Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B04
(662 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial... 89 3e-18
At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast... 67 9e-12
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 64 6e-11
At2g01680.1 68415.m00095 ankyrin repeat family protein contains ... 31 0.68
At1g52660.1 68414.m05946 disease resistance protein, putative si... 30 1.6
At5g10060.1 68418.m01165 expressed protein 29 2.1
At3g51960.1 68416.m05699 bZIP family transcription factor contai... 28 4.8
At2g37520.1 68415.m04601 PHD finger family protein contains Pfam... 28 4.8
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 4.8
At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2) ident... 28 6.4
At2g33560.1 68415.m04113 spindle checkpoint protein-related simi... 28 6.4
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 28 6.4
At1g30800.1 68414.m03766 expressed protein ; expression supporte... 28 6.4
At1g16290.1 68414.m01950 expressed protein 28 6.4
At1g67220.1 68414.m07651 zinc finger protein-related similar to ... 27 8.4
>At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial
(ATPC) identical to SP|Q96250 ATP synthase gamma chain,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase
Length = 325
Score = 88.6 bits (210), Expect = 3e-18
Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Frame = +1
Query: 79 RVAPGVCTQAVAVV----NHQQNRNMATLKAISI-----RLKSVKNIQKITQSMKMVSAA 231
R+ P + + +A + + Q + +++IS R+KSVKNIQKIT++MKMV+A+
Sbjct: 12 RLLPSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQKITKAMKMVAAS 71
Query: 232 KYTRAERDLKAARPYGEGAVQFYERAEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVI 411
K + + +R + + D K + V ++SD+GLCG +++ V KV
Sbjct: 72 KLRAVQGRAENSRGLWQPFTALLGDNPSI---DVKKSVVVTLSSDKGLCGGINSTVVKVS 128
Query: 412 R--NRLNEPGAENIKVICVGDKSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAIL 585
R +LN + ++ + VG+K+++I+ R I+ E+ + P + + LA IL
Sbjct: 129 RALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDIL 188
Query: 586 NSGYEFASGKIVYXKFKSVVSY 651
+ EF + +IVY KF SVV++
Sbjct: 189 KN-VEFDALRIVYNKFHSVVAF 209
>At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast
(ATPC1) identical to SP|Q01908 ATP synthase gamma chain
1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}
Length = 373
Score = 67.3 bits (157), Expect = 9e-12
Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Frame = +1
Query: 145 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVVA 321
A+L+ + R+ SVKN QKIT++MK+V+AAK RA+ + RP+ E V+ Y E +
Sbjct: 51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ 110
Query: 322 LED----------DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIK--VICVG 465
+D K V +T DRGLCG + + K R+ E ++ VI VG
Sbjct: 111 TDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVG 170
Query: 466 DKSRS-ILQRLYSKHIISVANEIGRLPPTFLDAAQLATAI--LNSGYEFASGKIVYXKFK 636
K S L+R Y + E G L PT +A +A + L E +++Y KF
Sbjct: 171 KKGNSYFLRRPYIP--VDKYLEAGTL-PTAKEAQAVADDVFSLFISEEVDKVELLYTKFV 227
Query: 637 SVV 645
S+V
Sbjct: 228 SLV 230
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 64.5 bits (150), Expect = 6e-11
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Frame = +1
Query: 145 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVVA 321
A ++ + R+ SVKN QKIT++M++V+AA+ RA+ + RP+ E V+ Y +
Sbjct: 61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQ 120
Query: 322 LEDDPKQL----------YVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIK--VICVG 465
LED L V +T D+GLCG + V+K R+ E I VI VG
Sbjct: 121 LEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVG 180
Query: 466 DKSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAI--LNSGYEFASGKIVYXKFKS 639
K + R + + E G + PT +A +A + L E ++VY KF S
Sbjct: 181 KKGNAYFSR-RDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVS 239
Query: 640 VV 645
+V
Sbjct: 240 LV 241
>At2g01680.1 68415.m00095 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 532
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = -3
Query: 648 GD-DRLEFVIDNLAGSELVPRVKDCG--RELSRVQERGRQAADFIS---NADDVF 502
GD +L+ ++DNL G EL+ C EL VQ + A +IS N +D+F
Sbjct: 21 GDLSQLQQLVDNLTGDELIDESSPCSAVAELMSVQNDAGETAVYISAAENLEDIF 75
>At1g52660.1 68414.m05946 disease resistance protein, putative
similar to NBS/LRR disease resistance protein GI:9758302
from [Arabidopsis thaliana]
Length = 375
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -3
Query: 609 GSELVPRVKDCGRE-----LSRVQERGRQAADFISNADDVFAVETLQDAAGLVSDADNLD 445
G+ ++ RVK C + L +VQ RQA I A++ F + + ++GL+S + ++
Sbjct: 36 GNNVMKRVKLCEEQQQMKRLDKVQTWLRQADTVIKEAEEYFLMSSSSSSSGLISSSHKME 95
>At5g10060.1 68418.m01165 expressed protein
Length = 469
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 458 ASETSPAASCNVSTANTSSALLMKSAACRPRSWTRLSSRPQSLTLGTSSLPARLSXTNSS 637
AS+ +PA+ + TA+TSS ++M+S S+ +++ L+ S++P +S TN+S
Sbjct: 318 ASKMTPASIAAMLTASTSSHMIMQSVL---SSFAAEATKTSGLSKSESTVP--VSDTNAS 372
Query: 638 LSS 646
S
Sbjct: 373 FPS 375
>At3g51960.1 68416.m05699 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 227
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 42 LKTPEKSRENVESCRTGCMHPSGGGGQPPAEQEYGHT*SHLHSSQVCKEYSE-DHPVDEN 218
+K E+ ++ + GC H P + + HT H H+ + + E DH N
Sbjct: 38 IKMNEEEDKDQDRVTRGCSHTHSCNPPGPEDASHSHTCFHAHTHLIISDQQENDHSDSSN 97
>At2g37520.1 68415.m04601 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 854
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 519 NADDVFAVETLQDAAGLVSDAD---NLDILSSGFVEPVADHLRDTGVDSTT 376
+ D + ET+ D A +V + + D+L S FV + HL TG+ T
Sbjct: 84 SGSDFGSEETVSDDASVVGSSQTEQSSDVLPSRFVLEIPKHLSSTGITKIT 134
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 468 VSDADNLDILSSGFVEPVADHLR--DTGVDSTTQSSVR 361
VS + + L+SG +EP +HLR ++ QSSVR
Sbjct: 25 VSSNEEREKLASGLIEPFVNHLRVIESQASKRDQSSVR 62
>At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2) identical
to SP|Q9M9W8 Phospholipase D p2 (EC 3.1.4.4) (AtPLDp2)
(Phospholipase D2 PHOX and PX containing domain)
(Phospholipase D zeta 2) (PLDzeta2) {Arabidopsis
thaliana}; similar to phospholipase D GB:BAA24577 from
[Rattus norvegicus]; contains Pfam profile: PF00614
phospholipase D, PF00169 PH domain, PF00787 PX domain
Length = 1046
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +1
Query: 292 QFYERAEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGDK 471
Q Y ++++ ++D + + +DR L G+ + + VI ++ + N G
Sbjct: 848 QIYVHSKLMIVDDRIAVIGSSNINDRSLLGSRDSEIGVVIEDKEFVESSMNGMKWMAGKF 907
Query: 472 SRSILQRLYSKHIISVANEIGRLPPTFLDA 561
S S+ L+S+H+ A EI ++ DA
Sbjct: 908 SYSLRCSLWSEHLGLHAGEIQKIEDPIKDA 937
>At2g33560.1 68415.m04113 spindle checkpoint protein-related similar
to spindle checkpoint protein BubR1 (GI:22128593)
[Xenopus laevis]; similar to Mitotic checkpoint
serine/threonine-protein kinase BUB1 beta (EC 2.7.1.-)
(MAD3/BUB1-related protein kinase) (Mitotic checkpoint
kinase MAD3L) (Swiss-Prot:Q9Z1S0) [Mus musculus]
Length = 395
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 404 R*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPR--SWTRLSSRP 577
R A GS+NP+ + + + S +P A + ++T+S +S RP SW L R
Sbjct: 241 RRQALGSSNPQAKKLKPNQSSKTPFAIYADAVSDTTSGNQPESDKSRPEFGSWLMLGGRA 300
Query: 578 QSLTLGTSSLPAR 616
+ +SLP +
Sbjct: 301 ER-NKENNSLPRK 312
>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
protein / PEP carboxylase family protein similar to
SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 1032
Score = 27.9 bits (59), Expect = 6.4
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 13/78 (16%)
Frame = -3
Query: 645 DDRLEFVIDNLAGSE-LVPRVKDCGRELSRVQERGRQAADF------------ISNADDV 505
+ +LEF+ L G LVP+ G ++ V + R AA+ SNA DV
Sbjct: 562 EKKLEFLTRELKGKRPLVPQCIKVGPDVKEVLDTFRVAAELGSESLGAYVISMASNASDV 621
Query: 504 FAVETLQDAAGLVSDADN 451
AVE LQ A L +++
Sbjct: 622 LAVELLQKDARLALTSEH 639
>At1g30800.1 68414.m03766 expressed protein ; expression supported
by MPSS
Length = 239
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 537 AADFISNADDVFAVETLQDAAGLVSDADNLDILSS 433
AADF+S DD F + L + SD D+ DI SS
Sbjct: 53 AADFLSAVDDQFGI-PLSATIFIPSDFDSADISSS 86
>At1g16290.1 68414.m01950 expressed protein
Length = 419
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -3
Query: 447 DILSSGFVEPVADHLRDTGVDSTTQSSVRGHSDVELLRVILKGDYLSPFVEL--NSAFAI 274
D + FV + H+ GVD +T S + RV D PF+ + A+ +
Sbjct: 302 DTVCMRFVNGIKKHVGILGVDYSTASWLYSELGYRAYRVDSADDLTKPFISMYFGVAYLV 361
Query: 273 WTS 265
W S
Sbjct: 362 WLS 364
>At1g67220.1 68414.m07651 zinc finger protein-related similar to
SP|Q09472 E1A-associated protein p300 {Homo sapiens},
SP|Q92793 CREB-binding protein {Homo sapiens}; contains
Pfam profiles PF00569: Zinc finger ZZ type, PF00628:
PHD-finger, PF02135: TAZ zinc finger
Length = 1357
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 144 HIPVLLVVDHRHRLGAYTRCDTTQHFHGF 58
+ P LL D+R G YT+ T +H H F
Sbjct: 1237 YFPCLLCPDYRACTGCYTKNRTLRHLHIF 1265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,524,179
Number of Sequences: 28952
Number of extensions: 310598
Number of successful extensions: 987
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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