Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A24
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   9.7  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 137 PSPVCFTSLATTSVLRTPSDSSGRSAPTTRSHKFV*P 247
           P P C T+ +TTS     S +S  S+PT      V P
Sbjct: 38  PVPACTTTTSTTST----SGASAASSPTRDEMSVVVP 70


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 137 PSPVCFTSLATTSVLRTPSDSSGRSAPTTRSHKFV*P 247
           P P C T+ +TTS     S +S  S+PT      V P
Sbjct: 38  PVPACTTTTSTTST----SGASAASSPTRDEMSVVVP 70


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 307 DLLIITKTKKKSVNQTTIIRRLYEFMTSGCRSGSP 203
           D  +I       + Q  I R + + + + CR+G P
Sbjct: 707 DRRMIETATDAMIEQVAIYREVEKLLLAKCRNGEP 741


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,819
Number of Sequences: 2352
Number of extensions: 9220
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)