Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A21
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   2.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   3.6  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    20   6.3  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    20   6.3  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    20   6.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   6.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   6.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   8.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   8.3  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     20   8.3  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 259 IPVPQAPSSTFLHP 218
           +PVPQ   ST L P
Sbjct: 796 VPVPQVNDSTILSP 809



 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 145 TNSLETVMKEHKIIK 189
           TN  E V+KE KII+
Sbjct: 433 TNISEEVLKEAKIIQ 447


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 266 GVNPCSASTVQHFL 225
           GV+ C A+ V HFL
Sbjct: 25  GVDECQATPVIHFL 38


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 169 KEHKIIKTSSSGF*KNTDARK 231
           KEHKII + S+ +  N +  K
Sbjct: 77  KEHKIISSLSNNYNYNNNNYK 97


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 169 KEHKIIKTSSSGF*KNTDARK 231
           KEHKII + S+ +  N +  K
Sbjct: 77  KEHKIISSLSNNYNYNNNNYK 97


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 169 KEHKIIKTSSSGF*KNTDARK 231
           KEHKII + S+ +  N +  K
Sbjct: 77  KEHKIISSLSNNYNYNNNNYK 97


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -1

Query: 113 LILYTL*RYTFRSRMK---NLIRRH 48
           ++ Y + RY FRS ++   N++  H
Sbjct: 344 IVFYIISRYVFRSALEDYCNIVATH 368


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 310 ASTETRLKPSSTSIMESIPVPQAPSSTF 227
           A+  T   PS      S P P +PSS F
Sbjct: 73  AAAITSTSPSYPGGGSSSPSPSSPSSFF 100


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 141 TLELPYRLHTDPLHPLKVYLQISNEKLDPQ 52
           +L  P R+H  P   + +   IS   L+P+
Sbjct: 619 SLSEPLRIHVSPTTYILLKYPISGFDLEPR 648


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 89  YTFRSRMKNLIRRHYSICDAIR 24
           Y FR   K L      +CDA++
Sbjct: 483 YAFRDMHKELCDGKPGLCDAMK 504


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 145 TNSLETVMKEHKIIK 189
           TN  E V+KE KII+
Sbjct: 139 TNISEEVLKEAKIIQ 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,894
Number of Sequences: 438
Number of extensions: 1576
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)