Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_B01
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 32 0.23
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 31 0.72
At1g11915.1 68414.m01375 expressed protein 30 1.2
At1g02580.1 68414.m00209 maternal embryogenesis control protein ... 30 1.2
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 1.7
At5g22150.1 68418.m02579 hypothetical protein 29 2.9
At4g17565.1 68417.m02626 F-box family protein contains F-box dom... 29 2.9
At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1) domain... 29 2.9
At5g65210.2 68418.m08204 bZIP family transcription factor (TGA1)... 28 3.8
At5g65210.1 68418.m08203 bZIP family transcription factor (TGA1)... 28 3.8
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 28 3.8
At5g38330.1 68418.m04626 plant defensin-fusion protein, putative... 28 5.0
At5g23280.1 68418.m02724 TCP family transcription factor, putati... 28 5.0
At5g48490.1 68418.m05996 protease inhibitor/seed storage/lipid t... 27 8.8
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 27 8.8
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 8.8
At4g32100.1 68417.m04567 hypothetical protein 27 8.8
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 32.3 bits (70), Expect = 0.23
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 77 CVSKCASGSCPPTLPIDMCEPACGPSTPCNETQLCCPTACG 199
C S C SG CPP L + + C C T + P +CG
Sbjct: 616 CESLCHSGHCPPCLEMIFTDLTCA----CGRTSIPPPLSCG 652
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 30.7 bits (66), Expect = 0.72
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Frame = +2
Query: 101 SCPPTLPIDMCEPACGPSTPCNETQLCCPTACG-GAMCVDAMSQRHFV-TLVKKGRCPEY 274
SC P C CG PC + CC CG C + H + + +CP +
Sbjct: 604 SCKQYTPCG-CLSMCGKDCPCLTNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCF 662
Query: 275 PRG----PWICTH--MCTGDSDCPRTLKCCQNRCG 361
G P +C + + GD + + +CG
Sbjct: 663 AAGRECDPDVCRNCWVSCGDGSLGEAPRRGEGQCG 697
>At1g11915.1 68414.m01375 expressed protein
Length = 329
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 176 LCCPTACGGAMCVDAMSQRHFVTLVKKGRCPEYPRGPWICTHMCTG 313
LC T GG +C R F+ L K+G Y + P + H G
Sbjct: 238 LCQETTKGGGVCGFNTRTRDFLCLCKQGNVTTYCKDPSLVNHKRVG 283
>At1g02580.1 68414.m00209 maternal embryogenesis control protein /
MEDEA (MEA) nearly identical to MEDEA GB:AAC39446
GI:3089625 from [Arabidopsis thaliana]; contains Pfam
profile PF00856: SET domain
Length = 689
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +2
Query: 77 CVSKCASGSCPPTLPIDMCEPACGPSTPCNETQLCCPTACG 199
C SKC CP + CE CG S CN C A G
Sbjct: 452 CKSKCGQ-QCPCLTHENCCEKYCGCSKDCNNRFGGCNCAIG 491
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 41 YFVLFTIVSSLVCVSKCASGSCPPTLPIDMC 133
Y +L + L +S A CP + P+D+C
Sbjct: 1096 YHLLLVFLIGLCVISSIAGAICPTSFPVDLC 1126
>At5g22150.1 68418.m02579 hypothetical protein
Length = 330
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +2
Query: 92 ASGSCPP-----TLPIDMCEPACGPSTPCNETQLCCPTACGGAMCVDAM 223
AS PP + PI P G C ET +CC CG + A+
Sbjct: 17 ASSDMPPRRRWWSRPIVTLPPTNGRRATCKETTVCCIPFCGAIFTIIAV 65
>At4g17565.1 68417.m02626 F-box family protein contains F-box domain
Pfam:PF00646
Length = 378
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 112 WRARP*CTFRHADQTRYDCKQHKIIEH 32
WR P C R DQ Y+ K HK+ ++
Sbjct: 188 WRFAPACHIRMKDQIIYNHKDHKVYQY 214
>At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein Pfam profile PF00564: PB1
domain
Length = 720
Score = 28.7 bits (61), Expect = 2.9
Identities = 27/88 (30%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Frame = -1
Query: 357 QRF*QHLRVLGQSESPVHMCVQIHGPRGYSGQRPFFTKVTKCL*DIASTH----IAPPQA 190
Q F QH L Q PV+ PR YS P V+ I S H + PP
Sbjct: 540 QSFHQHAGRLDQQPYPVYYVTAPVPPRPYSMPVPQSPSVSDAAGSIPSNHPNSTMMPPPP 599
Query: 189 VGQHNCVSLHGVEGPHAGSHISMGSVGG 106
VS E AG + + VGG
Sbjct: 600 NNHMRSVSSGKPEMGQAGVYTTAPGVGG 627
>At5g65210.2 68418.m08204 bZIP family transcription factor (TGA1)
identical to transcription factor (TGA1) GI:16550 from
[Arabidopsis thaliana]
Length = 368
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 216 STHIAPPQAVGQHNCVSLHGVEGPHAGSHISMGSV 112
STH PP+ VG + V G+ G S+IS G++
Sbjct: 5 STHFVPPRRVGIYEPVHQFGMWGESFKSNISNGTM 39
>At5g65210.1 68418.m08203 bZIP family transcription factor (TGA1)
identical to transcription factor (TGA1) GI:16550 from
[Arabidopsis thaliana]
Length = 368
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 216 STHIAPPQAVGQHNCVSLHGVEGPHAGSHISMGSV 112
STH PP+ VG + V G+ G S+IS G++
Sbjct: 5 STHFVPPRRVGIYEPVHQFGMWGESFKSNISNGTM 39
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 131 CEPACGPSTPCNETQLCCPTACG 199
C+ ACG PC CC CG
Sbjct: 657 CKIACGKECPCLLNGTCCEKYCG 679
>At5g38330.1 68418.m04626 plant defensin-fusion protein, putative
contains a plant defensin motif, personal communication,
Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)
Length = 122
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 77 CVSKCASGSCPPTLPIDMCEPACGPSTPCNETQLCCPTACGGAMCVDAMSQRH 235
C SKC P + + C CGP+ CN C +C C +QR+
Sbjct: 51 CESKCDG---PVGMLLCTCTYECGPTKLCNGGLGNCGESCNEQCCDRNCAQRY 100
>At5g23280.1 68418.m02724 TCP family transcription factor, putative
similar to PCF2 [(GI:2580440) Oryza sativa]
Length = 250
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 435 NQHSHSA-GDVETSSISASGFWQVSAPQRF*Q 343
N H+HS+ G ET + + +GFW V A F Q
Sbjct: 147 NSHNHSSVGKDETFTTTPAGFWAVPARPDFGQ 178
>At5g48490.1 68418.m05996 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 101
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 LTLEMFNYFVLFTIVSSLVCVSKCASGSCPPT-LPIDMCEPACGPSTPCNETQLCC 184
+T + V+ +++SLV A C T ++ C PA + P + + LCC
Sbjct: 1 MTSKKVAIMVIVMVMASLVVERSVAIDLCGMTQAELNECLPAVSKNNPTSPSLLCC 56
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +2
Query: 77 CVSKCASGSCPPTLPIDMCEPACGPSTPCNETQLCCPTACGGAMC 211
C +C G CPP C CG C + C + C C
Sbjct: 415 CRRRCCDGECPP------CSEICGKKLRCRNHK--CQSPCHQGPC 451
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 86 KCASGSCPPTLPIDMCEPACGPSTPCNE 169
KCA GS P+ P + +P P+TP ++
Sbjct: 411 KCAGGSSTPSKPSPVHKPTPVPTTPVHK 438
>At4g32100.1 68417.m04567 hypothetical protein
Length = 123
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 248 VKKGRCPEYPRGPWICTHMCTGDSDCPRTLKCCQNRCGALTCQKPDAEIDEVSTSP 415
+K GR E R PW DS +L Q++ G + KP+ E+ +++SP
Sbjct: 9 IKLGRKEETGRRPWY-----GDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSP 59
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,880,114
Number of Sequences: 28952
Number of extensions: 278208
Number of successful extensions: 747
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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