Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B03
(429 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 139 3e-32
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 136 1e-31
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 116 2e-25
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 114 6e-25
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 112 3e-24
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 111 4e-24
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 110 1e-23
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 102 3e-21
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 100 1e-20
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 100 1e-20
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 95 7e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 95 7e-19
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 94 1e-18
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 85 8e-16
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 55 7e-07
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 40 0.029
UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.27
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 36 0.36
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 36 0.47
UniRef50_A0CQ05 Cluster: Chromosome undetermined scaffold_237, w... 35 0.82
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 34 1.4
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 34 1.4
UniRef50_Q1DDG8 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 33 1.9
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 3.3
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4; Muri... 33 3.3
UniRef50_Q07GA2 Cluster: Novel protein similar to H1 histone fam... 32 4.4
UniRef50_Q2RNV8 Cluster: Penicillin-binding protein 1A; n=1; Rho... 32 4.4
UniRef50_Q4RC99 Cluster: Chromosome undetermined SCAF19436, whol... 32 5.8
UniRef50_Q39Y55 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A5D4Y8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A0AE13 Cluster: Putative mannitol dehydrogenase protein... 32 5.8
UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_P02851 Cluster: Balbiani ring protein 2; n=1; Chironomu... 32 5.8
UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein prec... 31 7.7
UniRef50_Q1K398 Cluster: Hydroxyacylglutathione hydrolase; n=1; ... 31 7.7
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 139 bits (336), Expect = 3e-32
Identities = 71/114 (62%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 70 MKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALD 129
Query: 186 APTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
+P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E AR R S
Sbjct: 130 SPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRAS 183
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 136 bits (330), Expect = 1e-31
Identities = 70/109 (64%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Frame = +3
Query: 21 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGR 200
+EG I VVVG V++D+R+Y VP + V AL TE ARARI AGGE LTFDQLALR P
Sbjct: 71 KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-T 129
Query: 201 KTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG E AR R+S
Sbjct: 130 DTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKS 178
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 116 bits (280), Expect = 2e-25
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Frame = +3
Query: 33 IAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVL 212
+AVVVG++++D RL++ M V AL TE AR RI+ AGGE LTFDQLALR PTG+ +L
Sbjct: 134 VAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCIL 193
Query: 213 VQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
++G AR A +HFG APG P+S +PYVR+KG E AR R+S
Sbjct: 194 LRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGRKFEKARGRRKS 238
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 114 bits (275), Expect = 6e-25
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = +3
Query: 33 IAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVL 212
IAVVVG V +DVR+ +P M V AL ++ AR I+AAGGE LTFDQLA+ APTG+ T L
Sbjct: 86 IAVVVGDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYL 145
Query: 213 VQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHARPSR 335
++GR++ RE+VRHFG A G P SH+KPY +G E R R
Sbjct: 146 LRGRKSGRESVRHFG-ASGVPGSHSKPYATNRGKETKRGRR 185
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 112 bits (270), Expect = 3e-24
Identities = 63/115 (54%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 HMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLAL 182
HM+K R AVVVGTV+ND R+ VPK++V AL VTE AR RILA+GGE+LTFDQL
Sbjct: 70 HMEK--RPDNTAVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVA 127
Query: 183 RAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
R+PTG + L++G AREAV+HF + + KPYVR+KG E AR R S
Sbjct: 128 RSPTGSRCTLLRGATKAREAVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 179
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 111 bits (268), Expect = 4e-24
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+ GG+ LTFDQLAL
Sbjct: 106 MKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALD 165
Query: 186 APTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHAR 326
+P TVL+ G R RE HF A G P SHTKPYVR+KG E+AR
Sbjct: 166 SPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRKFEYAR 214
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 110 bits (265), Expect = 1e-23
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +3
Query: 39 VVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQ 218
VVVGTV++D RL TVPK+ V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++
Sbjct: 297 VVVGTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLR 356
Query: 219 GRRNAREAVRHFGPAPGAPRSHTKPYV 299
G + REA++HFG A G P SH KPYV
Sbjct: 357 GPK-VREALKHFGRAAGLPGSHAKPYV 382
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 102 bits (245), Expect = 3e-21
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = +3
Query: 39 VVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQ 218
VVVGTV++D R++ PK TVAAL T ARA+I+ AGGE +T DQLA+RAP G+ T++++
Sbjct: 82 VVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILR 141
Query: 219 GRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
G RN+REAVRHFG P ++ P + + G E AR RRS
Sbjct: 142 GPRNSREAVRHFGMGPHKGKA---PRILSTGRKFERARGRRRS 181
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 100 bits (240), Expect = 1e-20
Identities = 51/102 (50%), Positives = 64/102 (62%)
Frame = +3
Query: 21 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGR 200
RE IAVV TV+ND RL T+P+MT+ AL + AR+RI AGG ++FD+L PTG
Sbjct: 74 REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKPTGD 133
Query: 201 KTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHAR 326
VL+QGRR+ R + FG +PG P SH KP KG AR
Sbjct: 134 NCVLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGAR 174
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 100 bits (240), Expect = 1e-20
Identities = 54/87 (62%), Positives = 64/87 (73%)
Frame = +3
Query: 39 VVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQ 218
VVVGTV++DVRL TVPK+ V TE AR RILAAGG+ LTFDQLA + PTG T+L++
Sbjct: 377 VVVGTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLR 432
Query: 219 GRRNAREAVRHFGPAPGAPRSHTKPYV 299
G R RE ++HFG A G P SH KPYV
Sbjct: 433 GPR-VREELKHFGRAAGLPGSHAKPYV 458
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 94.7 bits (225), Expect = 7e-19
Identities = 44/81 (54%), Positives = 62/81 (76%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
M K REG AVVVG +++DVR++ +PK+ + AL VT +ARARI+ AGGEI+TFDQLAL+
Sbjct: 40 MNKDGREGKTAVVVGCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQ 99
Query: 186 APTGRKTVLVQGRRNAREAVR 248
+P G+ TVL+QG ++ + R
Sbjct: 100 SPKGQNTVLMQGFKSETDMER 120
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 94.7 bits (225), Expect = 7e-19
Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 60 NDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNARE 239
+D R+ VPK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 240 AVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
AV+HF + + KPYVR+KG E AR R S
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 217
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 93.9 bits (223), Expect = 1e-18
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
MKK E AV V TV+ D R Y VPKM V AL T+ A A I AGG+ L FD+LAL+
Sbjct: 70 MKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALK 126
Query: 186 APTGRKTVLVQGRRNAREAVRHFG 257
APTGRKTVL++G+RN REA++HFG
Sbjct: 127 APTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 84.6 bits (200), Expect = 8e-16
Identities = 44/102 (43%), Positives = 63/102 (61%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A G+IL+FDQLA+
Sbjct: 58 MKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMT 117
Query: 186 APTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKG 311
+P +G + + RH G G+P S+ KPYV + G
Sbjct: 118 SP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 54.8 bits (126), Expect = 7e-07
Identities = 32/98 (32%), Positives = 47/98 (47%)
Frame = +3
Query: 33 IAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVL 212
+AVVV V +D + +P + V AL ++ + +I GG I T DQL P L
Sbjct: 82 VAVVVAKVLDDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMDDICL 141
Query: 213 VQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHAR 326
V + +R + + +GPAPG S T P K H +
Sbjct: 142 VSTNKFSRRSAKFWGPAPGEKGSTTYPRANQKCHNREK 179
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 39.5 bits (88), Expect = 0.029
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
+ + +EG + VV G + +L K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 186 APTG 197
P G
Sbjct: 112 YPRG 115
>UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 740
Score = 36.3 bits (80), Expect = 0.27
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 177 ALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHARPSRRSN 344
A RAP G L+ R AR + R P P PR+ T+P+ + AR SRR +
Sbjct: 668 ATRAPFGACAALIARARGARRSRRARAP-PRTPRTATRPHAARRRGRRARRSRRGS 722
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 35.9 bits (79), Expect = 0.36
Identities = 14/63 (22%), Positives = 34/63 (53%)
Frame = +3
Query: 39 VVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQ 218
+ V + ND R+ PK+ + AL+ + + +I+ GG+I +++ + K + ++
Sbjct: 104 LTVSKILNDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIR 163
Query: 219 GRR 227
G++
Sbjct: 164 GKK 166
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 35.5 bits (78), Expect = 0.47
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 18 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTG 197
T+EG + VV G V + K+T+ ++ A ++L++GG + F +L PTG
Sbjct: 62 TKEGDVVVVPGRVLGTGSM--PHKITLCPFGISGAAAEKVLSSGGRVTGFAELTKEFPTG 119
Query: 198 RKTVLV 215
+ VL+
Sbjct: 120 KGVVLL 125
>UniRef50_A0CQ05 Cluster: Chromosome undetermined scaffold_237,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 978
Score = 34.7 bits (76), Expect = 0.82
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 275 RCTRRRPEVTNCLTSITATLN-QYCLTSS 192
RC ++ P + NC+TS+T N + CLTSS
Sbjct: 728 RCIKKAPSIKNCVTSVTKISNIEICLTSS 756
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 33.9 bits (74), Expect = 1.4
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 21 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 137
++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 74 KKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 33.9 bits (74), Expect = 1.4
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 21 REGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 137
++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 74 KKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q1DDG8 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 410
Score = 33.5 bits (73), Expect = 1.9
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -3
Query: 283 CERGAPGAGPK*RTASRALRRP*TSTVLRPVGARRANWSNVRISPPAAKM 134
C R PGAGP+ + RRP L P+GA RA + P A M
Sbjct: 145 CGRRGPGAGPRGALGAAGRRRPARGRGLSPLGAGRAGGAGGAALPRARGM 194
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 33.5 bits (73), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
+ + T E + VV G V +L K+TVAA +E A+ + AGG +T +L
Sbjct: 52 LNRYTEENHVVVVPGKVLGSGKL--AHKITVAAFSFSEGAKKAVEEAGGRCITIKELINE 109
Query: 186 APTG 197
P G
Sbjct: 110 NPKG 113
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 32.7 bits (71), Expect = 3.3
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 6 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 107
MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 5 MKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 3.3
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 18 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 140
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4;
Murinae|Rep: Nuclear transition protein 2 - Mus musculus
(Mouse)
Length = 117
Score = 32.7 bits (71), Expect = 3.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 258 PAPGAPRSHTKPYVRTKGHEHARPSRRSN 344
P+PG P H KP V ++ H ARPS R +
Sbjct: 53 PSPGPPMKHPKPSVHSR-HSPARPSHRGS 80
>UniRef50_Q07GA2 Cluster: Novel protein similar to H1 histone
family, member X h1fx; n=2; Xenopus tropicalis|Rep:
Novel protein similar to H1 histone family, member X
h1fx - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 212
Score = 32.3 bits (70), Expect = 4.4
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 213 VQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHARPSR 335
+QGR+ A R AP APR HTK + KGH+ A P +
Sbjct: 115 MQGRKKPSVAKRPVSKAPRAPRGHTKSH--AKGHK-ASPKK 152
>UniRef50_Q2RNV8 Cluster: Penicillin-binding protein 1A; n=1;
Rhodospirillum rubrum ATCC 11170|Rep: Penicillin-binding
protein 1A - Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255)
Length = 651
Score = 32.3 bits (70), Expect = 4.4
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 117 EKARARILAAGGEILTFDQLAL--RAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTK 290
E A A +LA G + Q AL AP G T +V GR +A A P S K
Sbjct: 364 EAAVAGLLAEKGAAMKASQAALVALAPDGAVTAMVGGRDHATSPFNRAAQARRQPGSAFK 423
Query: 291 PYVRTKGHE 317
P+V G E
Sbjct: 424 PFVFLAGLE 432
>UniRef50_Q4RC99 Cluster: Chromosome undetermined SCAF19436, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF19436,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 139
Score = 31.9 bits (69), Expect = 5.8
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 177 ALRAPTGRKTVLVQGRRNAREAVRHFGP----APGAPRSHTKPYVRTKGHEHARPS 332
AL A G + V+ RR ++ VRH GP P P P + K H H P+
Sbjct: 45 ALAALCGHRQADVRVRRRIQDPVRHPGPGRRITPLPPHQIKLPIITKKTHHHTNPT 100
>UniRef50_Q39Y55 Cluster: Putative uncharacterized protein; n=1;
Geobacter metallireducens GS-15|Rep: Putative
uncharacterized protein - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 1284
Score = 31.9 bits (69), Expect = 5.8
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = -2
Query: 314 VSLGAHVWFSM*TRCTRRRPEVTNCLTSITATLNQYCLTSSGRTEG*LVKR*NLTSSSQD 135
V+ G + FS T T + + TSITA + SS T V NLTS D
Sbjct: 572 VTGGKYGAFSCTTCHTMKSANIKRVRTSITAPFGNW---SSSGTPSVSVSFTNLTSMGHD 628
Query: 134 AGTSFLSNV*CGYCHFRN 81
SN C CH RN
Sbjct: 629 DDNHTTSNRVCEVCHNRN 646
>UniRef50_A5D4Y8 Cluster: Putative uncharacterized protein; n=1;
Pelotomaculum thermopropionicum SI|Rep: Putative
uncharacterized protein - Pelotomaculum
thermopropionicum SI
Length = 104
Score = 31.9 bits (69), Expect = 5.8
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +3
Query: 153 EILTFDQLALRAPTG--RKTVLVQGRRNAREAVR------HFGPAPGAPRSHTKPYVRTK 308
E ++Q+A P+ R+ +L + R R A R HFG PG P PY K
Sbjct: 40 EAALYEQIAQAVPSEELRQIILHKARHERRMAERLSKLSHHFGLMPGTPAGPPMPYTAGK 99
Query: 309 GHE 317
G E
Sbjct: 100 GEE 102
>UniRef50_A0AE13 Cluster: Putative mannitol dehydrogenase protein;
n=1; Streptomyces ambofaciens ATCC 23877|Rep: Putative
mannitol dehydrogenase protein - Streptomyces
ambofaciens ATCC 23877
Length = 502
Score = 31.9 bits (69), Expect = 5.8
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 36 AVVVGTVSNDV-RLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLA--LRAPTGRKT 206
A+ +G+ + V L T P++TV L VTEK R A GG T +A L A G
Sbjct: 104 ALALGSDAKAVDALLTDPEVTVVTLTVTEKGYHRSPATGGLDTTAAPVAADLAAAPGGPL 163
Query: 207 VLVQGRRNAREAVRHFGPAP 266
V GR A A R AP
Sbjct: 164 TTVVGRLAAGLAARMRAGAP 183
>UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1248
Score = 31.9 bits (69), Expect = 5.8
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Frame = +1
Query: 190 PLDVRQYW---------FRVAVMLVRQFVTSGRRLVHLVHILNHTCAPRDTSTHGRAVAP 342
PL QYW + V + LVRQ T +RL+H+V L+ A RDT+ G A P
Sbjct: 162 PLTSSQYWDTFANLPALYTVYLALVRQLDTMLQRLIHIVEELH--LATRDTANSGAAYNP 219
>UniRef50_P02851 Cluster: Balbiani ring protein 2; n=1; Chironomus
tentans|Rep: Balbiani ring protein 2 - Chironomus
tentans (Midge)
Length = 210
Score = 31.9 bits (69), Expect = 5.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 177 ALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHARPSRRS 341
A++ K GR N++ P P H+KP +K +H++PS+ S
Sbjct: 33 AMKRTEAAKCARKNGRFNSKRCTCTSVGKPSKPSKHSKPSKHSKPSKHSKPSKHS 87
Score = 31.9 bits (69), Expect = 5.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 177 ALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHARPSRRS 341
A++ K GR N++ P P H+KP +K +H++PS+ S
Sbjct: 107 AMKRTEAAKCARKNGRFNSKRCTCTSVGKPSKPSKHSKPSKHSKPSKHSKPSKHS 161
>UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein
precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Alpha-2-macroglobulin-like protein precursor -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 1759
Score = 31.5 bits (68), Expect = 7.7
Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Frame = +3
Query: 15 PTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRA-- 188
P ++V + + ++T+ + AL V E RA LA GG L +LA+
Sbjct: 1157 PGDRSFLSVSLDNIDGPAGVWTLAAVGEGALSVPEGPRAVDLAKGGRDLV--RLAVEGLN 1214
Query: 189 --PTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEHAR 326
P + + RE F PGAPR + GH AR
Sbjct: 1215 PGPGTLRLAITAPTGERREKTWSFDVRPGAPRMTLAHRLDLGGHGRAR 1262
>UniRef50_Q1K398 Cluster: Hydroxyacylglutathione hydrolase; n=1;
Desulfuromonas acetoxidans DSM 684|Rep:
Hydroxyacylglutathione hydrolase - Desulfuromonas
acetoxidans DSM 684
Length = 249
Score = 31.5 bits (68), Expect = 7.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 225 GDPEPVLSYVQWAHGGLTGQTLESHLQQPRCGHELS 118
G+ EPVL Y++ HG L +H+ Q CG L+
Sbjct: 30 GEAEPVLDYLE-KHGRSLSLILNTHMHQDHCGGNLT 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,347,106
Number of Sequences: 1657284
Number of extensions: 7938807
Number of successful extensions: 23696
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 22989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23674
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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