Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A24
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   1.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.3  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 93  YDGTEHTRPYVIYGNRL*TPEAMRGDENRD 4
           YD T    PY +Y     +   +  +ENRD
Sbjct: 328 YDNTPRDFPYYMYSREQYSQSHLISNENRD 357


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 274  SVNQTTIIRRLYEFMTSGC 218
            S N TT++ RL+ +  +GC
Sbjct: 1509 SPNSTTLVLRLHVWPDNGC 1527


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 274  SVNQTTIIRRLYEFMTSGC 218
            S N TT++ RL+ +  +GC
Sbjct: 1505 SPNSTTLVLRLHVWPDNGC 1523


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 82  RTYSPVRNLRQSPLDPRSYA 23
           R ++P+  L  +PL PR Y+
Sbjct: 881 RPFAPLLLLHLTPLQPRFYS 900


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,035
Number of Sequences: 438
Number of extensions: 3181
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)