Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A22
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 55 2e-08
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 50 5e-07
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 50 5e-07
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 50 5e-07
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 50 5e-07
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 50 5e-07
U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 44 3e-05
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 44 3e-05
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 37 0.007
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 37 0.007
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 37 0.007
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 33 0.11
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 31 0.44
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 31 0.44
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 31 0.44
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 31 0.44
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 1.0
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 28 3.1
Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adap... 27 4.1
AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adap... 27 4.1
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 27 5.5
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 27 5.5
AF101319-3|AAC69355.1| 331|Caenorhabditis elegans Hypothetical ... 27 5.5
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 7.2
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 27 7.2
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 27 7.2
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 26 9.5
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 26 9.5
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 26 9.5
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 26 9.5
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 26 9.5
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 26 9.5
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 26 9.5
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 26 9.5
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 54.8 bits (126), Expect = 2e-08
Identities = 31/112 (27%), Positives = 56/112 (50%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQ 185
F E G G + + + + H++R R G M +DN S +L ++
Sbjct: 3249 FSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDG 3308
Query: 186 PLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+++GGVPD + L ++ FVGCI+ + L + ++MA A++ +NV+ C
Sbjct: 3309 NIFVGGVPDISKATGGLF-SNNFVGCIADVELNGVKLDLMATAIDGKNVKPC 3359
Score = 53.6 bits (123), Expect = 6e-08
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLE--LNQP 188
+ G G V+ P+ NEW+ I+I +++T+ +++ I + + L +N+P
Sbjct: 2607 DIGNGRQIVETTNPINPNEWNVIKIKNDKNQVTIQLNDESATIRQHTNPLPSLSTGVNRP 2666
Query: 189 LYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNCFTCAPNLCL 368
++IGG + P + A+ F G IS ++L + + V+ + NLCL
Sbjct: 2667 VFIGGRHE----PTN--EANDFRGIISQVVLSGHNVGLGDARIPSSVVKYDACASTNLCL 2720
Query: 369 NNGVCQEALTEHGYVC 416
N C+ A HG+ C
Sbjct: 2721 NGANCRNANNHHGFSC 2736
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 54.8 bits (126), Expect = 2e-08
Identities = 31/112 (27%), Positives = 56/112 (50%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQ 185
F E G G + + + + H++R R G M +DN S +L ++
Sbjct: 3249 FSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDG 3308
Query: 186 PLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+++GGVPD + L ++ FVGCI+ + L + ++MA A++ +NV+ C
Sbjct: 3309 NIFVGGVPDISKATGGLF-SNNFVGCIADVELNGVKLDLMATAIDGKNVKPC 3359
Score = 53.6 bits (123), Expect = 6e-08
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLE--LNQP 188
+ G G V+ P+ NEW+ I+I +++T+ +++ I + + L +N+P
Sbjct: 2607 DIGNGRQIVETTNPINPNEWNVIKIKNDKNQVTIQLNDESATIRQHTNPLPSLSTGVNRP 2666
Query: 189 LYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNCFTCAPNLCL 368
++IGG + P + A+ F G IS ++L + + V+ + NLCL
Sbjct: 2667 VFIGGRHE----PTN--EANDFRGIISQVVLSGHNVGLGDARIPSSVVKYDACASTNLCL 2720
Query: 369 NNGVCQEALTEHGYVC 416
N C+ A HG+ C
Sbjct: 2721 NGANCRNANNHHGFSC 2736
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 54.8 bits (126), Expect = 2e-08
Identities = 31/112 (27%), Positives = 56/112 (50%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQ 185
F E G G + + + + H++R R G M +DN S +L ++
Sbjct: 799 FSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDG 858
Query: 186 PLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+++GGVPD + L ++ FVGCI+ + L + ++MA A++ +NV+ C
Sbjct: 859 NIFVGGVPDISKATGGLF-SNNFVGCIADVELNGVKLDLMATAIDGKNVKPC 909
Score = 53.6 bits (123), Expect = 6e-08
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLE--LNQP 188
+ G G V+ P+ NEW+ I+I +++T+ +++ I + + L +N+P
Sbjct: 157 DIGNGRQIVETTNPINPNEWNVIKIKNDKNQVTIQLNDESATIRQHTNPLPSLSTGVNRP 216
Query: 189 LYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNCFTCAPNLCL 368
++IGG + P + A+ F G IS ++L + + V+ + NLCL
Sbjct: 217 VFIGGRHE----PTN--EANDFRGIISQVVLSGHNVGLGDARIPSSVVKYDACASTNLCL 270
Query: 369 NNGVCQEALTEHGYVC 416
N C+ A HG+ C
Sbjct: 271 NGANCRNANNHHGFSC 286
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 50.4 bits (115), Expect = 5e-07
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDV-DNSGPFIAESPDQWTVLELN 182
F +TG+G V +K D+ + WHTI++SR G + V DNS + ++E
Sbjct: 3371 FTYDTGSGQVIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 3430
Query: 183 QPLYIGGVP-DFDQLPIDLAGA--SGFVGCI 266
P Y+GGVP D +L S F GCI
Sbjct: 3431 PPFYVGGVPADLAGFARNLVVGVRSQFSGCI 3461
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 50.4 bits (115), Expect = 5e-07
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDV-DNSGPFIAESPDQWTVLELN 182
F +TG+G V +K D+ + WHTI++SR G + V DNS + ++E
Sbjct: 3403 FTYDTGSGQVIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 3462
Query: 183 QPLYIGGVP-DFDQLPIDLAGA--SGFVGCI 266
P Y+GGVP D +L S F GCI
Sbjct: 3463 PPFYVGGVPADLAGFARNLVVGVRSQFSGCI 3493
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 50.4 bits (115), Expect = 5e-07
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDV-DNSGPFIAESPDQWTVLELN 182
F +TG+G V +K D+ + WHTI++SR G + V DNS + ++E
Sbjct: 1217 FTYDTGSGQVIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 1276
Query: 183 QPLYIGGVP-DFDQLPIDLAGA--SGFVGCI 266
P Y+GGVP D +L S F GCI
Sbjct: 1277 PPFYVGGVPADLAGFARNLVVGVRSQFSGCI 1307
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 50.4 bits (115), Expect = 5e-07
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDV-DNSGPFIAESPDQWTVLELN 182
F +TG+G V +K D+ + WHTI++SR G + V DNS + ++E
Sbjct: 3403 FTYDTGSGQVIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 3462
Query: 183 QPLYIGGVP-DFDQLPIDLAGA--SGFVGCI 266
P Y+GGVP D +L S F GCI
Sbjct: 3463 PPFYVGGVPADLAGFARNLVVGVRSQFSGCI 3493
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 50.4 bits (115), Expect = 5e-07
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDV-DNSGPFIAESPDQWTVLELN 182
F +TG+G V +K D+ + WHTI++SR G + V DNS + ++E
Sbjct: 3403 FTYDTGSGQVIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 3462
Query: 183 QPLYIGGVP-DFDQLPIDLAGA--SGFVGCI 266
P Y+GGVP D +L S F GCI
Sbjct: 3463 PPFYVGGVPADLAGFARNLVVGVRSQFSGCI 3493
>U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical
protein T19D12.6 protein.
Length = 779
Score = 44.8 bits (101), Expect = 3e-05
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Frame = +3
Query: 21 GAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAE-SPDQWTVLELNQPLYI 197
G ++ + + L WH + + R+G + + V+ G +E + ++E ++I
Sbjct: 450 GVDATILRSENAVSLYHWHKLEVWRSGKGVLLKVNKQGWVESELHASKLEIIEETGNIFI 509
Query: 198 GGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNCF--TCA----PN 359
G + D D +P + GF GC+ + L K I+ + NV CF C+ PN
Sbjct: 510 GSLDDND-IPSVVKDIEGFAGCVKRIRLNG--KAILMQSTYATNVTECFQDPCSTFGCPN 566
Query: 360 LCLNNG---VCQ 386
CL + VCQ
Sbjct: 567 KCLAHNSMPVCQ 578
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +3
Query: 15 ETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQ---WTVLELNQ 185
+ G G ++ + EWH I + R LT + + G + + D+ + + +++
Sbjct: 172 DCGEGTIEDMYHGKFAIGEWHEINVWRKNCDLTEIIVDGGHKLVDHADEFKNYKGITMDE 231
Query: 186 PLYIGGVPDFDQLPIDLAGA-SGFVGCISMLILGNE 290
+++G P + GA GF GC+ +L++ E
Sbjct: 232 GVFLGAAPHNIEFLQQKTGAFEGFRGCVRLLVVNGE 267
Score = 35.5 bits (78), Expect = 0.016
Identities = 25/113 (22%), Positives = 48/113 (42%)
Frame = +3
Query: 3 QFLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELN 182
+F L G+G + + + ++ W T+ + R + + + V+ P +P+ L +
Sbjct: 666 RFALNLGSGTIVLTHPKRIEDERWITVEVIRKRNLVKLSVNGEDPITGFAPEGAEQLNVY 725
Query: 183 QPLYIGGVPDFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+ ++IG D P D +G GCI L + A N+Q+C
Sbjct: 726 RNIFIGNNFTPDGSP-DGRDFTGLDGCIISLRFDQTTISHPKQAKTAINIQDC 777
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNS--GPFIAESPDQWTVLEL 179
F+ E G+G+ ++G+ P+ LN WHT+RI R ++M V+ + ++S + +
Sbjct: 1191 FVYELGSGLSYIRGE-PIPLNSWHTVRIERLAKDVSMFVNETLVKKHTSQSKNAHLDISK 1249
Query: 180 NQPLYIGGVPD 212
LY+G VP+
Sbjct: 1250 KDALYVGFVPE 1260
Score = 35.1 bits (77), Expect = 0.021
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 66 NEWHTIRISRTGSRLTMDVDNSGPF-IAESPDQWTVLELNQPLYIGGV-PDFDQLPIDLA 239
N WH++ R + + VD+ + SP L+ N +Y+GG P +L L
Sbjct: 1388 NHWHSVSFRRKERKCELWVDSKKILHVVASPGDVN-LDSNGLVYLGGANPKKHKLLKSLN 1446
Query: 240 GASGFVGCISMLILGNEEKNIMALALEK-ENVQNCF 344
++ FVGC+ L + E N++ +L+ E + C+
Sbjct: 1447 LSNKFVGCVKNLKIFGAEVNLLVDSLKSIETPKYCY 1482
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 6 FLLETGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNS--GPFIAESPDQWTVLEL 179
F+ E G+G+ ++G+ P+ LN WHT+RI R ++M V+ + ++S + +
Sbjct: 1143 FVYELGSGLSYIRGE-PIPLNSWHTVRIERLAKDVSMFVNETLVKKHTSQSKNAHLDISK 1201
Query: 180 NQPLYIGGVPD 212
LY+G VP+
Sbjct: 1202 KDALYVGFVPE 1212
Score = 35.1 bits (77), Expect = 0.021
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 66 NEWHTIRISRTGSRLTMDVDNSGPF-IAESPDQWTVLELNQPLYIGGV-PDFDQLPIDLA 239
N WH++ R + + VD+ + SP L+ N +Y+GG P +L L
Sbjct: 1378 NHWHSVSFRRKERKCELWVDSKKILHVVASPGDVN-LDSNGLVYLGGANPKKHKLLKSLN 1436
Query: 240 GASGFVGCISMLILGNEEKNIMALALEK-ENVQNCF 344
++ FVGC+ L + E N++ +L+ E + C+
Sbjct: 1437 LSNKFVGCVKNLKIFGAEVNLLVDSLKSIETPKYCY 1472
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 40.7 bits (91), Expect = 4e-04
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Frame = +3
Query: 9 LLETGAGIVKVKG-DRPLQLNEWHTI---RISRTGSRLT--MDVDNSGPFIAESPDQWTV 170
++ G+G+V+++ + EWH + R+SRTGS + + +D S P ++ +
Sbjct: 530 IINLGSGVVRLQTTSMKVSDGEWHHVQLDRLSRTGSVIVDAIKIDFSTPGVSAN------ 583
Query: 171 LELNQPLYIGGVPD----FDQLPIDLAGASGFVGCISMLILGN---------EEKNIMAL 311
L ++ P++IG VP+ + +A G+ GCI + + E N +
Sbjct: 584 LIIDDPIFIGNVPNNSLVYPSSVWSIALQKGYTGCIKNIRMNGVSTKIGQEFEASNSTGI 643
Query: 312 ALEKENVQNCFTCAPNLCLNNGVCQEALTEHGYVC 416
L C PN C N G C + L C
Sbjct: 644 ELGCSLSNELDICEPNPCQNFGKCSKNLNSFDCDC 678
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 36.7 bits (81), Expect = 0.007
Identities = 28/104 (26%), Positives = 45/104 (43%)
Frame = +3
Query: 30 IVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVP 209
I+K G+R + +WH I + + L + +D+ GP E D T + + +Y+GGV
Sbjct: 2985 ILKHLGNR-INDGQWHDITVEKKNRSLKLIIDSLGP--VEMTDCPTPKVMKKRVYVGGVI 3041
Query: 210 DFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+ L G GCI + N N + +NV C
Sbjct: 3042 SRHRRQFGLT-TPGLDGCIRDFEMNNRIFNNLDEPSTSKNVMPC 3084
Score = 33.5 bits (73), Expect = 0.063
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 21 GAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGP-FIAESPDQWTVLEL-NQPLY 194
G + ++ + HT++ RTGS + + VD+ F + T L + N+ Y
Sbjct: 2534 GGSVAELTSQNVYNDGKEHTVKAIRTGSEMYLQVDSDADRFNTVITGENTALNIENENHY 2593
Query: 195 IGGVP-DFDQLPIDLAGASGFVGCI 266
+ GVP ++ +GF+GCI
Sbjct: 2594 VAGVPMTLNKEVFGDINWNGFIGCI 2618
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 36.7 bits (81), Expect = 0.007
Identities = 28/104 (26%), Positives = 45/104 (43%)
Frame = +3
Query: 30 IVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVP 209
I+K G+R + +WH I + + L + +D+ GP E D T + + +Y+GGV
Sbjct: 2985 ILKHLGNR-INDGQWHDITVEKKNRSLKLIIDSLGP--VEMTDCPTPKVMKKRVYVGGVI 3041
Query: 210 DFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+ L G GCI + N N + +NV C
Sbjct: 3042 SRHRRQFGLT-TPGLDGCIRDFEMNNRIFNNLDEPSTSKNVMPC 3084
Score = 33.5 bits (73), Expect = 0.063
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 21 GAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGP-FIAESPDQWTVLEL-NQPLY 194
G + ++ + HT++ RTGS + + VD+ F + T L + N+ Y
Sbjct: 2534 GGSVAELTSQNVYNDGKEHTVKAIRTGSEMYLQVDSDADRFNTVITGENTALNIENENHY 2593
Query: 195 IGGVP-DFDQLPIDLAGASGFVGCI 266
+ GVP ++ +GF+GCI
Sbjct: 2594 VAGVPMTLNKEVFGDINWNGFIGCI 2618
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 36.7 bits (81), Expect = 0.007
Identities = 28/104 (26%), Positives = 45/104 (43%)
Frame = +3
Query: 30 IVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLELNQPLYIGGVP 209
I+K G+R + +WH I + + L + +D+ GP E D T + + +Y+GGV
Sbjct: 2985 ILKHLGNR-INDGQWHDITVEKKNRSLKLIIDSLGP--VEMTDCPTPKVMKKRVYVGGVI 3041
Query: 210 DFDQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
+ L G GCI + N N + +NV C
Sbjct: 3042 SRHRRQFGLT-TPGLDGCIRDFEMNNRIFNNLDEPSTSKNVMPC 3084
Score = 33.5 bits (73), Expect = 0.063
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 21 GAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGP-FIAESPDQWTVLEL-NQPLY 194
G + ++ + HT++ RTGS + + VD+ F + T L + N+ Y
Sbjct: 2534 GGSVAELTSQNVYNDGKEHTVKAIRTGSEMYLQVDSDADRFNTVITGENTALNIENENHY 2593
Query: 195 IGGVP-DFDQLPIDLAGASGFVGCI 266
+ GVP ++ +GF+GCI
Sbjct: 2594 VAGVPMTLNKEVFGDINWNGFIGCI 2618
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 32.7 bits (71), Expect = 0.11
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 18 TGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL---NQP 188
TG GIV K + +WH I ISR R M VD+ A SP TV+ L +Q
Sbjct: 3801 TGTGIVTSKTS--VVDGQWHRIAISRRQRRTRMTVDDEDLQEAFSPIGSTVINLHRYSQK 3858
Query: 189 LYIGGVPDFDQL 224
L +G D +L
Sbjct: 3859 LVLGAKVDDGEL 3870
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 32.7 bits (71), Expect = 0.11
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 18 TGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL---NQP 188
TG GIV K + +WH I ISR R M VD+ A SP TV+ L +Q
Sbjct: 3801 TGTGIVTSKTS--VVDGQWHRIAISRRQRRTRMTVDDEDLQEAFSPIGSTVINLHRYSQK 3858
Query: 189 LYIGGVPDFDQL 224
L +G D +L
Sbjct: 3859 LVLGAKVDDGEL 3870
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 32.7 bits (71), Expect = 0.11
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 18 TGAGIVKVKGDRPLQLNEWHTIRISRTGSRLTMDVDNSGPFIAESPDQWTVLEL---NQP 188
TG GIV K + +WH I ISR R M VD+ A SP TV+ L +Q
Sbjct: 3801 TGTGIVTSKTS--VVDGQWHRIAISRRQRRTRMTVDDEDLQEAFSPIGSTVINLHRYSQK 3858
Query: 189 LYIGGVPDFDQL 224
L +G D +L
Sbjct: 3859 LVLGAKVDDGEL 3870
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 30.7 bits (66), Expect = 0.44
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDN---------SGPFIAE--SPDQWTVLELNQPLYIGGV-PDF 215
WH I +++ G R+ + VDN AE +PD L + P+ IGG+ P
Sbjct: 2377 WHDISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVTPVQIGGLAPLS 2436
Query: 216 DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
Q +G GC+ L + ++ ++ A E+ + + C
Sbjct: 2437 GQDYPQTIPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGC 2478
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 30.7 bits (66), Expect = 0.44
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDN---------SGPFIAE--SPDQWTVLELNQPLYIGGV-PDF 215
WH I +++ G R+ + VDN AE +PD L + P+ IGG+ P
Sbjct: 2377 WHDISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVTPVQIGGLAPLS 2436
Query: 216 DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
Q +G GC+ L + ++ ++ A E+ + + C
Sbjct: 2437 GQDYPQTIPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGC 2478
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 30.7 bits (66), Expect = 0.44
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDN---------SGPFIAE--SPDQWTVLELNQPLYIGGV-PDF 215
WH I +++ G R+ + VDN AE +PD L + P+ IGG+ P
Sbjct: 680 WHDISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVTPVQIGGLAPLS 739
Query: 216 DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
Q +G GC+ L + ++ ++ A E+ + + C
Sbjct: 740 GQDYPQTIPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGC 781
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 30.7 bits (66), Expect = 0.44
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDN---------SGPFIAE--SPDQWTVLELNQPLYIGGV-PDF 215
WH I +++ G R+ + VDN AE +PD L + P+ IGG+ P
Sbjct: 2377 WHDISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVTPVQIGGLAPLS 2436
Query: 216 DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
Q +G GC+ L + ++ ++ A E+ + + C
Sbjct: 2437 GQDYPQTIPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGC 2478
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 30.7 bits (66), Expect = 0.44
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDN---------SGPFIAE--SPDQWTVLELNQPLYIGGV-PDF 215
WH I +++ G R+ + VDN AE +PD L + P+ IGG+ P
Sbjct: 2377 WHDISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVTPVQIGGLAPLS 2436
Query: 216 DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
Q +G GC+ L + ++ ++ A E+ + + C
Sbjct: 2437 GQDYPQTIPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGC 2478
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 30.7 bits (66), Expect = 0.44
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 72 WHTIRISRTGSRLTMDVDN---------SGPFIAE--SPDQWTVLELNQPLYIGGV-PDF 215
WH I +++ G R+ + VDN AE +PD L + P+ IGG+ P
Sbjct: 680 WHDISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVTPVQIGGLAPLS 739
Query: 216 DQLPIDLAGASGFVGCISMLILGNEEKNIMALALEKENVQNC 341
Q +G GC+ L + ++ ++ A E+ + + C
Sbjct: 740 GQDYPQTIPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGC 781
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 249 GFVGCISMLILGNEEKNIMALALEKEN---VQNCFT-CAPNLCLNNGVCQE 389
G +GC+ +++ +E N+ + E + C T C + C N C E
Sbjct: 834 GLIGCVRNVLINDEPVNLQEIVKTSEKTGITETCDTRCTADFCQNGAKCYE 884
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 157 SGDSAINGPLLSTSIVNLEPVLLMRIVCHSLSCKGRSPLTLTIPAPV 17
S A+NGP + V +PVL + + +P L PAP+
Sbjct: 23 SAQVAVNGPFMGRYYVAAKPVLAPGVAPVAAPVLAAAPTVLAAPAPL 69
>Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical
protein T03D8.1c protein.
Length = 549
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 319 SRARAMMFFSSLPSISMLIHPTKPDAPARSIGSWS---KSGTPP 197
+R++A + + +SM + PT P + S S+S KSG PP
Sbjct: 433 TRSKADEWLDDVLRVSMSMSPTSPSSDPPSTSSYSVLPKSGPPP 476
>Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical
protein T03D8.1b protein.
Length = 401
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 319 SRARAMMFFSSLPSISMLIHPTKPDAPARSIGSWS---KSGTPP 197
+R++A + + +SM + PT P + S S+S KSG PP
Sbjct: 285 TRSKADEWLDDVLRVSMSMSPTSPSSDPPSTSSYSVLPKSGPPP 328
>Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical
protein T03D8.1a protein.
Length = 593
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 319 SRARAMMFFSSLPSISMLIHPTKPDAPARSIGSWS---KSGTPP 197
+R++A + + +SM + PT P + S S+S KSG PP
Sbjct: 477 TRSKADEWLDDVLRVSMSMSPTSPSSDPPSTSSYSVLPKSGPPP 520
>AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adapter
1s protein.
Length = 549
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 319 SRARAMMFFSSLPSISMLIHPTKPDAPARSIGSWS---KSGTPP 197
+R++A + + +SM + PT P + S S+S KSG PP
Sbjct: 433 TRSKADEWLDDVLRVSMSMSPTSPSSDPPSTSSYSVLPKSGPPP 476
>AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adapter
1 protein.
Length = 593
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 319 SRARAMMFFSSLPSISMLIHPTKPDAPARSIGSWS---KSGTPP 197
+R++A + + +SM + PT P + S S+S KSG PP
Sbjct: 477 TRSKADEWLDDVLRVSMSMSPTSPSSDPPSTSSYSVLPKSGPPP 520
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
CA N C N+G C L Y+C
Sbjct: 166 CASNPCQNSGNCTMVLENSNYLC 188
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical protein
F20B10.1 protein.
Length = 1180
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 240 GASGFVGCISMLILGNEEKNIMALALEKEN----VQNCFTCAPNLCLNNGVCQEALTEHG 407
G++GF G I + L E + A ++ + + C P+LC N G C + G
Sbjct: 823 GSTGFAGVIRNVHLCGVELALGQYARKETERGVAIGDDGYCRPDLCQNGGQCVDKY--DG 880
Query: 408 YVC 416
YVC
Sbjct: 881 YVC 883
>AF101319-3|AAC69355.1| 331|Caenorhabditis elegans Hypothetical
protein K08D9.5 protein.
Length = 331
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 382 QTPLLRQRLGAQVKQFWTFSFS 317
+ P+ +Q LG +++QFW F FS
Sbjct: 204 ERPISKQELG-ELRQFWNFDFS 224
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C N CLNNG C+ Y C
Sbjct: 639 CESNPCLNNGTCRTTKGYSTYFC 661
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C N CLNNG C+ Y C
Sbjct: 639 CESNPCLNNGTCRTTKGYSTYFC 661
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C N CLNNG C+ Y C
Sbjct: 639 CESNPCLNNGTCRTTKGYSTYFC 661
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 36 KVKGDRPLQLN--EWHTIRISRTGSRLTMDVDN 128
K++ D ++N EWHT+ + + ++TM +D+
Sbjct: 1402 KMENDVENRINDGEWHTVALEYSNKQITMSLDD 1434
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 36 KVKGDRPLQLN--EWHTIRISRTGSRLTMDVDN 128
K++ D ++N EWHT+ + + ++TM +D+
Sbjct: 1402 KMENDVENRINDGEWHTVALEYSNKQITMSLDD 1434
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +1
Query: 319 RKKMSRIVSLVPLISVSTMVSVRKHLL 399
++++S+IV+ + +ISV+ S++ HLL
Sbjct: 5 KQRLSQIVAAIQIISVALSHSIQTHLL 31
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 CISMLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEALTEHG 407
CI + + +EE N+ L+ + + A C+N G C+E EHG
Sbjct: 704 CIPPVTIEDEE-NLEKLSHIGSALMAEYCEAGVACMNGGACRELQNEHG 751
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 CISMLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEALTEHG 407
CI + + +EE N+ L+ + + A C+N G C+E EHG
Sbjct: 704 CIPPVTIEDEE-NLEKLSHIGSALMAEYCEAGVACMNGGACRELQNEHG 751
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 348 CAPNLCLNNGVCQEALTEHGYVC 416
C+P CL NGVC + + C
Sbjct: 103 CSPQPCLQNGVCSSSGGTYSCAC 125
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 36 KVKGDRPLQLN--EWHTIRISRTGSRLTMDVDN 128
K++ D ++N EWHT+ + + ++TM +D+
Sbjct: 1402 KMENDVENRINDGEWHTVALEYSNKQITMSLDD 1434
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 CISMLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEALTEHG 407
CI + + +EE N+ L+ + + A C+N G C+E EHG
Sbjct: 704 CIPPVTIEDEE-NLEKLSHIGSALMAEYCEAGVACMNGGACRELQNEHG 751
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 CISMLILGNEEKNIMALALEKENVQNCFTCAPNLCLNNGVCQEALTEHG 407
CI + + +EE N+ L+ + + A C+N G C+E EHG
Sbjct: 704 CIPPVTIEDEE-NLEKLSHIGSALMAEYCEAGVACMNGGACRELQNEHG 751
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,494,263
Number of Sequences: 27780
Number of extensions: 190358
Number of successful extensions: 756
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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