Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A23
(394 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.18
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 1.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.7
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 22 2.9
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 3.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 3.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 3.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 3.8
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 3.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 3.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 6.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 6.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 6.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 6.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 6.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 6.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 20 8.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 20 8.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 8.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 20 8.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 195 YYPCCDECY 221
YYPCCDE Y
Sbjct: 214 YYPCCDEPY 222
Score = 20.2 bits (40), Expect = 8.8
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2
Query: 104 WEYDSVQIQKKPCTQ 148
W YD +QI K Q
Sbjct: 166 WTYDGIQIDLKHINQ 180
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 1.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 195 YYPCCDECY 221
YYPCC E Y
Sbjct: 228 YYPCCTEPY 236
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Frame = +3
Query: 189 LAYYPCC--DECYVLPHPLQC 245
+ YYPCC C+ + P C
Sbjct: 483 IGYYPCCWWKICWTITTPAIC 503
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Frame = +3
Query: 189 LAYYPCC--DECYVLPHPLQC 245
+ YYPCC C+ + P C
Sbjct: 536 IGYYPCCWWKICWTITTPAIC 556
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 21.8 bits (44), Expect = 2.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 247 RPCSPVPHT*NLGFPVLIPKDRLGYCDPGPNTGS 348
RPC+ V +IP++ G+ D GP T S
Sbjct: 116 RPCTSVEEY------AIIPQEIAGFADEGPFTTS 143
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 3.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 172 LGLLGQEWLGARFFLNLDTVVFPNQGKGWESCLRD 68
L LL ++ LG + N+ V P+ + W + LRD
Sbjct: 380 LDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRD 414
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 3.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 195 YYPCCDECYV 224
+Y CCDE Y+
Sbjct: 223 FYTCCDEPYL 232
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 3.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 195 YYPCCDECYV 224
+Y CCDE Y+
Sbjct: 223 FYTCCDEPYL 232
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 195 YYPCCDECYV 224
+Y CCDE Y+
Sbjct: 219 FYTCCDEPYL 228
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 3.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 172 LGLLGQEWLGARFFLNLDTVVFPNQGKGWESCLRD 68
L LL ++ LG + N+ V P+ + W + LRD
Sbjct: 380 LDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRD 414
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 3.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 172 LGLLGQEWLGARFFLNLDTVVFPNQGKGWESCLRD 68
L LL ++ LG + N+ V P+ + W + LRD
Sbjct: 6 LDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRD 40
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 77 TAFPPLPLVWEYDSVQIQ 130
T PP PLVW + ++
Sbjct: 335 TGTPPPPLVWRRNGADLE 352
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 6.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 84 SHPFPWFGNTTVSRFRKNLAP 146
S PFP F RFR +L P
Sbjct: 150 STPFPRFIPPNAYRFRPSLNP 170
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 6.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 84 SHPFPWFGNTTVSRFRKNLAP 146
S PFP F RFR +L P
Sbjct: 150 STPFPRFIPPNAYRFRPSLNP 170
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 6.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 84 SHPFPWFGNTTVSRFRKNLAP 146
S PFP F RFR +L P
Sbjct: 150 STPFPRFIPPNAYRFRPSLNP 170
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 6.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 84 SHPFPWFGNTTVSRFRKNLAP 146
S PFP F + RFR L P
Sbjct: 155 STPFPRFISPNAYRFRPPLNP 175
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 195 YYPCCDECYV 224
YY CC E Y+
Sbjct: 210 YYNCCPEPYI 219
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 6.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 84 SHPFPWFGNTTVSRFRKNLAP 146
S PFP F RFR +L P
Sbjct: 383 STPFPRFIPPNAYRFRPSLNP 403
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 101 VWEYDSVQIQK 133
+W+YDS I K
Sbjct: 318 IWDYDSTYIPK 328
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 192 AYYPCCDECY 221
A+Y CC+E Y
Sbjct: 214 AFYICCEEPY 223
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 8.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 90 PFPWFGNTTVSRFRKNLAP 146
PFP F V RFR L P
Sbjct: 375 PFPRFIPPNVYRFRPPLNP 393
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 20.2 bits (40), Expect = 8.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 229 LTPYNVRPCSPVP 267
LTP + P SPVP
Sbjct: 435 LTPPSSNPVSPVP 447
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,743
Number of Sequences: 438
Number of extensions: 3807
Number of successful extensions: 23
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9638226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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