Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A20
(475 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42620.1 68418.m05188 expressed protein 39 0.002
At1g16160.1 68414.m01936 protein kinase family protein contains ... 36 0.011
At2g23945.1 68415.m02859 chloroplast nucleoid DNA-binding protei... 33 0.13
At2g38380.1 68415.m04715 peroxidase 22 (PER22) (P22) (PRXEA) / b... 30 0.70
At5g26230.1 68418.m03123 expressed protein predicted protein, Ar... 29 1.2
At3g14520.1 68416.m01840 terpene synthase/cyclase family protein... 29 1.6
At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identic... 28 2.8
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 3.7
At4g08770.1 68417.m01446 peroxidase, putative identical to class... 28 3.7
At5g58640.1 68418.m07348 selenoprotein-related contains weak sim... 27 4.9
At5g36910.1 68418.m04424 thionin (THI2.2) identical to thionin [... 27 4.9
At2g12400.1 68415.m01339 expressed protein 27 4.9
At4g03230.1 68417.m00442 S-locus lectin protein kinase family pr... 27 6.5
At3g49120.1 68416.m05366 peroxidase, putative identical to perox... 27 8.6
At3g32980.1 68416.m04183 peroxidase 32 (PER32) (P32) (PRXR3) ide... 27 8.6
At2g47310.1 68415.m05906 flowering time control protein-related ... 27 8.6
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 159 ECSEPC-INGVCTEGNQCVCNPGY-SMDLTDRRCKPRCAGGCPNGLCSGPNLCICNMGY 329
+C C NG C +G +C C GY D +R C C G +G C+ +CIC G+
Sbjct: 602 QCPNSCNFNGDCVDG-KCRCLLGYHGHDCRNRSCPNNCNG---HGKCTTQGVCICENGF 656
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 162 CSEPCI-NGVCTEGNQCVCNPGYS-MDLTDRRCKPRCA---GGCPNGLC 293
C C +G CT C+C G++ +D + C +C+ G C NG+C
Sbjct: 634 CPNNCNGHGKCTTQGVCICENGFTGIDCSTAICDEQCSLHGGVCDNGVC 682
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Frame = +3
Query: 162 CSEPCINGVCTEGNQCVCNPGYSMDLTDRRC--------KPRCAGGC-PNGLCSGPNLC 311
C +G G+ C+C GY +++ R C P GGC N C GPN+C
Sbjct: 250 CINLTYSGSYLSGDSCLCEYGYFSEMSYRNCYCSLGFTGNPYLRGGCIDNDDCKGPNIC 308
>At2g23945.1 68415.m02859 chloroplast nucleoid DNA-binding
protein-related contains weak similarity to
GP|2541876|dbj|BAA22813.1||D26015 CND41, chloroplast
nucleoid DNA binding protein {Nicotiana tabacum}
Length = 458
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 210 VCNPGYSMDLTDRRCKPRCAGGCPNGLCSGPNLCICNMGYHKDTSVKG 353
V NP S + C R PNG C N C+ Y T KG
Sbjct: 139 VFNPALSSTFVECSCDDRFCRYAPNGHCGSSNKCVYEQVYISGTGSKG 186
>At2g38380.1 68415.m04715 peroxidase 22 (PER22) (P22) (PRXEA) /
basic peroxidase E identical to SP|P24102 Peroxidase 22
precursor (EC 1.11.1.7) (Atperox P22) (ATPEa) (Basic
peroxidase E) {Arabidopsis thaliana}; identical to cDNA
class III peroxidase ATPEa, GI:17530569
Length = 349
Score = 30.3 bits (65), Expect = 0.70
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 33 PDPFYQPHKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQRFPECSEPCINGVCTEGNQCV 212
P PF+ + + NRT+DL ++ GGH G+ +F NG T
Sbjct: 168 PSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNG--TNSPDPS 225
Query: 213 CNPGYSMDLTDRRCKPRCAGG 275
NP Y ++L RR P+ G
Sbjct: 226 LNPTYLVEL--RRLCPQNGNG 244
>At5g26230.1 68418.m03123 expressed protein predicted protein,
Arabidopsis thaliana
Length = 341
Score = 29.5 bits (63), Expect = 1.2
Identities = 25/95 (26%), Positives = 39/95 (41%)
Frame = +3
Query: 21 YQPRPDPFYQPHKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQRFPECSEPCINGVCTEG 200
Y + P Y+ P Q + T + ++ S G ++ G T + P + V + G
Sbjct: 195 YMKKVKPLYEKLSPKQSSNIKTESSSSLKDS--GNNIRGTTTVTTVTAA-PTV--VSSGG 249
Query: 201 NQCVCNPGYSMDLTDRRCKPRCAGGCPNGLCSGPN 305
+ G M T R RCA CP+ + S PN
Sbjct: 250 GLSISFSGNLMKYTKRG---RCAASCPSSMRSSPN 281
>At3g14520.1 68416.m01840 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 605
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 395 LPLKETKKHHLVC 433
LPLK KKHHLVC
Sbjct: 37 LPLKPAKKHHLVC 49
>At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identical
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
pathogen infection (PMID:10380805)
Length = 735
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 CSEP--CINGVCTEGNQCVCNPGYSMDLTDRRCK 257
CS+P C N V G C C GY +D T CK
Sbjct: 297 CSDPKTCRNKV--GGFYCKCQSGYRLDTTTMSCK 328
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 21 YQPRPDPFYQPHKPNQPDHHITP 89
+ P P P+ PH+P P H + P
Sbjct: 64 HPPPPSPYPHPHQPPPPPHVLPP 86
>At4g08770.1 68417.m01446 peroxidase, putative identical to class
III peroxidase ATP38 [Arabidopsis thaliana]
gi|17530568|gb|AAL40851; similar to peroxidase C2
precursor [Armoracia rusticana] SWISS-PROT: P17179;
identical to cDNA class III peroxidase ATP38 GI:17530567
Length = 346
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 33 PDPFYQPHKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQRF 155
P PF+ ++ ++ +R +DL ++ GGH G+N +F
Sbjct: 161 PAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQF 201
>At5g58640.1 68418.m07348 selenoprotein-related contains weak
similarity to Selenoprotein W (Swiss-Prot:P49904)
[Rattus norvegicus]
Length = 228
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 33 PDPFYQPHKPNQPDHHITPNRTN 101
P P QPH+P+QP H +R N
Sbjct: 27 PPPKPQPHRPHQPPHIPHQHRPN 49
>At5g36910.1 68418.m04424 thionin (THI2.2) identical to thionin
[Arabidopsis thaliana] gi|1181533|gb|AAC41679
Length = 134
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 189 CTEGNQCVCNPGYSMDLTDR---RCKPRCAGGCPNGLC 293
C +Q +C PGY+ D+ + C GC + +C
Sbjct: 56 CKNTSQTICPPGYTNDILENSGDAVNEYCKLGCASSVC 93
>At2g12400.1 68415.m01339 expressed protein
Length = 541
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 96 TNDLSSVQGGHVNGQNTQRFPECSEPCINGVCTEGNQCVCNPGYSMDLTDRRCKP 260
T L ++ ++ + FP P +CNP ++ DL+DR+C+P
Sbjct: 354 TYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNP-FNADLSDRQCQP 407
>At4g03230.1 68417.m00442 S-locus lectin protein kinase family
protein contains Pfam domins, PF00069: Protein kinase
domain, PF00954: S-locus glycoprotein family and
PF01453: Lectin (probable mannose binding)
Length = 852
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +3
Query: 159 ECS--EPCIN-GVCTEGNQ--CVCNPGYSMDLTDRRCKPRCAGGC 278
ECS C N G C N+ C C PG+ + ++ K +GGC
Sbjct: 288 ECSVYNACGNFGSCNSKNEEMCKCLPGFRPNFLEKWVKGDFSGGC 332
>At3g49120.1 68416.m05366 peroxidase, putative identical to
peroxidase [Arabidopsis thaliana] gi|405611|emb|CAA50677
Length = 353
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 33 PDPFYQPHKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQRF 155
P PF+ + ++ +R +DL ++ GGH G+N +F
Sbjct: 169 PAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQF 209
>At3g32980.1 68416.m04183 peroxidase 32 (PER32) (P32) (PRXR3)
identical to SP|Q9LHB9 Peroxidase 32 precursor (EC
1.11.1.7) (Atperox P32) (PRXR3) (ATP16a) {Arabidopsis
thaliana}
Length = 352
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 33 PDPFYQPHKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQRF 155
P PF+ + ++ +R +DL ++ GGH G+N +F
Sbjct: 168 PAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQF 208
>At2g47310.1 68415.m05906 flowering time control protein-related /
FCA gamma-related
Length = 512
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 27 PRPDPFYQPHKPNQPDH--HITPNRTNDLSSVQGGHVNGQNTQRFPECSEPCING 185
P P P+Y + N P H H P + +++V G H QN R ++P +G
Sbjct: 13 PPPVPYYHNNYNNPPHHQIHPPPPPHHHIAAV-GFHKYPQNDNRDQRFNQPHYSG 66
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,492,955
Number of Sequences: 28952
Number of extensions: 270459
Number of successful extensions: 844
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 811731120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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