Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A22
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       27   0.073
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.22 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   4.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.4  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 0.073
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
           N   C+PN C NNG C + + +    C
Sbjct: 106 NTDDCSPNPCRNNGSCVDRIADFECNC 132



 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 333 QNCFTCAPNLCLNNGVCQEALTEHGYVC 416
           +N   C  N C N G C + +     +C
Sbjct: 67  ENINDCKVNPCENGGTCVDKINAFQCIC 94


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +3

Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
           N   C PN C N G C + +      C
Sbjct: 222 NVDDCKPNPCQNGGTCHDLVNSFSCSC 248



 Score = 24.6 bits (51), Expect = 0.39
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 342 FTCAPNLCLNNGVCQEALTEHGYVC 416
           + C  N C N GVC+ +    GY+C
Sbjct: 378 YDCDSNPCQNGGVCRIS-DGGGYIC 401



 Score = 23.8 bits (49), Expect = 0.68
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
           N   C P  C NNG C + +   G+ C
Sbjct: 260 NVDDCRPGACHNNGTCLDKV--GGFEC 284



 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +3

Query: 327 NVQNCFT-CAPNLCLNNGVCQEALTEHGYVC 416
           N QN    C  + CLN   CQ+  T +   C
Sbjct: 57  NCQNRINLCDSSPCLNGATCQDHTTHYTCHC 87



 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
           CA + C N GVC      H   C
Sbjct: 342 CATSPCQNGGVCTTIHAGHKCTC 364



 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
           C    C+N G C + +  + Y+C
Sbjct: 27  CTETSCMNGGTCIDGI--NSYIC 47


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 252 FVGCISMLILGNE 290
           FVGC+  L+L  E
Sbjct: 95  FVGCVESLLLSEE 107


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 5   ILTRNWRWYC 34
           +LT   RWYC
Sbjct: 286 VLTYEMRWYC 295


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 67  LSCKGRSPLTLTIPAP 20
           L  +G SPL L +P P
Sbjct: 188 LPTQGASPLPLLVPIP 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,537
Number of Sequences: 336
Number of extensions: 1928
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)