Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A24
(485 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16SP7 Cluster: Succinate dehydrogenase, putative; n=2;... 94 2e-18
UniRef50_Q9VCI5 Cluster: Putative succinate dehydrogenase [ubiqu... 89 7e-17
UniRef50_UPI0000D567F7 Cluster: PREDICTED: similar to CG10219-PA... 86 5e-16
UniRef50_Q4PM44 Cluster: Possible succinate-ubiquinone reductase... 81 2e-14
UniRef50_UPI00015B5CA3 Cluster: PREDICTED: similar to GA10165-PA... 74 2e-12
UniRef50_UPI00005172F6 Cluster: PREDICTED: similar to CG10219-PA... 67 2e-10
UniRef50_Q17IC3 Cluster: Succinate dehydrogenase, putative; n=1;... 62 9e-09
UniRef50_Q8WSR2 Cluster: Cytochrome b small subunit of succinate... 51 1e-05
UniRef50_Q5DG18 Cluster: SJCHGC06566 protein; n=1; Schistosoma j... 51 2e-05
UniRef50_Q6WLC4 Cluster: Succinate dehydrogenase cytochrome B sm... 47 2e-04
UniRef50_UPI0000587EB0 Cluster: PREDICTED: similar to succinate ... 46 3e-04
UniRef50_O14521 Cluster: Succinate dehydrogenase [ubiquinone] cy... 46 3e-04
UniRef50_P92507 Cluster: Succinate dehydrogenase [ubiquinone] cy... 46 3e-04
UniRef50_Q6DGM2 Cluster: Zgc:92857; n=2; Danio rerio|Rep: Zgc:92... 46 6e-04
UniRef50_O62215 Cluster: Putative succinate dehydrogenase [ubiqu... 41 0.013
UniRef50_Q4P7R8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.017
UniRef50_Q5KMR1 Cluster: Mitochondrial inner membrane protein, p... 38 0.091
UniRef50_A6QY87 Cluster: Succinate dehydrogenase membrane anchor... 37 0.28
UniRef50_Q9P7X0 Cluster: Succinate dehydrogenase [ubiquinone] cy... 36 0.37
UniRef50_Q0JB06 Cluster: Os04g0564400 protein; n=1; Oryza sativa... 35 1.1
UniRef50_Q9ZXA5 Cluster: Gp43; n=2; PhiC31-like viruses|Rep: Gp4... 33 3.4
UniRef50_A3LXI3 Cluster: Succinate dehydrogenase membrane anchor... 32 6.0
UniRef50_A2QB53 Cluster: Catalytic activity: succinate + accepto... 32 6.0
UniRef50_Q8MPD8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
>UniRef50_Q16SP7 Cluster: Succinate dehydrogenase, putative; n=2;
Aedes aegypti|Rep: Succinate dehydrogenase, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 177
Score = 93.9 bits (223), Expect = 2e-18
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
L+A+ I H +WGLEAI DYVR +FG +PKIA GL+ +VS ATL GLFY I +DIG+
Sbjct: 104 LMAVSIVMHQYWGLEAIVTDYVRPILFGAAVPKIAHGLLLVVSAATLGGLFYFIHNDIGI 163
Query: 181 ANTVRQFWAIR 213
ANT+R+ W+ +
Sbjct: 164 ANTIRKIWSTK 174
>UniRef50_Q9VCI5 Cluster: Putative succinate dehydrogenase
[ubiquinone] cytochrome b small subunit, mitochondrial
precursor; n=4; Diptera|Rep: Putative succinate
dehydrogenase [ubiquinone] cytochrome b small subunit,
mitochondrial precursor - Drosophila melanogaster (Fruit
fly)
Length = 182
Score = 88.6 bits (210), Expect = 7e-17
Identities = 38/78 (48%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
L+AI + H+ WG+EA+ VDY+R S+ G V+PK+A + ++S+ATL GLFY I +D+GL
Sbjct: 105 LMAISVVIHTHWGVEAMVVDYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGL 164
Query: 181 ANTVRQFWAIR-SDNQKS 231
AN +++FWAI+ D +K+
Sbjct: 165 ANGIKRFWAIKGKDAEKA 182
>UniRef50_UPI0000D567F7 Cluster: PREDICTED: similar to CG10219-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG10219-PA - Tribolium castaneum
Length = 170
Score = 85.8 bits (203), Expect = 5e-16
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
L+A+ H WGLEA+ VDY R + G ++PK+A+GL+YL+S TL GL Y +DIG+
Sbjct: 99 LLAVASVIHFHWGLEAVVVDYARPIVVGNILPKLALGLLYLISATTLGGLIYFNINDIGI 158
Query: 181 ANTVRQFWAIR 213
T+R+FWAI+
Sbjct: 159 GKTIRKFWAIK 169
>UniRef50_Q4PM44 Cluster: Possible succinate-ubiquinone reductase
cytochrome b small subunit; n=1; Ixodes scapularis|Rep:
Possible succinate-ubiquinone reductase cytochrome b
small subunit - Ixodes scapularis (Black-legged tick)
(Deer tick)
Length = 164
Score = 80.6 bits (190), Expect = 2e-14
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
L+AI +T H WG+E I VDYVR S+FG +IPK+A+G VY +SI+ L GL Y D+G+
Sbjct: 95 LLAISVTMHLHWGVETIVVDYVRPSIFGAMIPKVAVGAVYALSISALVGLLYFNFTDVGI 154
Query: 181 ANTVRQFWAI 210
V+ W++
Sbjct: 155 VKAVQLVWSL 164
>UniRef50_UPI00015B5CA3 Cluster: PREDICTED: similar to GA10165-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA10165-PA - Nasonia vitripennis
Length = 191
Score = 73.7 bits (173), Expect = 2e-12
Identities = 31/73 (42%), Positives = 47/73 (64%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
L+A+L H WGLEAI +DY R + GP++PK+ +YLVS TLAGL ++ + G+
Sbjct: 118 LLAVLSVIHVHWGLEAIILDYARPIVVGPIVPKVCFVALYLVSALTLAGLLVLVYNGPGI 177
Query: 181 ANTVRQFWAIRSD 219
+ ++Q W+I D
Sbjct: 178 SKVIKQGWSIGKD 190
>UniRef50_UPI00005172F6 Cluster: PREDICTED: similar to CG10219-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG10219-PA - Apis mellifera
Length = 113
Score = 66.9 bits (156), Expect = 2e-10
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIA-IGLVYLVSIATLAGLFYIISHDIG 177
L+++LI H WGLEAI DY R + GP++PK+ + L++L +I TL GLF +I++ G
Sbjct: 30 LMSLLIVIHMHWGLEAIITDYARPRVVGPLLPKLLHLSLIFLSAI-TLCGLFLLINNGPG 88
Query: 178 LANTVRQFWAI 210
++ +++ WAI
Sbjct: 89 VSKAIKEAWAI 99
>UniRef50_Q17IC3 Cluster: Succinate dehydrogenase, putative; n=1;
Aedes aegypti|Rep: Succinate dehydrogenase, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 61.7 bits (143), Expect = 9e-09
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
++AI + H GL ++ DYVR + + K A G+ +S+ATL GL Y+ DIG+
Sbjct: 78 IIAICVVGHQQTGLSSVVTDYVRKDLLRGMATKAAHGVTAGLSVATLVGLLYLTFADIGI 137
Query: 181 ANTVRQFWAIR 213
TVR+ WA++
Sbjct: 138 TETVRRIWAVQ 148
>UniRef50_Q8WSR2 Cluster: Cytochrome b small subunit of
succinate-ubiquinone reductase; n=1; Ascaris suum|Rep:
Cytochrome b small subunit of succinate-ubiquinone
reductase - Ascaris suum (Pig roundworm) (Ascaris
lumbricoides)
Length = 141
Score = 51.2 bits (117), Expect = 1e-05
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
++ + I H WG+ + DY R + G + ++A VY++++ LA L + + D+GL
Sbjct: 72 VLTVAIVLHVHWGIAGVVSDYARPFVIGDTLARVARASVYIITVILLASLLHFNNSDVGL 131
Query: 181 ANTVRQFWAI 210
W++
Sbjct: 132 TKAFEMVWSL 141
>UniRef50_Q5DG18 Cluster: SJCHGC06566 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06566 protein - Schistosoma
japonicum (Blood fluke)
Length = 179
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
+V ++ HS+WG + + DY +GP + I L ++S AGL Y +D+G
Sbjct: 110 IVVTAVSMHSYWGFDGVIKDYAFERRYGPALMPILRTLWKIMSGCGFAGLLYFNFNDVGF 169
Query: 181 ANTVRQFWAI 210
V++ WA+
Sbjct: 170 ITAVKKLWAL 179
>UniRef50_Q6WLC4 Cluster: Succinate dehydrogenase cytochrome B small
subunit; n=1; Branchiostoma belcheri tsingtauense|Rep:
Succinate dehydrogenase cytochrome B small subunit -
Branchiostoma belcheri tsingtauense
Length = 154
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A + H WG E I DY+ GP++P+++ +Y S+ AGL Y +D+G+
Sbjct: 89 LAAAVVLHGHWGFEQILTDYIH----GPLLPRLSKLALYGGSVLAFAGLCYFNYNDVGIT 144
Query: 184 NTVRQFW 204
+ W
Sbjct: 145 KAISMIW 151
>UniRef50_UPI0000587EB0 Cluster: PREDICTED: similar to succinate
dehydrogenase cytochrome B small subunit precursor; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
succinate dehydrogenase cytochrome B small subunit
precursor - Strongylocentrotus purpuratus
Length = 148
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A + H WG+E + +DYV G + K+A ++ +S + AGL Y +D+GL
Sbjct: 84 LAASLVLHGHWGMEQVFLDYVH----GETMSKVANASLFAISALSFAGLCYFNYNDVGLT 139
Query: 184 NTVRQFWA 207
V W+
Sbjct: 140 KAVMMLWS 147
>UniRef50_O14521 Cluster: Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial precursor;
n=39; Eumetazoa|Rep: Succinate dehydrogenase
[ubiquinone] cytochrome b small subunit, mitochondrial
precursor - Homo sapiens (Human)
Length = 159
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>UniRef50_P92507 Cluster: Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial precursor;
n=1; Ascaris suum|Rep: Succinate dehydrogenase
[ubiquinone] cytochrome b small subunit, mitochondrial
precursor - Ascaris suum (Pig roundworm) (Ascaris
lumbricoides)
Length = 156
Score = 46.4 bits (105), Expect = 3e-04
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A+ +T H WG+ + DY R + G + Y+ + LAGL Y HD+GL
Sbjct: 88 LALALTLHVHWGVWGVVNDYGRPFVLGDTLAAAVRVGAYIFTACLLAGLLYFNEHDVGLT 147
Query: 184 NTVRQFWAI 210
W +
Sbjct: 148 RAFEMVWEL 156
>UniRef50_Q6DGM2 Cluster: Zgc:92857; n=2; Danio rerio|Rep: Zgc:92857
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 154
Score = 45.6 bits (103), Expect = 6e-04
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WG+ + DYV G V K+A ++L+S AT GL Y +D+GL
Sbjct: 90 IAAALTMHGHWGIGQVLTDYVH----GEVKIKLAKVGIFLLSTATFFGLCYFNYNDVGLC 145
Query: 184 NTVRQFW 204
V W
Sbjct: 146 KAVVMLW 152
>UniRef50_O62215 Cluster: Putative succinate dehydrogenase
[ubiquinone] cytochrome b small subunit, mitochondrial
precursor; n=2; Caenorhabditis|Rep: Putative succinate
dehydrogenase [ubiquinone] cytochrome b small subunit,
mitochondrial precursor - Caenorhabditis elegans
Length = 145
Score = 41.1 bits (92), Expect = 0.013
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
++ + +T H WG+ + DY R + G K A VYL++ L L + ++D+G+
Sbjct: 76 VLTVALTLHIHWGIHGVVYDYARPYVIGEAAAKAAHVGVYLITGLLLGALLHFNTNDVGI 135
>UniRef50_Q4P7R8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 172
Score = 40.7 bits (91), Expect = 0.017
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A+ + HS G + I DY+ F P+ +A + ++ATL GL+ ++D+GL
Sbjct: 105 LALSLVVHSHIGFDCIFADYLHKRKF-PIAGPLATWSLRAATLATLYGLYEFNTNDVGLT 163
Query: 184 NTVRQFW 204
+ + W
Sbjct: 164 ELIAKVW 170
>UniRef50_Q5KMR1 Cluster: Mitochondrial inner membrane protein,
putative; n=1; Filobasidiella neoformans|Rep:
Mitochondrial inner membrane protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 181
Score = 38.3 bits (85), Expect = 0.091
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
++AI + H+ G +A VDYV F PV+ I ++ + ++ G++ ++DIGL
Sbjct: 113 ILAISLIVHTHIGFDACVVDYVHPRKF-PVLGPITKWILRAATGLSVWGVYEFNTNDIGL 171
Query: 181 ANTVRQFW 204
V++ W
Sbjct: 172 TELVKRAW 179
>UniRef50_A6QY87 Cluster: Succinate dehydrogenase membrane anchor
subunit; n=3; Pezizomycotina|Rep: Succinate
dehydrogenase membrane anchor subunit - Ajellomyces
capsulatus NAm1
Length = 203
Score = 36.7 bits (81), Expect = 0.28
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 25 HSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLANTVRQFW 204
HS G +A +DY+ A P K L+ ++++ T GL+ ++DIG+ +++ W
Sbjct: 143 HSHIGFQACIIDYIPAWRM-PKARKAFDWLLRIMTLVTAVGLYEFETNDIGMTEAIKRIW 201
>UniRef50_Q9P7X0 Cluster: Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial precursor;
n=1; Schizosaccharomyces pombe|Rep: Succinate
dehydrogenase [ubiquinone] cytochrome b small subunit,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 186
Score = 36.3 bits (80), Expect = 0.37
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
L LIT H+ G E+ +DY A F + P + ++ ++ TL G++ ++DIGL
Sbjct: 119 LACTLIT-HAHLGFESCVIDYFPARRFKKLSP-LMHWILRGCTVLTLIGVYEFNTNDIGL 176
Query: 181 ANTVRQFW 204
+++ W
Sbjct: 177 TEGIKKLW 184
>UniRef50_Q0JB06 Cluster: Os04g0564400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os04g0564400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 173
Score = 34.7 bits (76), Expect = 1.1
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 123 RIHSNPRRSVLH---H*PRHRSCEHRPTVLGDPLRQPE 227
R+ +NPR VL H PRHRS H P VL P+ P+
Sbjct: 71 RLSANPRVGVLTARPHSPRHRSSSHCPVVLAAPVLLPQ 108
>UniRef50_Q9ZXA5 Cluster: Gp43; n=2; PhiC31-like viruses|Rep: Gp43 -
Bacteriophage phi-C31
Length = 729
Score = 33.1 bits (72), Expect = 3.4
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -3
Query: 249 DGYTNL*LLVVGADRPELSDGVRKTDVVANDVKQTG--EGCYGYEIN*AYRNFGYDGTEH 76
DG T + LL G L G R D+VA+ +K+ G G E+N AY++ G +G E
Sbjct: 196 DGKTAMGLLSQG-----LQGGARDADLVADSLKEFGLIVRAGGDEVNAAYKSMGLNGAEM 250
Query: 75 TR 70
T+
Sbjct: 251 TK 252
>UniRef50_A3LXI3 Cluster: Succinate dehydrogenase membrane anchor
subunit; n=6; Saccharomycetales|Rep: Succinate
dehydrogenase membrane anchor subunit - Pichia stipitis
(Yeast)
Length = 162
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 13 LITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLANTV 192
L+ H + G ++ +DY+ ++GP+ L + +A GL+ I S + G+A +
Sbjct: 98 LLLYHCYAGFQSCIIDYIPRRVYGPLHNYAMYLLTFGTGVAGY-GLYQIESKEDGVAGII 156
Query: 193 RQFW 204
+ W
Sbjct: 157 SKVW 160
>UniRef50_A2QB53 Cluster: Catalytic activity: succinate + acceptor =
fumarate + reduced acceptor precursor; n=5;
Trichocomaceae|Rep: Catalytic activity: succinate +
acceptor = fumarate + reduced acceptor precursor -
Aspergillus niger
Length = 220
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +1
Query: 1 LVAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGL 180
++ I HS G A DY P I L+ +++T GL+ ++D+G+
Sbjct: 152 VICSAIVVHSHIGFHASITDYFPTRRV-PKTHTFMIWLLRAFTLSTAVGLYEFETNDVGV 210
Query: 181 ANTVRQFW 204
+R+ W
Sbjct: 211 TEALRRVW 218
>UniRef50_Q8MPD8 Cluster: Putative uncharacterized protein; n=1;
Taenia solium|Rep: Putative uncharacterized protein -
Taenia solium (Pork tapeworm)
Length = 194
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 161 LATTSVLRTPSDSSGRSAPTTRSHKFV*PSNDCSLVHTFFFC 286
+A L +P +SGR AP++R + V PS+DC L + FC
Sbjct: 92 MADARPLESPF-TSGRKAPSSRPIRKVAPSDDCCLFTSVNFC 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,041,868
Number of Sequences: 1657284
Number of extensions: 9087444
Number of successful extensions: 21464
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21448
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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