Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A22
(416 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 66 8e-12
SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 64 6e-11
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 54 5e-08
SB_55345| Best HMM Match : Laminin_G_2 (HMM E-Value=2e-31) 54 6e-08
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 50 1e-06
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 45 2e-05
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 41 4e-04
SB_7492| Best HMM Match : Laminin_G_2 (HMM E-Value=0.0025) 40 0.001
SB_13148| Best HMM Match : Laminin_G_2 (HMM E-Value=6.4e-27) 39 0.002
SB_47423| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_11569| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.010
SB_39328| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 35 0.023
SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.023
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 34 0.041
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.072
SB_30923| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.095
SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39) 33 0.12
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 33 0.12
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 32 0.17
SB_41795| Best HMM Match : EGF (HMM E-Value=8.7e-11) 32 0.22
SB_38062| Best HMM Match : EGF (HMM E-Value=1.8e-07) 32 0.22
SB_786| Best HMM Match : EGF (HMM E-Value=0) 32 0.22
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.22
SB_50262| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.29
SB_33543| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.29
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.38
SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.38
SB_40275| Best HMM Match : Cadherin (HMM E-Value=0) 31 0.50
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 30 0.67
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.67
SB_4760| Best HMM Match : EGF (HMM E-Value=8.29989e-42) 30 0.88
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 1.2
SB_7108| Best HMM Match : Pili_assembly_C (HMM E-Value=0.83) 29 1.2
SB_47131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 29 1.5
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 29 1.5
SB_58558| Best HMM Match : EGF (HMM E-Value=0) 29 2.0
SB_19005| Best HMM Match : EGF (HMM E-Value=1.4e-20) 29 2.0
SB_13146| Best HMM Match : Laminin_G_2 (HMM E-Value=1.5e-25) 29 2.0
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 2.7
SB_32721| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 28 3.6
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 28 3.6
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 27 4.7
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_5870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_57231| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 27 4.7
SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13) 27 4.7
SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34) 27 4.7
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 27 6.2
SB_1891| Best HMM Match : EGF (HMM E-Value=6.5e-15) 27 6.2
SB_47369| Best HMM Match : EGF (HMM E-Value=0.49) 27 8.2
SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06) 27 8.2
SB_40116| Best HMM Match : EGF (HMM E-Value=0) 27 8.2
SB_13309| Best HMM Match : EGF (HMM E-Value=0) 27 8.2
SB_54457| Best HMM Match : EGF (HMM E-Value=4.6e-31) 27 8.2
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 27 8.2
SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 66.5 bits (155), Expect = 8e-12
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Frame = +3
Query: 3 QFLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL- 179
++ TG G++KV D L LN+ I+I+R G R+ + V+ P WT L+L
Sbjct: 2084 EYRYNTGQGVIKVASDTALPLNKPIAIQIARDGLRVVLTVNGKRFTTIREPGSWTGLDLL 2143
Query: 180 NQPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEK---ENVQNCFTC 350
+ PLY+G L + ++ FVGCI + + + + A + ++ V+ C C
Sbjct: 2144 DSPLYLGVSQSEANLQTRVGVSTSFVGCIRDFRVEDPDLRLRAASFDQLTVNQVRRC-GC 2202
Query: 351 APNLCLNNGVCQEALTEHGYVC 416
C N GVC + + ++ C
Sbjct: 2203 RDGGCANGGVCTKRIKDYRCEC 2224
Score = 35.9 bits (79), Expect = 0.013
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 21 GAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIG 200
G G + ++ + L +W+T+R R+G R V N SP + L ++ P+++G
Sbjct: 1955 GNGPLLLESLNSINLRQWNTLRAMRSG-RYGRLVLNGVEVSGSSPPSLSKLNVDLPMFLG 2013
Query: 201 GVPDFD 218
GVP FD
Sbjct: 2014 GVP-FD 2018
>SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 645
Score = 63.7 bits (148), Expect = 6e-11
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Frame = +3
Query: 3 QFLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELN 182
+F + G G ++ + + + +WHT+ R ++ +D+ +++P L L
Sbjct: 312 EFRYDLGYGRAVIRSKKNITVGQWHTVVAERYRRDGSLILDSEPAVKSQAPCCSVGLNLA 371
Query: 183 QPLYIGGVPDFDQLPIDLAGAS-GFVGCISMLILGNEEKNIMALALEKENVQNC----FT 347
PLY+GGV +F+ + D G + GF GCIS + + + +++ ++ ++ C
Sbjct: 372 LPLYVGGVLNFETIDTDKVGVNRGFKGCISDVAVDDNPIDLINSYVKHRGIEQCTECLLP 431
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C C+NNG C + GY+C
Sbjct: 432 CQIEPCVNNGTCIPR-GQTGYMC 453
Score = 56.4 bits (130), Expect = 9e-09
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 3 QFLLETG-AGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL 179
+F + G AG ++ + L L +W+T+ ++R S T+ VD+ S + T L L
Sbjct: 97 EFRFDLGSAGPAIIRSHQQLTLYQWYTVVLTRQESEGTLQVDSQPVRRGSSKGKSTGLNL 156
Query: 180 NQPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNCFTCAPN 359
NQ +++GGV ++ ++ GF+GCIS + + N E V C+P
Sbjct: 157 NQNMFLGGVANYSKIDRFSGFNRGFIGCISYIKVDNNTIRPGYKGRTCEGVGE--RCSPG 214
Query: 360 LCLNNGVC 383
+C N G C
Sbjct: 215 VC-NKGRC 221
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/109 (26%), Positives = 50/109 (45%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLY 194
E GAG ++ R + +WH +++ R + +D+ S + L P++
Sbjct: 532 ELGAGPAVLRSRRRVDDGQWHFVKVFRRSQDGALQIDDDEIVNGTSKNGARSLNTPGPIF 591
Query: 195 IGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
IGG D + L AS F GC+S + L N + ++ A++ NV C
Sbjct: 592 IGGGDDVETLTYGKYAAS-FRGCVSGIYLQNRKLRVLEDAVQGYNVMQC 639
>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 897
Score = 54.0 bits (124), Expect = 5e-08
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Frame = +3
Query: 3 QFLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAES-PDQWTVLEL 179
+F GA I +V+ + + LN+WH + + R + VDN G + +S ++++L
Sbjct: 375 EFRFSCGADIAQVRSRQNITLNQWHNVVVFRDKRDAHLMVDN-GDLVTQSLKGTQSMMDL 433
Query: 180 NQPLYIGGVPDFDQLPID-LAGASGFVGCISMLILGNEEKNI-MAL--ALEKENVQNCFT 347
L++GGVP ++ D + SGF GC+ ++ ++ AL ++ V+ C
Sbjct: 434 KTRLFLGGVPRMRRVTSDAVPYHSGFTGCVKSFVVDGRMLDLSQALGDVVKSRQVEECGE 493
Query: 348 CAPNLCLNNGVCQEALT 398
C +N C A++
Sbjct: 494 SRDCECHHNAPCHYAVS 510
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVPDFDQLPIDLAGASG 251
WH+++ R + VD+ S Q+ L + L+IGG P +D SG
Sbjct: 811 WHSVKFVRKSLAAYLKVDDEIKAGIASDSQYRQLN-SDVLFIGGAPT-----VDRRFMSG 864
Query: 252 FVGCISMLILGNEEKNIMALALEKENVQNC 341
VGC+ LI+G+ ++ + +NV+ C
Sbjct: 865 LVGCLKDLIVGDVPVDLASEVTSGQNVRPC 894
>SB_55345| Best HMM Match : Laminin_G_2 (HMM E-Value=2e-31)
Length = 189
Score = 53.6 bits (123), Expect = 6e-08
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +3
Query: 3 QFLLETG-AGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL 179
+F + G AG ++ + L L +W+T+ ++R S T+ VD+ S + T L L
Sbjct: 88 EFRFDLGSAGPAIIRSHQQLTLYQWYTVVLTRQESEGTLQVDSQPVRRGSSKGKSTGLNL 147
Query: 180 NQPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGN 287
NQ +++GGV ++ ++ GF+GCIS + + N
Sbjct: 148 NQNMFLGGVANYSKIDRFSGFNRGFIGCISYIKVDN 183
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 49.6 bits (113), Expect = 1e-06
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Frame = +3
Query: 3 QFLLE--TGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLE 176
Q LL+ G+G+ +++ + +WHT+ R+G + DN S L+
Sbjct: 837 QILLQYNLGSGLARIRSCSLNKTQDWHTVTAGRSGPEGYVYADNCEKVRGSSEGNLQGLD 896
Query: 177 LNQPLYIGGVPDFDQLPIDLAGASGFVGCI-SMLI-LGNEE--KNIMALALE-------- 320
L PL+IGGV D +LP + SGF G + M I N+E +N+ L +
Sbjct: 897 LYAPLFIGGVHDLSELPTYVDFKSGFRGNLYGMAIRFSNQEYWRNLSLLQTQGVSERVEA 956
Query: 321 -----KENVQNCFTCAPNLCLNNGVC-QEALTEHGYVC 416
E+ C + P CLN G C + A T YVC
Sbjct: 957 GSNIGNESYNECISQTPP-CLNGGNCTRHAAT---YVC 990
Score = 47.6 bits (108), Expect = 4e-06
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLY 194
+ G+GI + +P+ +N T+ ++RT + ++ ++N P SP L++ LY
Sbjct: 1113 DLGSGIGFGQTTQPVTINTEVTVILNRTRNSGSLQLNNDPPVAFTSPGNAVALDVTSNLY 1172
Query: 195 IGGVPDFDQL----PIDLAGASGFVGCISMLILGNEEKNIMAL-ALEKENVQNCFT 347
+GG P + D+ + GCIS + N+ + + A+ N+ NC T
Sbjct: 1173 LGGAPQLSSVNPRAVEDVISLRDYTGCISEAKVNNQALVLTEVGAVSGRNIDNCAT 1228
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N CA CLN G+C + + + +C
Sbjct: 210 NIDDCASRPCLNGGLCVDGVNSYSCLC 236
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 39 VKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQ-PLYIGGVPDF 215
+K DR + +WH + + R + + VD S E +T LELNQ PL +GG+ DF
Sbjct: 3890 IKSDRAVTDGKWHHVTVIRDKKKGELLVDGSNKKTGEVDGGFTQLELNQSPLLVGGIKDF 3949
Query: 216 D 218
D
Sbjct: 3950 D 3950
>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 3e-04
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQL--NEW---HTIRISRTGSRLTMDVDNSGPFIAESPDQWTV 170
F +TGAG+V+V+ + W H +RI++ G L D + A D +
Sbjct: 1336 FKYDTGAGLVRVESNFNYYSAGGVWYKVHLLRINQFGVILVPDTKDYKN--ARQGDSREL 1393
Query: 171 LELNQPLYIGGVPDFDQLPIDLAGASGFVGCI-SMLILGNEEKNIMALALEKE 326
L +N P+Y+GGVP + +G F+GC+ +M I + E + E++
Sbjct: 1394 LTINTPIYMGGVPPGVNTSMLESGGVSFIGCMKTMSIQSSNETETLNPRTERD 1446
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 66 NEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVPD 212
N++H IR+ R +T+ VD P PD + L YIGGVPD
Sbjct: 1556 NQFHEIRLQRAERNITLSVDKHSPLTYALPDLFL---LTGKFYIGGVPD 1601
Score = 30.3 bits (65), Expect = 0.67
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVL----ELNQPLYIGGVPDFDQLPIDLA 239
+HT+ I+ T + L +D+D G + S D TV LN LY+GGV LP+ +
Sbjct: 1184 YHTVVITFTAAGLRLDLDE-GRW-TRSVDLSTVAAGPARLNGTLYVGGVRPGAVLPLQVP 1241
Query: 240 GASGFVG 260
FVG
Sbjct: 1242 VVLPFVG 1248
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 41.1 bits (92), Expect = 4e-04
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQ 185
F +TG V N+WH ++++R S T+ VD S T + +
Sbjct: 1398 FDCQTGPAAFTVSAAVTFDDNQWHRLQLTRKDSVGTLTVDGIYTASGSSSGASTFISMGT 1457
Query: 186 PLYIGGVP-DF----DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNCFTC 350
+YIGG+P DF P G F+GCI + A+ KE V
Sbjct: 1458 GVYIGGLPTDFIITRSDPPAARVGRYPFIGCIKSVTSQGSGPWQWEQAVAKEGVDPVMNA 1517
Query: 351 AP 356
P
Sbjct: 1518 CP 1519
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 41.1 bits (92), Expect = 4e-04
Identities = 44/150 (29%), Positives = 60/150 (40%), Gaps = 22/150 (14%)
Frame = +3
Query: 33 VKVKGDRPLQLNEWHTIRISR--TGSRLTMD---VDNSGPFIAESPDQ------------ 161
+ V G L EWH I I R T R+T+D N + S D+
Sbjct: 1777 IGVTGGAMLNDGEWHMIEIHRDETTVRVTVDRCRASNISEGVTRSEDRSMCEVVGHMKKK 1836
Query: 162 -WTVLELNQPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQN 338
L LN PL +GG+ D L DL F GCI LI ++ + + + +
Sbjct: 1837 KLKFLNLNDPLQLGGIASRDLLFPDLR-FHDFNGCIRNLINEGRLYDLKSPSRQNNTREG 1895
Query: 339 CFT----CAPNLCLNNGVCQEALTEHGYVC 416
C T C PN C C +L +G+VC
Sbjct: 1896 CATMDQHCNPNSCHEQATCIGSL--NGHVC 1923
>SB_7492| Best HMM Match : Laminin_G_2 (HMM E-Value=0.0025)
Length = 87
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 6 FLLETGAGIVKVK--GDRPLQL--NEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVL 173
F +E G G +V+ ++L +WH + +++ + ++ VD + P +SP
Sbjct: 3 FRVENGNGPFEVRYTPSNSMELCDGKWHRVNLNKIRNTASIQVDGNDPVEVKSPGSLGNT 62
Query: 174 ELNQPLYIGGVP 209
L PLY+GG+P
Sbjct: 63 NLYDPLYVGGIP 74
>SB_13148| Best HMM Match : Laminin_G_2 (HMM E-Value=6.4e-27)
Length = 262
Score = 38.7 bits (86), Expect = 0.002
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +3
Query: 12 LETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPL 191
L TG G++ +G R L N+WH + ISRT + + VD G S + + L+ P
Sbjct: 149 LGTGRGLIISRGPR-LHDNKWHNVLISRTDRTIALSVD--GRLEGSSSTRGSFTRLDIPD 205
Query: 192 YIGGVPDFDQLPIDLAGASG-FVGCISMLILGNEEKNIMALA 314
+G F P ++G G F GCI L + E A A
Sbjct: 206 AVG---LFLGAPSTISGIVGNFRGCIRDLRIDGREPITNAFA 244
>SB_47423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 855
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL---NQPLYIGGVPDFDQLPIDLAG 242
WH++ I R R+T+D+D P Q++ L+ + LY G PD D L +
Sbjct: 356 WHSVTIHRKRRRVTLDLDKQKRVTVVIPGQFSFLDFKGGQEKLYFCGGPDSDTLAYSYS- 414
Query: 243 ASGFVGCISML 275
F G I L
Sbjct: 415 RKNFTGIIQQL 425
>SB_11569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 36.3 bits (80), Expect = 0.010
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 66 NEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVPDFDQLPIDLAG- 242
N+WHT++++R L + +DN + + L+L++ +++GGV LP D G
Sbjct: 16 NKWHTVKVARNQRSLLLTLDNK-ETRTNTAGSFVRLDLDKFIFVGGVD--RSLPDDYHGA 72
Query: 243 --ASGFVGCI 266
A F GC+
Sbjct: 73 RDAPNFKGCL 82
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 246 SGFVGCISMLILGNEEKNIMALALEKEN--VQNCFT---CAPNLCLNNGVCQEALTEHGY 410
+GFVGC++ + L L+ E + C C PN C N G C+E+ +
Sbjct: 247 TGFVGCMNNIKLNGALVRPRKLSKEVAGAVIGRCSITSKCFPNPCQNGGACKESWDSYTC 306
Query: 411 VC 416
C
Sbjct: 307 DC 308
>SB_39328| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1049
Score = 35.1 bits (77), Expect = 0.023
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 3 QFLLETGAGIVKVKGDRPLQ--LNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLE 176
+F + G G+VK+ + L E +RI G+ L + + T L+
Sbjct: 746 KFQFDLGPGLVKMSTELSYTGALTEMKLLRIGSFGALLVPAWKEYQNYKNYEATR-TTLD 804
Query: 177 LNQPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGN 287
L P+YIGGVP+ ++ + GF G + LG+
Sbjct: 805 LTSPIYIGGVPEHVKVHPQVTRRFGFSGYFQKVALGS 841
>SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 35.1 bits (77), Expect = 0.023
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 66 NEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGV 206
NEWH + + RTG + + +D + +P + LEL+ +YI GV
Sbjct: 120 NEWHQVELRRTGLNILLILDVTRK-SKVAPGSYNTLELDNRIYIAGV 165
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 34.3 bits (75), Expect = 0.041
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Frame = +3
Query: 12 LETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL---N 182
L+ GAG++K+ L WH I R + + +D P T +
Sbjct: 309 LDIGAGMLKLSIGEKLSDARWHRAEIKRARRNVKLTLDERLKVDGTCPPSLTAFNMQGGE 368
Query: 183 QPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEE 293
+YIGGV D + + F GCI L+ E
Sbjct: 369 GRVYIGGVSDPTRSK-NSVSRKNFEGCIRKLVFNFNE 404
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 33.5 bits (73), Expect = 0.072
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N+G C++ T G+VC
Sbjct: 233 CTPNPCKNDGTCRDISTGRGFVC 255
>SB_30923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 33.1 bits (72), Expect = 0.095
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N G C + TE G+VC
Sbjct: 75 CHPNPCKNGGTCTRSDTESGFVC 97
>SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)
Length = 201
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N GVC+E + Y C
Sbjct: 33 CDPNPCQNGGVCKETFDRNNYTC 55
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N GVC+E + Y C
Sbjct: 57 CDPNPCQNGGVCKETFDRNNYTC 79
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 333 QNCFTCAPNLCLNNGVCQEALTEHGYVC 416
+N C PN CLN G C + + +G+ C
Sbjct: 211 ENIDECDPNPCLNGGTCVDGI--NGFNC 236
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 282 GNEEKNIMALALEKENVQNC--FTCAPNLCLNNGVCQEALTEHGYVC 416
G EK L + C + C PN C N G C+++L +VC
Sbjct: 109 GRIEKKESCYCLPGYHGDGCQHYGCTPNPCQNGGTCKQSLQNGSFVC 155
>SB_41795| Best HMM Match : EGF (HMM E-Value=8.7e-11)
Length = 83
Score = 31.9 bits (69), Expect = 0.22
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C+PN C N GVC E T GY C
Sbjct: 47 CSPNPCQNGGVCTETAT--GYTC 67
>SB_38062| Best HMM Match : EGF (HMM E-Value=1.8e-07)
Length = 44
Score = 31.9 bits (69), Expect = 0.22
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN CLNNGVC+E GY C
Sbjct: 11 CHPNPCLNNGVCRE--NGGGYDC 31
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 31.9 bits (69), Expect = 0.22
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN CLN G+C +++ + GY C
Sbjct: 274 CVPNPCLNGGIC-KSVADKGYQC 295
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CAPN CLN G C T H C
Sbjct: 311 CAPNPCLNGGTCVVFYTVHLCKC 333
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 333 QNCFT-CAPNLCLNNGVC 383
+NC C+PN C NNGVC
Sbjct: 195 KNCENFCSPNPCKNNGVC 212
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N+G+C ++ G+VC
Sbjct: 102 CKPNPCANSGLCIHT-SDGGFVC 123
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 31.9 bits (69), Expect = 0.22
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 312 ALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
+L V C PN CLN G+C T+H C
Sbjct: 236 SLSATYVSTVTACQPNPCLNGGLCSRFGTQHSCQC 270
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 306 ALALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
A+ +N + C P+ C N G C E TE GY C
Sbjct: 105 AVGFRGDNCEEPSKCHPSPCRNGGECSE--TEEGYTC 139
>SB_50262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 830
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 413 HITMLSKCFLTDTIVETEIRGTSETILDIFFL 318
HI M KC LT+TIVE G T D+F +
Sbjct: 660 HIDMKCKCDLTETIVELYENGKETTHFDLFHM 691
>SB_33543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 31.5 bits (68), Expect = 0.29
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = +3
Query: 249 GFVGCISMLILGNEEKNIMALALEKENVQN------CFT---CAPNLCLNNGVC 383
GFVGC ML L + I A L K+ N C T C PN C+N G C
Sbjct: 343 GFVGC--MLNLRIDSHKITARHLSKQKYSNGIDATKCATSNRCFPNPCINRGTC 394
Score = 31.1 bits (67), Expect = 0.38
Identities = 19/86 (22%), Positives = 42/86 (48%)
Frame = +3
Query: 21 GAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIG 200
G +++ + L +WHT+ ++R G + VD+ +P + L L+ ++IG
Sbjct: 82 GVDKTEIQLGKDLFNGKWHTVSVNRNGRLTMLSVDDLST-TKITPGPYDHLNLDGLIFIG 140
Query: 201 GVPDFDQLPIDLAGASGFVGCISMLI 278
G+ + + + A + GC+S ++
Sbjct: 141 GLSVNTKNKVRIK-ALNYRGCLSDIV 165
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 31.1 bits (67), Expect = 0.38
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQP-- 188
+ G+G V + +WH I SR RL + VD+ ++ +Q +VL++
Sbjct: 1569 DLGSGPGSVINPMTVNDGDWHHITWSRQYKRLILSVDDVTMEMSTQGEQ-SVLDVADSEI 1627
Query: 189 --LYIGGVPDFDQLPIDLAGASGFVGCISML 275
++IGG P L+ + F GC+ L
Sbjct: 1628 IYVHIGGFPYLKSSATGLSTITSFQGCLKDL 1658
Score = 30.3 bits (65), Expect = 0.67
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N C + CLNNG C E + GY C
Sbjct: 855 NVVECLSDPCLNNGTCVEKIGVVGYQC 881
Score = 29.9 bits (64), Expect = 0.88
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 333 QNCFTCAPNLCLNNGVCQEALTEHGYVC 416
+N C PN CLN C + + ++ VC
Sbjct: 2241 ENINECDPNPCLNGATCLDKIADYACVC 2268
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N CA CLNNG CQ+ VC
Sbjct: 779 NIDECASQPCLNNGTCQDGRGNFSCVC 805
>SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1408
Score = 31.1 bits (67), Expect = 0.38
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N GVC+E + Y C
Sbjct: 480 CDPNPCQNGGVCKETFDRNIYTC 502
>SB_40275| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1747
Score = 30.7 bits (66), Expect = 0.50
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 3 QFLLETGAGIVKVKGDRPLQLN--EWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLE 176
+ + G V VK D+ +L+ EWHT+++ R + + +D + E TV+E
Sbjct: 1101 ELFVSLGLDPVTVKMDKGPRLDDGEWHTVQVLRNMKDIEIIIDRCSTALLEHKPDGTVVE 1160
Query: 177 LNQPLYIGG 203
+ ++ G
Sbjct: 1161 NRKSCHVYG 1169
Score = 30.7 bits (66), Expect = 0.50
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 252 FVGCIS-MLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEAL 395
F GCI+ + G ++ ++ + ++NV + C N C N G C +A+
Sbjct: 1487 FGGCIAGTSVNGANMESDPSIKVHRQNVLDGCPCLSNFCANGGTCVDAM 1535
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 30.3 bits (65), Expect = 0.67
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N CLNNG C + + +GY C
Sbjct: 588 CAKNPCLNNGACVDQV--NGYTC 608
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 30.3 bits (65), Expect = 0.67
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN CLN+GVC L H Y C
Sbjct: 297 CEPNPCLNDGVCTAFL--HDYEC 317
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN CL+ G C E E GY C
Sbjct: 695 CHPNPCLHGGTCDE--KEDGYTC 715
>SB_4760| Best HMM Match : EGF (HMM E-Value=8.29989e-42)
Length = 240
Score = 29.9 bits (64), Expect = 0.88
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C N C+N G C E L+ GY C
Sbjct: 79 CQKNPCMNGGKCVETLSGTGYEC 101
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 29.5 bits (63), Expect = 1.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N C N+G CQ+ + ++ +C
Sbjct: 379 CASNPCQNDGTCQDGIAQYTCLC 401
>SB_7108| Best HMM Match : Pili_assembly_C (HMM E-Value=0.83)
Length = 401
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LLETGAGIVKVKGDRPL-QLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQ 185
+L+TGA ++ KG+R + +N + + +T + N+ FIA +N
Sbjct: 282 ILQTGANVMSAKGNRNIAAVNASESYTTLKEAFSVTFEEINN--FIASGKLTVNDKTINL 339
Query: 186 PLYIGGVPDFDQLPIDLAGASGFVGC 263
++GG F L + L GA+ C
Sbjct: 340 EFFLGGDYKFVLLMLGLKGATANYAC 365
>SB_47131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +3
Query: 348 CAPNLCLNNGVCQE--ALTEHGYVC 416
C PN C NN CQE + +GY C
Sbjct: 64 CQPNPCRNNATCQEHTGIGCYGYYC 88
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N C NNG C++ + +GY C
Sbjct: 1596 CASNPCQNNGYCEDLI--NGYYC 1616
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 330 VQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
+Q+ C PN CL+ G C E+ VC
Sbjct: 1981 LQDWRNCEPNPCLHGGTCYPLSNEYACVC 2009
>SB_58558| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN CLN G C + + +GY C
Sbjct: 545 CQPNPCLNGGSCTDRV--NGYTC 565
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 321 KENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
K +N C PN C N G C + L + Y+C
Sbjct: 422 KNCTENINDCDPNPCGNGGTCTDQL--NAYLC 451
>SB_19005| Best HMM Match : EGF (HMM E-Value=1.4e-20)
Length = 99
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 318 EKENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
E E+ C PN CL+ G+C+E ++ + Y C
Sbjct: 54 EHEDSYRHHLCHPNPCLHGGICKE-ISGNDYEC 85
>SB_13146| Best HMM Match : Laminin_G_2 (HMM E-Value=1.5e-25)
Length = 614
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 LETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPL 191
L TG V +G R + EWH++ I+R L + VDN G ++ + +++ P
Sbjct: 501 LGTGRSKVYAEGIR-VDDGEWHSVVITREKKTLAISVDN-GRAKGQTDTRGDFNKIDLPN 558
Query: 192 YIGGVPDFDQLPIDLAG-ASGFVGCI 266
+G + +P + G F+GCI
Sbjct: 559 SVGLILG---VPSTVKGLVPNFIGCI 581
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C+ + C+N GVC + L E+ +C
Sbjct: 219 CSSSPCVNGGVCADGLGEYKCIC 241
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N C+P+ C + G CQ+ +T GY+C
Sbjct: 747 NIDDCSPSPCRHGGSCQDLVT--GYLC 771
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N C NNG C + + + VC
Sbjct: 789 CATNPCDNNGTCVDRVASYDCVC 811
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N CA + CLNN +C + + + C
Sbjct: 823 NIDDCATSPCLNNAICTDLINDFHCAC 849
>SB_32721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA + CLN+G C+E T GY C
Sbjct: 525 CASDPCLNDGTCKE--TPAGYRC 545
>SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 27.9 bits (59), Expect = 3.6
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = +3
Query: 48 DRPLQLNE-WHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVPDFDQL 224
+ PL N WH + + ++VD Q L++ L+IGG ++
Sbjct: 717 ENPLNTNRLWHKVVVWFNIKEFGLEVDGIRKIRLNPLQQSKQLDVVGNLFIGGY--MREM 774
Query: 225 PIDLAGASGFVGCISMLILGNEEKNIMALALEKENV-QNCFTCAPN 359
+GFVGCI + E N+ L+ + + V + C++ N
Sbjct: 775 ------MNGFVGCIRGFTINGEVLNLARLSKDFDYVNEGCYSACNN 814
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 195 IGGVPDFDQLPIDLAGASGFVGCISMLI 278
I G F + + +A GFVGC+S+L+
Sbjct: 152 INGKTRFGRTSLHVAAYQGFVGCVSLLL 179
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 279 LGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
+GNE + + AL + + C PN C N C E ++ C
Sbjct: 367 VGNEYRCVCALGYKGDRCDIQSKCFPNPCKNFATCTEHPNDYECTC 412
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N VC E T Y+C
Sbjct: 427 CEPNPCRNGAVCTE--TREKYIC 447
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C PN C N G+C + GY C
Sbjct: 99 CHPNPCRNGGMCTGTTSVTGYQC 121
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 242 SIWFCRMYKHADTWQRREEHHGSSSRE--RKC 331
SI F ++Y+ A TW EH +S++E +KC
Sbjct: 891 SIEFYQLYEQAATWMSDSEHFLNSTKEEAQKC 922
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C + CLNNG CQ + Y C
Sbjct: 1584 CRISPCLNNGTCQAGFGDRKYRC 1606
>SB_5870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 27.5 bits (58), Expect = 4.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 363 CLNNGVCQEALTEHGYVC 416
C+N G+C+ T GY+C
Sbjct: 108 CMNGGICEAIATCPGYIC 125
>SB_57231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 264 ISMLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNG 377
ISM +L N K + L+K CFT C N+G
Sbjct: 8 ISMSLLPNAAKKPKRMHLKKMKTTGCFTALCAACHNDG 45
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N CLN G C + + +GY C
Sbjct: 280 CASNPCLNGGTCNDLV--NGYNC 300
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N CLN G C + + +GY C
Sbjct: 1074 CASNPCLNGGTCNDLV--NGYNC 1094
>SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13)
Length = 899
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 154 GDSAINGPLLSTSIVNLEPVLLMRIVCHSLSCKGRSPLTLTIPAP 20
GD + + STS N L R++ KG SPLT+T+ AP
Sbjct: 142 GDGELLCGVRSTSECNDSEELSFRLIVRPKD-KGESPLTITLMAP 185
>SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34)
Length = 1071
Score = 27.5 bits (58), Expect = 4.7
Identities = 31/110 (28%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = +3
Query: 72 WH--TIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVPDFDQLPIDLAGA 245
WH T+++SR G L VD P Q +Y+G D
Sbjct: 293 WHNVTVQVSRRGFSLA--VDRIEPVQVSFWVQIAEFRWFTAIYLGVAWDLQP-------- 342
Query: 246 SGFVGCIS-MLILGNEEKNIMALALEKENVQNCFT---CAPNLCLNNGVC 383
GFVGC+ + I G + ++ + C C PN CLN GVC
Sbjct: 343 -GFVGCMKDVKIRGVKIRDQSVIRYRGPKFGVCPLENYCFPNPCLNGGVC 391
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 309 LALEKENVQN--CFT---CAPNLCLNNGVCQEALTEHGYVC 416
LAL +EN++ C CA N C N+G C ++ C
Sbjct: 4714 LALIEENIREKICLVVDKCATNPCKNSGTCTSVYSDFNCTC 4754
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 321 KENVQNCFT-CAPNLCLNNGVCQEALTEHGYVC 416
KE++ T C PN C N G C ++ + GY C
Sbjct: 4132 KESLLTTVTLCNPNPCQNGGSC--SIADGGYTC 4162
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 135 PFIAESPDQWTVLELNQPLYIGGVPDFDQLPI 230
PF+A +P V+ L P Y +P F+ L +
Sbjct: 284 PFLATTPSLLMVVTLTPPSYSHSIPSFNPLTL 315
>SB_1891| Best HMM Match : EGF (HMM E-Value=6.5e-15)
Length = 106
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 309 LALEKENVQN--CFT---CAPNLCLNNGVCQEALTEHGYVC 416
LAL +EN++ C CA N C N+G C ++ C
Sbjct: 16 LALIEENIREKICLVVDKCATNPCKNSGTCTSVYSDFNCTC 56
>SB_47369| Best HMM Match : EGF (HMM E-Value=0.49)
Length = 61
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = +3
Query: 345 TCAPNLCLNNGVCQ-----EALTEHGYVC 416
+C PN C N+GVC+ ++ E GY C
Sbjct: 2 SCDPNPCQNSGVCKLGETSGSIGEFGYKC 30
>SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06)
Length = 335
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 309 LALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
L L ++ V+ C N C NNG C T++G +C
Sbjct: 20 LDLREDTVRKTL-CEENGCQNNGTCFWNDTDYGCMC 54
>SB_40116| Best HMM Match : EGF (HMM E-Value=0)
Length = 340
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N CA N CLN C + + ++ VC
Sbjct: 153 NVDDCADNPCLNGATCIDGVNDYYCVC 179
>SB_13309| Best HMM Match : EGF (HMM E-Value=0)
Length = 718
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEAL-TEHGYVC 416
C+PN C N G C + L + GY C
Sbjct: 345 CSPNPCENGGKCADDLGQDSGYRC 368
>SB_54457| Best HMM Match : EGF (HMM E-Value=4.6e-31)
Length = 200
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 348 CAP-NLCLNNGVCQEALTEHGYVC 416
C P N C NNGVC+E L + C
Sbjct: 35 CHPVNPCQNNGVCKEDLDSYRCEC 58
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N CA N CLN C + + ++ VC
Sbjct: 7199 NVDDCADNPCLNGATCIDGVNDYYCVC 7225
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 336 NCFTCAPNLCLNNGVCQEALTEHGYVC 416
N CA + CLNN +C + + + C
Sbjct: 10 NIDDCATSPCLNNAICTDLINDFHCAC 36
>SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 340 QFW-TFSFSRARAMMFFSSLPSISMLIHPT 254
++W T + A AM+F S+ I +L+HPT
Sbjct: 104 RYWKTHEYYHACAMVFLFSVCHIMVLVHPT 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,809,719
Number of Sequences: 59808
Number of extensions: 246128
Number of successful extensions: 1185
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 777158991
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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