Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A24
(485 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein. 51 2e-06
CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein. 46 5e-05
BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase... 46 5e-05
AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of cytoch... 46 5e-05
AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subu... 46 5e-05
>AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein.
Length = 159
Score = 51.2 bits (117), Expect = 2e-06
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T HS WGL + DYV G +PK A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHSHWGLGQVVTDYVH----GDTLPKAARAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 RAVAMLWKL 159
>CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of
cytochrome b of succinate dehydrogenase protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
>AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subunit
of complex II protein.
Length = 159
Score = 46.4 bits (105), Expect = 5e-05
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 4 VAILITAHSFWGLEAIAVDYVRASMFGPVIPKIAIGLVYLVSIATLAGLFYIISHDIGLA 183
+A +T H WGL + DYV G + K A + +S T AGL Y HD+G+
Sbjct: 95 LAAALTLHGHWGLGQVVTDYVH----GDALQKAAKAGLLALSALTFAGLCYFNYHDVGIC 150
Query: 184 NTVRQFWAI 210
V W +
Sbjct: 151 KAVAMLWKL 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,806,174
Number of Sequences: 237096
Number of extensions: 1341644
Number of successful extensions: 6711
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6697
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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