Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A23
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr...    31   1.4  
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.     31   1.8  
U89278-1|AAC51170.1|  433|Homo sapiens polyhomeotic 2 homolog pr...    29   4.1  
AL834429-1|CAD39090.1| 1064|Homo sapiens hypothetical protein pr...    29   5.5  
AK056421-1|BAB71179.1|  582|Homo sapiens .-).  protein.                29   5.5  
AB046802-1|BAB13408.2| 1740|Homo sapiens KIAA1582 protein protein.     29   5.5  
BC045631-1|AAH45631.1|  999|Homo sapiens TNRC6C protein protein.       29   7.2  
AK130527-1|BAC85370.1|  385|Homo sapiens protein ( Homo sapiens ...    29   7.2  
AF312918-1|AAG34121.1|  919|Homo sapiens MondoA protein.               29   7.2  
BC028614-1|AAH28614.1|  963|Homo sapiens Ras interacting protein...    28   9.5  
AY378097-1|AAR24580.1|  962|Homo sapiens Ras-interacting protein...    28   9.5  
AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.     28   9.5  

>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
           protein.
          Length = 1009

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 13  PVPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLHPAILALIGL 171
           P P  PPP     P  PG   ++ P P L   +   P    T  P ++   GL
Sbjct: 476 PPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTSSPTVVFNSGL 528


>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
          Length = 1112

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 13  PVPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLHPAILALIGL 171
           P P  PPP     P  PG   ++ P P L   +   P    T  P ++   GL
Sbjct: 579 PPPPPPPPPPPPPPPLPGPASETVPAPPLAPPLPSAPPLPGTSSPTVVFNSGL 631


>U89278-1|AAC51170.1|  433|Homo sapiens polyhomeotic 2 homolog
           protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 13  PVPSRPPPEEMVTPARP-GHLLDSFPTPSLG 102
           PVP+  P   ++TPARP G +    P P LG
Sbjct: 31  PVPASRPGRPLLTPARPCGRMRRGSPGPRLG 61


>AL834429-1|CAD39090.1| 1064|Homo sapiens hypothetical protein
           protein.
          Length = 1064

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   LSHPVPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLHPAILA---LIGLN 174
           +  P P  PPP   + P+     +DSFP+     G+      E+   P   A   L GLN
Sbjct: 586 VKQPPPPPPPPHLSLHPSAGKSAMDSFPSHPQTPGLPDLQTKEQQSSPNTFAPYPLAGLN 645

Query: 175 GDLH 186
            +++
Sbjct: 646 PNMN 649


>AK056421-1|BAB71179.1|  582|Homo sapiens .-).  protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   LSHPVPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLHPAILA---LIGLN 174
           +  P P  PPP   + P+     +DSFP+     G+      E+   P   A   L GLN
Sbjct: 65  VKQPPPPPPPPHLSLHPSAGKSAMDSFPSHPQTPGLPDLQTKEQQSSPNTFAPYPLAGLN 124

Query: 175 GDLH 186
            +++
Sbjct: 125 PNMN 128


>AB046802-1|BAB13408.2| 1740|Homo sapiens KIAA1582 protein protein.
          Length = 1740

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4    LSHPVPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLHPAILA---LIGLN 174
            +  P P  PPP   + P+     +DSFP+     G+      E+   P   A   L GLN
Sbjct: 1262 VKQPPPPPPPPHLSLHPSAGKSAMDSFPSHPQTPGLPDLQTKEQQSSPNTFAPYPLAGLN 1321

Query: 175  GDLH 186
             +++
Sbjct: 1322 PNMN 1325


>BC045631-1|AAH45631.1|  999|Homo sapiens TNRC6C protein protein.
          Length = 999

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   LSHPVPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLHPAILA---LIGLN 174
           +  P P  PPP   + P+     +DSFP+     G+      E+   P   A   L GLN
Sbjct: 482 VKQPPPPPPPPHLSLHPSACKSAMDSFPSHPQTPGLPDLQTKEQQSSPNTFAPYPLAGLN 541

Query: 175 GDLH 186
            +++
Sbjct: 542 PNMN 545


>AK130527-1|BAC85370.1|  385|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27017 fis, clone SLV05746. ).
          Length = 385

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 1   YLSHPVPSRPPPEEMVTPARPGHLLDSFPTP 93
           YL+H +P    P E + P    HLL   P P
Sbjct: 223 YLAHRLPVEQAPSEPLDPGGHLHLLQDLPAP 253


>AF312918-1|AAG34121.1|  919|Homo sapiens MondoA protein.
          Length = 919

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 19  PSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKTLH 144
           PS PP     TPAR  H   + P P  G G  + P  ++ +H
Sbjct: 38  PSPPPASGAATPAR-AHASAAPPPPRAGPGREEPPRRQQIIH 78


>BC028614-1|AAH28614.1|  963|Homo sapiens Ras interacting protein 1
           protein.
          Length = 963

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 110 IPKPREGVGKLSKRWPGLAGVTISS 36
           I  PR+ + KL +RWP  A V  SS
Sbjct: 25  INSPRKQLAKLGRRWPSAASVKSSS 49


>AY378097-1|AAR24580.1|  962|Homo sapiens Ras-interacting protein
           protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 110 IPKPREGVGKLSKRWPGLAGVTISS 36
           I  PR+ + KL +RWP  A V  SS
Sbjct: 25  INSPRKQLAKLGRRWPSAASVKSSS 49


>AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 16  VPSRPPPEEMVTPARPGHLLDSFPTPSLGLG 108
           +P  PPP  +  P  PG L+   P P  G G
Sbjct: 143 IPFPPPPPGLPPPPPPGMLMPPMPGPGPGPG 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,976,412
Number of Sequences: 237096
Number of extensions: 2337497
Number of successful extensions: 6655
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6613
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)