Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A19
         (513 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_11516| Best HMM Match : Lectin_C (HMM E-Value=2.9)                  29   2.2  
SB_42093| Best HMM Match : RVT_1 (HMM E-Value=2.5e-20)                 29   3.0  
SB_40417| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7)                      29   3.0  
SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1)                  29   3.0  
SB_28572| Best HMM Match : RVT_1 (HMM E-Value=2e-20)                   29   3.0  
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_21287| Best HMM Match : Lectin_C (HMM E-Value=3.1)                  29   3.0  
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)                 29   3.0  
SB_50382| Best HMM Match : RVT_1 (HMM E-Value=0.026)                   29   3.0  
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   3.0  
SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4)                    28   3.9  
SB_39639| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_18135| Best HMM Match : Cytochrom_B561 (HMM E-Value=0.5)            27   6.9  

>SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 592 WNPYTQCNIKKIEMIQRRAARFVFNDYSRYSSV 624


>SB_11516| Best HMM Match : Lectin_C (HMM E-Value=2.9)
          Length = 267

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 220 WNPYTQCNIKKIEMIQRRAARFVFNDYSRYSSV 252


>SB_42093| Best HMM Match : RVT_1 (HMM E-Value=2.5e-20)
          Length = 325

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 278 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 310


>SB_40417| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 681

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 278 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 310


>SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7)
          Length = 537

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 242 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 274


>SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1)
          Length = 311

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 194 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 226


>SB_28572| Best HMM Match : RVT_1 (HMM E-Value=2e-20)
          Length = 388

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 278 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 310


>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1360

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 834 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 866


>SB_21287| Best HMM Match : Lectin_C (HMM E-Value=3.1)
          Length = 179

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 132 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 164


>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
          Length = 769

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 722 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 754


>SB_50382| Best HMM Match : RVT_1 (HMM E-Value=0.026)
          Length = 1036

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493  WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
            W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 902  WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 934


>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 801

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 493 WQPYENYRIVCV*YVHRRSVIIVFNIYF*YSSI 395
           W PY    I  +  + RR+   VFN Y  YSS+
Sbjct: 692 WNPYTQCNINKIEMIQRRAARFVFNDYSRYSSV 724


>SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4)
          Length = 368

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 194 GLYSIGLPVSPLNGKVVIFFYIIG 265
           G+Y +G P S LNG V  +F+  G
Sbjct: 342 GVYGVGSPYSRLNGTVTCYFHTRG 365


>SB_39639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 154

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 193 GFHLEIKFTLEKNICTFHDKNSTAF 119
           GF L+I  T ++ +  FHD N+ +F
Sbjct: 76  GFELDIYLTKDEELVCFHDDNTKSF 100


>SB_18135| Best HMM Match : Cytochrom_B561 (HMM E-Value=0.5)
          Length = 1595

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 94   AAAVILRQRMLLNFCHEMYKCFFLK*TLFLSEIRSVFYRFTC 219
            + A +L + +LLN CH +Y+   +  TLF +++ S +    C
Sbjct: 954  STAQLLSRYLLLNCCHAIYRTIAV--TLFSAQLLSRYLPLNC 993


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,619,023
Number of Sequences: 59808
Number of extensions: 205375
Number of successful extensions: 306
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)