Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A21
(317 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20020.1 68416.m02533 protein arginine N-methyltransferase fa... 31 0.17
At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A... 30 0.29
At3g12270.1 68416.m01532 protein arginine N-methyltransferase fa... 30 0.39
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 28 1.2
At3g23980.1 68416.m03012 dentin sialophosphoprotein-related cont... 27 2.1
At4g35560.1 68417.m05053 expressed protein 27 2.7
At3g61960.1 68416.m06959 protein kinase family protein contains ... 27 3.6
At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1... 27 3.6
At3g44690.1 68416.m04806 expressed protein 26 4.8
At5g59710.1 68418.m07485 transcription regulator NOT2/NOT3/NOT5 ... 26 6.3
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 26 6.3
At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit, c... 25 8.3
At1g76090.1 68414.m08836 S-adenosyl-methionine-sterol-C-methyltr... 25 8.3
>At3g20020.1 68416.m02533 protein arginine N-methyltransferase
family protein similar to SP|Q96LA8 Protein arginine
N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
Length = 435
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 171 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASD 317
RT+ Y++ ++ K V+D CGTGI S+ G V +VDASD
Sbjct: 102 RTETYREAIMQHQSLIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASD 151
>At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 497
Score = 30.3 bits (65), Expect = 0.29
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -2
Query: 307 STETRLKPSSTSIMESIPVPQAPSSTFLHPCFFKSPMRKSL*FC--VLSLLSPMNLFHAR 134
S T PSS S ES Q+PS T HP F +P+ + L V S P+ LF +
Sbjct: 39 SRTTTPAPSSVSNGESQTTAQSPSQTPNHPMFTTTPILEVLPLLKDVSSSDRPL-LFMKK 97
Query: 133 AALPSAY*SFTPSEGIPSDLE*K 65
A + S + F+ + +P + E K
Sbjct: 98 AHMCSCHCDFSDTLIMPREKEIK 120
>At3g12270.1 68416.m01532 protein arginine N-methyltransferase
family protein similar to protein arginine
N-methyltransferase 3 from {Rattus norvegicus}
SP|O70467, {Homo sapiens} SP|O60678
Length = 590
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 171 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFN-LVSVDASD 317
RT+ Y+D L+ V+D CGTGI S+ G + +V+V+AS+
Sbjct: 260 RTEAYRDALLKNPTLLNGSVVMDVGCGTGILSLFAAKAGASRVVAVEASE 309
>At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178:
Krr1 family
Length = 638
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 87 IPSEGVKDQYADGKAARAWNKFIGDSNERTQN--YKDFLIGLLKKHGCKKV 233
+ EG D D + A+ +++ GD E T+N KD+L+ L K ++V
Sbjct: 188 VEKEGDDDVEVDEELAKKMDEYYGDEAEATENQFLKDYLVKQLWKEKEERV 238
>At3g23980.1 68416.m03012 dentin sialophosphoprotein-related
contains weak similarity to Dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 736
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 316 SEASTETRLKPSSTSIMESIPVPQAPSSTFLHP 218
+ A +E +K S S ++S+ + +AP + + HP
Sbjct: 249 NSAKSEATVKRSRPSFLDSLNISRAPETQYQHP 281
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 75 RSEGIPSEGVKDQYADGKAARAWNKFIGDSNERTQ 179
+SE IP +K YA+GKA+R + IG S+ Q
Sbjct: 132 KSEKIPIASLKWVYAEGKASRVY--VIGSSSNSLQ 164
>At3g61960.1 68416.m06959 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 626
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 LPHRAFEKTRMQESAGRCLRNRD*LHDA 274
+PH +FEKTR +++ G+C N+ + D+
Sbjct: 326 MPHTSFEKTR-KDTEGQCSSNQSGVVDS 352
>At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 785
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -1
Query: 248 ASTVQHFLASVFFQKPDEEVFIILCSFITVSNE 150
+ +VQH +A++FF PD+ + LC ++T +++
Sbjct: 607 SDSVQH-VAALFFGGPDDREALSLCKWLTNNSQ 638
>At3g44690.1 68416.m04806 expressed protein
Length = 1176
Score = 26.2 bits (55), Expect = 4.8
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +3
Query: 90 PSEGVKDQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSM 269
PS D +G+ ARA + G ++ ++Y D+ G H + L GID
Sbjct: 802 PSLNKSDILVNGEEARALERRRGSFDDGEESYMDYKRGDAYLHYESQQLKKDHDYGIDDR 861
Query: 270 MLVDEGFNLVSVDASD 317
+ D + + VD D
Sbjct: 862 IYRDVNSSDIIVDHGD 877
>At5g59710.1 68418.m07485 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 556
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +1
Query: 64 FFIRDLKVYLQRV*RISMQTVRQLERGT------NSLETVMKEHKIIK 189
F+ ++L+V+ RV ++ ERGT NS +TV KEH +IK
Sbjct: 497 FYHKELRVWFFRVGEPLVRAATY-ERGTYEYLDPNSFKTVRKEHFVIK 543
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 286 PSSTSIMESIPVPQAPSSTFLHP 218
PS +S++ SIP AP S L+P
Sbjct: 39 PSPSSVVSSIPSSPAPQSPSLNP 61
>At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit,
component I-2 (ASA2) identical to SP|P32069
Length = 621
Score = 25.4 bits (53), Expect = 8.3
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -2
Query: 250 PQAPSSTFLHPCFFKSPMRKSL*FCVLSLLSPMNLFHARAALPSAY*SFTPS 95
P PS F P KSP SL +L++ L H LPS S+TPS
Sbjct: 30 PHFPSLRF--PLSLKSPPATSL-----NLVAGSKLLHFSRRLPSIKCSYTPS 74
>At1g76090.1 68414.m08836
S-adenosyl-methionine-sterol-C-methyltransferase
identical to
S-adenosyl-methionine-sterol-C-methyltransferase
GI:2246456 from [Arabidopsis thaliana]
Length = 359
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 168 ERTQNYKDFLIGLLKKHGCKKVLDGACGTG 257
+ T+ +++ + L+K +K+LD CG G
Sbjct: 106 DATRIHEEMAVDLIKVKPGQKILDAGCGVG 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,642,460
Number of Sequences: 28952
Number of extensions: 130055
Number of successful extensions: 428
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 340508912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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