Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A18
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   0.77 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.5  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = +1

Query: 142 YSGTSRGSAASRCLGSCSIL---PGCRRRFI 225
           Y GTS      R LG C IL   PG  + F+
Sbjct: 270 YGGTSTNHQRGRILGGCHILVATPGRLKDFV 300


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 80   VSDRKKVITEWVKVSKTTGL 139
            +  +KK  TEW++VS    L
Sbjct: 1526 IEHKKKTSTEWIQVSNNVKL 1545


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 11  FLADNGIKSVLVGGTTGE 64
           ++ D   + V +GGTTG+
Sbjct: 157 WMLDPSAEDVFIGGTTGK 174


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 212 LHPGSMLQDPRHRLAALPLLVPEYVVP 132
           L PG    +  + +  L +L+P +++P
Sbjct: 111 LRPGKRFDEYIYGIIFLSILIPHFLLP 137


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 117 LTHSVITFFLSDTASDICS 61
           +T+    F+LS  ASD+C+
Sbjct: 200 VTYVFDLFYLSKRASDLCN 218


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 212 LHPGSMLQDPRHRLAALPLLVPEYVVP 132
           L PG    +  + +  L +L+P +++P
Sbjct: 111 LRPGKRFDEYIYGIIFLSILIPHFLLP 137


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -3

Query: 411 LKFDIRAVASFTK 373
           L+FD++ V+++TK
Sbjct: 473 LEFDVKCVSNYTK 485


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 552 SPILDLMPRSAAGANSVSAPRNISWP 475
           SP+L+L       A S+    NIS P
Sbjct: 211 SPVLNLSKSGGGSAGSLEDDDNISDP 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,835
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)