Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A20
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.067
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.1  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   2.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 0.067
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
 Frame = +3

Query: 132 NGQNTQRFPE-CSEP-CING-VCTEGNQ---CVCNPGYSMDLTDRRCKPRCAGGCPNG-L 290
           +G N Q   E C+E  C+NG  C +G     C C PG++      R     +  C NG  
Sbjct: 16  SGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNGAT 75

Query: 291 CSGPN---LCICNMGY 329
           C        C C  GY
Sbjct: 76  CQDHTTHYTCHCPYGY 91


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
 Frame = +3

Query: 174 CINGVCTEGNQCVCNPGYSMDLTDRRCKPRCAGGCPNGLCSGPNL----CICNMGY 329
           C+N +   G++C C PG++               C NG      +    CIC  G+
Sbjct: 44  CVN-LPGVGHRCQCQPGFTGKYCHENINDCKVNPCENGGTCVDKINAFQCICKEGW 98


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 223 DILWILPIEGASPV-VQVDVP 282
           DI  +LP +GASP+ + V +P
Sbjct: 183 DIALVLPTQGASPLPLLVPIP 203


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +1

Query: 232 WILPIEGASPVVQVDVPMDSVQDLIFAFV 318
           W +   G     Q D+P+D    ++++F+
Sbjct: 31  WAIYRPGIGRYAQEDLPVDLCTHIVYSFI 59


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 234 P*NIRDCRHIDCLP 193
           P N +DC   DC+P
Sbjct: 77  PYNTQDCYREDCIP 90


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +1

Query: 232 WILPIEGASPVVQ 270
           W+ P +G SP+ +
Sbjct: 916 WVAPFDGNSPITR 928


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
 Frame = -3

Query: 275 STCTTGLA----PSIGKIHRI 225
           +TC + LA    P +GK HRI
Sbjct: 97  NTCRSALALLLSPEVGKDHRI 117


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 74  IWLVWFMRLVERIRSWL 24
           IWL+ F  L+  + +W+
Sbjct: 122 IWLLIFAYLIPEVGTWI 138


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 74  IWLVWFMRLVERIRSWL 24
           IWL+ F  L+  + +W+
Sbjct: 122 IWLLIFAYLIPEVGTWI 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,866
Number of Sequences: 336
Number of extensions: 3183
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)