Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_B03
         (429 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021492-6|CAA16387.1|  188|Caenorhabditis elegans Hypothetical ...   149   1e-36
Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z48795-6|CAA88730.1|  203|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    26   10.0 

>AL021492-6|CAA16387.1|  188|Caenorhabditis elegans Hypothetical
           protein Y45F10D.12 protein.
          Length = 188

 Score =  149 bits (360), Expect = 1e-36
 Identities = 73/114 (64%), Positives = 87/114 (76%), Gaps = 2/114 (1%)
 Frame = +3

Query: 6   MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 185
           ++K   E    V + TV++D RLYTVPK++VAALHVTE ARARILAAGGEI+T DQLAL+
Sbjct: 70  VQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEIITLDQLALK 129

Query: 186 APTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EHARPSRRS 341
           +P G  TV +QG R+AREA +HFGPAPG P SHTKPYVR+KG   E AR  R S
Sbjct: 130 SPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRAS 183


>Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical
           protein M03C11.4 protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 348 RHWSDGSAVRARVPWCARMV*YVNEVHQAPARSDELPHEHYGDPEPVLSY 199
           R+ SDG AV  ++ +   M     E+  AP    E+ ++H+GD E +  Y
Sbjct: 144 RYISDGLAV-VKMTFLKNM----QEISTAPRYEPEMVYQHFGDEETIFGY 188


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 112 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMW 2
           T S +TV +G+  + TS  ++ TT+A KPS    FM+
Sbjct: 615 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMY 651


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 112 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMW 2
           T S +TV +G+  + TS  ++ TT+A KPS    FM+
Sbjct: 822 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMY 858


>Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical
           protein D1054.9b protein.
          Length = 559

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 162 TFDQLALRAPTGRKTVLVQGRRNAREAVRHF--GPAPGAPRSHTKPYVRTKGHEHA 323
           T+ QL      G K V    R++A  +V HF  GP P  P+    PY R   H  A
Sbjct: 463 TWQQLRTGLDRGVKAV----RQSAESSVTHFNYGPQPPQPQPVQIPYHRQHHHHPA 514


>Z48795-6|CAA88730.1|  203|Caenorhabditis elegans Hypothetical
           protein R05H5.7 protein.
          Length = 203

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 260 RPEVTNCLTSITATLNQYCLTSSG 189
           RP  TNC  S   + NQ C+ S+G
Sbjct: 101 RPHHTNCQQSGQCSSNQLCIDSNG 124


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
            ZC84.1 protein.
          Length = 1556

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 125  SFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLAC 18
            S+L+N   G+C   NSV P       +D S Q  AC
Sbjct: 933  SYLANAFQGFCCTANSVCPDNADYLIDDQSQQPRAC 968


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,082,960
Number of Sequences: 27780
Number of extensions: 182522
Number of successful extensions: 469
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)