Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A20
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    26   0.18 
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    26   0.18 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    26   0.24 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.55 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.95 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   0.95 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   3.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.8  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   6.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   6.7  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
 Frame = +3

Query: 249 RCKPRCAGGCPN----GLC---SGPNLCICNMGYHKDTSVKGRAVCVKR 374
           RC  RC   CPN     LC     P  C+C +GY ++     + VCV R
Sbjct: 45  RCDGRCQRFCPNVVPKPLCIKICAPG-CVCRLGYLRNK----KKVCVPR 88


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
 Frame = +3

Query: 249 RCKPRCAGGCPN----GLC---SGPNLCICNMGYHKDTSVKGRAVCVKR 374
           RC  RC   CPN     LC     P  C+C +GY ++     + VCV R
Sbjct: 45  RCDGRCQRFCPNVVPKPLCIKICAPG-CVCRLGYLRNK----KKVCVPR 88


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 183 GVCTEGNQCVCN 218
           G+C EG QC CN
Sbjct: 77  GICAEGMQCSCN 88


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 146 CVLSVNMASLDRGQIVGAVGGYVMIWLVWFM 54
           C+  V   +   G +   VGG+V  WL +F+
Sbjct: 294 CINRVARETKTAGTLAVVVGGFVACWLPFFI 324


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 207 CVCNPGYSMDLTDRRC 254
           C C PGY  D+  + C
Sbjct: 247 CHCKPGYQADVEKQEC 262


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
 Frame = +3

Query: 3   PNGTI-TYQ--PRPDPFYQPHKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQRFPECS 167
           PN  + TY   PR  P+Y   +      H+  N   D  +     V   +   +PE S
Sbjct: 321 PNDEVATYDNTPRDFPYYMYSREQYSQSHLISNENRDFQTTPTVSVEQPHLFLYPEVS 378


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
          protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 92 VGGYVMIWLVWFMRLVER 39
          VGG+++ WL +F   + R
Sbjct: 15 VGGFILCWLPFFTMYLVR 32


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 92  VGGYVMIWLVWFMRLVER 39
           VGG+++ WL +F   + R
Sbjct: 463 VGGFILCWLPFFTMYLVR 480


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = -2

Query: 357 PDLSHSCLYGSPCYKCKD*VLNRVHWDIH 271
           P ++ +  +   CY C++  L   H  +H
Sbjct: 79  PSVASTTGFSKECYCCRESYLKERHITLH 107


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = -2

Query: 357 PDLSHSCLYGSPCYKCKD*VLNRVHWDIH 271
           P ++ +  +   CY C++  L   H  +H
Sbjct: 79  PSVASTTGFSKECYCCRESYLKERHITLH 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,174
Number of Sequences: 438
Number of extensions: 3208
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)