AIL+SGY+F +G I++ +FK+VVS
Sbjct: 138 KSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVS 197
Query: 649 YAQS 660
Y S
Sbjct: 198 YETS 201
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 174 bits (424), Expect = 4e-44
Identities = 90/161 (55%), Positives = 114/161 (70%), Gaps = 4/161 (2%)
Frame = +1
Query: 121 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 300
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 301 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 468
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 469 KSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAILNS 591
KSR+ LQRLY+ I+ NEIGR PP+F DA+ A AIL +
Sbjct: 138 KSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILKA 178
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 30.7 bits (66), Expect = 0.96
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 386 STPVSRR*SATGST--NPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWT 559
ST + +TGST NP + S +S T P AS STAN S+ + S +
Sbjct: 847 STQTNSNTGSTGSTVTNPPVSSSTSGSSSTQPIAS---STANPGSSTSGTTVVTTQGSSS 903
Query: 560 RLSSRPQSLTLGTSSLPARLSXTNSSLSS 646
++ T T + P+ S T++S S+
Sbjct: 904 TQTNPNTGSTGSTVTQPSAFSSTSASSST 932
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 416 TGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
TGST+ + +S++ TSP+ + ST S+ + + P + T S T G
Sbjct: 826 TGSTSAPQSSTAVSSTTTSPSTTTG-STPAPQSSTVASTTTVSPYTTTECICTTVSNTFG 884
Query: 596 TSSLPARLSXTNSSLSSPMLS 658
TS+ S + S +S +S
Sbjct: 885 TSTTQGLTSSSAQSTASTGVS 905
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +2
Query: 452 LSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTN 631
L++S AS VST +S+ + S++ P+S T S++P + + TS+ +S +
Sbjct: 891 LTSSSAQSTASTGVSTVASSTTIPQGSSSSSPQSPT--SAQP-AQSSSTSAATVTVSSSQ 947
Query: 632 SSLSSP 649
S SSP
Sbjct: 948 SPTSSP 953
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 453 YLRRRQVPQHLATSLQQTHHQRC 521
YLRR +P HL + + + HH RC
Sbjct: 1510 YLRRLSLPSHLFSWIAERHHIRC 1532
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 331 DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAEN 444
+PK+L + +RGL VS +++NRLNE G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 331 DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAEN 444
+PK+L + +RGL VS +++NRLNE G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 566 SS 571
SS
Sbjct: 711 SS 712
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 566 SS 571
SS
Sbjct: 711 SS 712
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 566 SS 571
SS
Sbjct: 711 SS 712
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 386 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 565
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 566 SS 571
SS
Sbjct: 711 SS 712
>U61950-7|AAL02467.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform c protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 GSTNPELRISRLSASETSPAASCNVSTAN-TSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
G NP+ S E P +C VS AN S + SA+ + LS+ S + G
Sbjct: 29 GGMNPKHVREERSKIERMPGNTCTVSAANGVSHSSSAASASPEHKFSFSLSTIAPSTSTG 88
Query: 596 ---TSSLPARLSXTNSS 637
+ S PA + TNSS
Sbjct: 89 SFSSGSQPAPIESTNSS 105
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 GSTNPELRISRLSASETSPAASCNVSTAN-TSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
G NP+ S E P +C VS AN S + SA+ + LS+ S + G
Sbjct: 162 GGMNPKHVREERSKIERMPGNTCTVSAANGVSHSSSAASASPEHKFSFSLSTIAPSTSTG 221
Query: 596 ---TSSLPARLSXTNSS 637
+ S PA + TNSS
Sbjct: 222 SFSSGSQPAPIESTNSS 238
>U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform b protein.
Length = 576
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 GSTNPELRISRLSASETSPAASCNVSTAN-TSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
G NP+ S E P +C VS AN S + SA+ + LS+ S + G
Sbjct: 210 GGMNPKHVREERSKIERMPGNTCTVSAANGVSHSSSAASASPEHKFSFSLSTIAPSTSTG 269
Query: 596 ---TSSLPARLSXTNSS 637
+ S PA + TNSS
Sbjct: 270 SFSSGSQPAPIESTNSS 286
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 423 EPVADHLRDTGVDSTTQSSVRGHSDVEL 340
EP+A HL+ +G+D T SS D +L
Sbjct: 273 EPIATHLKSSGLDVTFVSSAMSQKDRQL 300
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 423 EPVADHLRDTGVDSTTQSSVRGHSDVEL 340
EP+A HL+ +G+D T SS D +L
Sbjct: 273 EPIATHLKSSGLDVTFVSSAMSQKDRQL 300
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 GSTNPELRISRLSASETSPAASCNVSTAN-TSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
G NP+ S E P +C VS AN S + SA+ + LS+ S + G
Sbjct: 159 GGMNPKHVREERSKIERMPGNTCTVSAANGVSHSSSAASASPEHKFSFSLSTIAPSTSTG 218
Query: 596 ---TSSLPARLSXTNSS 637
+ S PA + TNSS
Sbjct: 219 SFSSGSQPAPIESTNSS 235
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 GSTNPELRISRLSASETSPAASCNVSTAN-TSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
G NP+ S E P +C VS AN S + SA+ + LS+ S + G
Sbjct: 168 GGMNPKHVREERSKIERMPGNTCTVSAANGVSHSSSAASASPEHKFSFSLSTIAPSTSTG 227
Query: 596 ---TSSLPARLSXTNSS 637
+ S PA + TNSS
Sbjct: 228 SFSSGSQPAPIESTNSS 244
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 GSTNPELRISRLSASETSPAASCNVSTAN-TSSALLMKSAACRPRSWTRLSSRPQSLTLG 595
G NP+ S E P +C VS AN S + SA+ + LS+ S + G
Sbjct: 161 GGMNPKHVREERSKIERMPGNTCTVSAANGVSHSSSAASASPEHKFSFSLSTIAPSTSTG 220
Query: 596 ---TSSLPARLSXTNSS 637
+ S PA + TNSS
Sbjct: 221 SFSSGSQPAPIESTNSS 237
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 5.1
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +2
Query: 377 VVLSTPVSRR*SATGSTNPELRISRLSASETSPAASCNV--STANTSSALLMKS------ 532
V STP+SRR SA P + + P+ S + S NTSS +++S
Sbjct: 782 VAPSTPLSRRMSAPVVRKPTMTAEKKREITMKPSVSTSARPSLINTSSHPMVRSPLPKMS 841
Query: 533 --AACRPRSWTRLSSRPQSLTLGTSSLPARL 619
+P TR + PQS T+ +S+ P+ L
Sbjct: 842 VLEKPKPLRITRPTVIPQSPTVTSSARPSGL 872
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 541 PPTFLDAAQLATAILNSGYEFASGKI 618
PPTF D + A + N GY F KI
Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKI 28
>U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family
protein 2 protein.
Length = 936
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = -3
Query: 525 ISNADDVFAVETLQDAAGLVSDADNLDILSSGFVEPV--ADHLRD-----TGVDSTTQSS 367
+S+ DD+F++ ++ + S DNL I+ S + P+ H + T + TTQ+S
Sbjct: 158 VSSYDDLFSLNVMKHLCQIDSIVDNL-IIESNYTNPIQALKHSLNIPYYTTCPNMTTQNS 216
Query: 366 VRGHSDVELL--RVILKGDYLSPFVELNSAFAI 274
++ ++L R +L+ ++ E+ SAF+I
Sbjct: 217 CEALNENDILNFRYLLQKCKINSTDEVCSAFSI 249
>AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical
protein Y46H3D.6 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 147 GHIPVLLVVDHRHRLGAYTRCDTTQHFHGFFQAFLIKIHQPTKYVAG 7
GHIP ++ H++ ++ +QHF FQ+ L I + K G
Sbjct: 120 GHIPKMIKYQEMHKMCSFDLQLVSQHFTSIFQS-LTPISEAQKVTLG 165
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 364 DRGLCGAVHTGVSKVIRNRLNEPGAENI-KVI---CVGDKSRSILQRLYSKHII 513
D G + T K++ ++ + PG ++ K+I C+G+ R +L+RL ++
Sbjct: 295 DNGEADYIFTRYDKIVDSKSDHPGVNSLDKLIAGMCMGELVRLVLERLCENKVL 348
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = +2
Query: 395 VSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSR 574
+ R S + S+ PE R R ++ +P V NTS+A+ ++ R +S+
Sbjct: 920 IERSHSVSMSSRPETRPERSYSTGQAPPELFKVGDDNTSTAVNLRRRFSAQRH--NVSTT 977
Query: 575 PQSLTLGTSSLPARLSXTNSSLSSPMLSL 661
S T + S T+SS+ + L L
Sbjct: 978 SSSGTGSGTCFATAASSTDSSIDASSLPL 1006
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 413 ATGSTNPELRISRLSASETSPAASCNVSTANT-----SSALLMKSAACRPRSWTRLSSRP 577
+T +T E+ + + + T P + STA+T S++ + S + P + T SS
Sbjct: 408 STSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSS 467
Query: 578 QSLTLGTSSLPARLSXTNSSLSS 646
S T+ T P T++S SS
Sbjct: 468 SSTTVTT---PTSTESTSTSPSS 487
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 413 ATGSTNPELRISRLSASETSPAASCNVSTANT-----SSALLMKSAACRPRSWTRLSSRP 577
+T +T E+ + + + T P + STA+T S++ + S + P + T SS
Sbjct: 408 STSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSS 467
Query: 578 QSLTLGTSSLPARLSXTNSSLSS 646
S T+ T P T++S SS
Sbjct: 468 SSTTVTT---PTSTESTSTSPSS 487
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = +2
Query: 395 VSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSR 574
+ R S + S+ PE R R ++ +P V NTS+A+ ++ R +S+
Sbjct: 920 IERSHSVSMSSRPETRPERSYSTGQAPPELFKVGDDNTSTAVNLRRRFSAQRH--NVSTT 977
Query: 575 PQSLTLGTSSLPARLSXTNSSLSSPMLSL 661
S T + S T+SS+ + L L
Sbjct: 978 SSSGTGSGTCFATAASSTDSSIDASSLPL 1006
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,284,833
Number of Sequences: 27780
Number of extensions: 327226
Number of successful extensions: 1170
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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