Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_B04
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    26   0.28 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    25   0.85 
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    25   0.85 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   2.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.0  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 642 DRLEFVIDNLAGSELVPRVKDCGR 571
           DRL FV++ + G +L+ +++ CG+
Sbjct: 58  DRLYFVMEYVNGGDLMYQIQQCGK 81


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 485 CNVSTANTSSALLMKSAACRPRSWTRLSSRPQS 583
           CN    +T++ ++      RP+ W RLS++  S
Sbjct: 75  CNEKQKHTANKVVNYLKTKRPKDWERLSAKYDS 107


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 485 CNVSTANTSSALLMKSAACRPRSWTRLSSRPQS 583
           CN    +T++ ++      RP+ W RLS++  S
Sbjct: 75  CNEKQKHTANKVVNYLKTKRPKDWERLSAKYDS 107


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 396 CLEGDPQPAQRTRS*EYQGYLRRRQVPQHLATS 494
           C+   P P Q   S +  G  RRR+ P++ + S
Sbjct: 389 CVACSPPPRQTPPSRKESGRRRRRRTPRYNSVS 421


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +2

Query: 458 ASETSPAASCNVSTANTSSALLMKSAA----CRPRSWTRLSSRPQSLTLGTSSLPAR 616
           A  T  +    V+T   ++ L   SA       P +    S+   ++T GT+++P R
Sbjct: 208 AGSTDASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIPTR 264



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 545 PRSWTRLSSRPQSLTLGTSSLPARLSXTNSSLSS 646
           P +  ++ SRP      ++SLPA ++ T ++ ++
Sbjct: 83  PGNLEQIGSRPLHPPASSTSLPATITTTTTTTTT 116


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 410 SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRP 547
           S+TGS+ P+L +S  +A  + P  +  VS  +  S   + SA   P
Sbjct: 361 SSTGSSIPKLNLS--TALMSQPPPNFGVSQVSPVSMSALVSAVRSP 404


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 441 EYQGYLRRRQVPQHLATSLQQ 503
           E++ YLR R   QH+    QQ
Sbjct: 8   EFRRYLRNRNQLQHVLEETQQ 28


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 78  SCRTGCMHPSGGGGQPPAEQEYGHT*SHLH 167
           +C +  ++PS  G  PP+   + H  S  H
Sbjct: 298 ACHSPGVYPSTAGFLPPSYHPHQHHPSQYH 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,445
Number of Sequences: 438
Number of extensions: 3964
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)