Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A15
(460 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 30 0.65
At5g28930.1 68418.m03578 hypothetical protein various predicted ... 29 1.1
At4g04700.1 68417.m00690 calcium-dependent protein kinase, putat... 29 2.0
At3g26230.1 68416.m03272 cytochrome P450 family protein contains... 29 2.0
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 28 2.6
At4g33230.1 68417.m04730 pectinesterase family protein contains ... 27 6.1
At4g05470.1 68417.m00829 F-box family protein (FBL21) contains s... 27 6.1
At2g40910.2 68415.m05048 F-box protein-related similar to F-box... 27 6.1
At2g40910.1 68415.m05049 F-box protein-related similar to F-box... 27 6.1
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 27 6.1
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 27 8.1
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 27 8.1
At1g48090.2 68414.m05363 C2 domain-containing protein contains P... 27 8.1
At1g48090.1 68414.m05362 C2 domain-containing protein contains P... 27 8.1
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 30.3 bits (65), Expect = 0.65
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 163 MQLYNSVIVSDYKAAVKTTFQLEKECRSDVISSVVNKLLLEGQPNVVEYAYSLWYRSGED 342
+QLYNS + D A +T + EKE R+ +I ++ N L+GQ + ++ + S ED
Sbjct: 208 LQLYNSKLQGDLDEAHETIKRGEKE-RTAIIENIGN---LKGQFSALQEQLAASKASQED 263
Query: 343 IVK 351
I+K
Sbjct: 264 IMK 266
>At5g28930.1 68418.m03578 hypothetical protein various predicted
proteins, Arabidopsis thaliana
Length = 509
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 154 DPVMQLYNSVIVSDYKAAVKTTFQLEKECRSDV 252
D V+ YNSV V D ++ T F EKE + DV
Sbjct: 286 DDVVSFYNSVDVPDGQSCGGTNFNNEKEFQGDV 318
>At4g04700.1 68417.m00690 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
contains protein kinase domain, Pfam:PF00069
Length = 485
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 199 KAAVKTTFQLEKECRSDVISSVVNKLLLEGQPNVVEYAYSLWYRSGEDIVKVY 357
K +KT + ++EC DV + L G+PN+VE+ + + IV Y
Sbjct: 57 KTILKTKLK-DEECEEDVKREIRIMKQLSGEPNIVEFKNAYEDKDSVHIVMEY 108
>At3g26230.1 68416.m03272 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 498
Score = 28.7 bits (61), Expect = 2.0
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 181 VIVSDYKAAVKTTFQLEKECRSDVISSVVNKLLLEGQP-NVVEYAYSLWYRSGEDIVKVY 357
V++S +AA + + EC + I++V +KL +GQ + Y SL +K +
Sbjct: 71 VVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFF 130
Query: 358 FPIE---FRLLFNEDPVLITNKRDELALK 435
+ FR + E+ L+ K E ALK
Sbjct: 131 STTKVRSFRYIREEENDLMVKKLKEAALK 159
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 384 KQQSKLYRKVNFDYVLTGSVPETVSVFDD 298
KQ K+YRK+ V G+VPE +V D
Sbjct: 655 KQIEKIYRKIALKLVREGAVPEEPAVASD 683
>At4g33230.1 68417.m04730 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 609
Score = 27.1 bits (57), Expect = 6.1
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 55 VLSALVTRVSLTPLCNNTAVSITSNDSPPFNNADPVMQLYNSVIV--SDYKAAVKTTFQL 228
++ L P C NT + T D+P DP L ++++ D K L
Sbjct: 94 IIQTLCNSTLYKPTCQNTLKNETKKDTP---QTDPRSLLKSAIVAVNDDLDQVFKRVLSL 150
Query: 229 EKECRSDVISSVVNKLLLE 285
+ E + D + KLL++
Sbjct: 151 KTENKDDKDAIAQCKLLVD 169
>At4g05470.1 68417.m00829 F-box family protein (FBL21) contains
similarity to N7 protein GI:3273101 from [Medicago
truncatula]
Length = 576
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 173 YNCITGSALLNGGESLEVIETAVLLHRGV 87
Y +T ++NG E L ++ET V+ H +
Sbjct: 143 YEPMTNKGVMNGIEKLPLLETLVIFHSSI 171
>At2g40910.2 68415.m05048 F-box protein-related similar to F-box
protein family, AtFBX9 (GI:20197985) [Arabidopsis
thaliana]; similar to F-box protein family, AtFBX8
(GI:20197464) [Arabidopsis thaliana]
Length = 442
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 435 LESKFITFIGN*HWIFVKQQSKLYRKVNFDYVLTGSVPETVSVF 304
+ S F T + + HW+FV + +RKV P TV F
Sbjct: 222 ISSAFFTNLKSEHWVFVLEAGGSWRKVRTLESYHPHAPSTVGQF 265
>At2g40910.1 68415.m05049 F-box protein-related similar to F-box
protein family, AtFBX9 (GI:20197985) [Arabidopsis
thaliana]; similar to F-box protein family, AtFBX8
(GI:20197464) [Arabidopsis thaliana]
Length = 449
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 435 LESKFITFIGN*HWIFVKQQSKLYRKVNFDYVLTGSVPETVSVF 304
+ S F T + + HW+FV + +RKV P TV F
Sbjct: 229 ISSAFFTNLKSEHWVFVLEAGGSWRKVRTLESYHPHAPSTVGQF 272
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 324 PETVSVFDDVWLSFEE*FIYDGADD 250
PET ++FDD+ L E IY+G D
Sbjct: 388 PETFNLFDDIILIAEGEIIYEGPRD 412
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 324 PETVSVFDDVWLSFEE*FIYDGADDVTSAF 235
PET +FDD+ L E IY G D +F
Sbjct: 354 PETFELFDDLILMGEGKIIYHGPRDFVCSF 383
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 324 PETVSVFDDVWLSFEE*FIYDGADD 250
PET +FDDV L E IY G D
Sbjct: 369 PETYELFDDVILMSEGQIIYQGPRD 393
>At1g48090.2 68414.m05363 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 3427
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 390 FVKQQSKLYRKVNF--DYVLTGSVPETVSVFDDVWLS 286
FV QQSK +V+ D TG+ P+T+ F W++
Sbjct: 3131 FVHQQSKRRLRVSIERDVGETGAAPKTIRFFVPYWIT 3167
>At1g48090.1 68414.m05362 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 4144
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 390 FVKQQSKLYRKVNF--DYVLTGSVPETVSVFDDVWLS 286
FV QQSK +V+ D TG+ P+T+ F W++
Sbjct: 3131 FVHQQSKRRLRVSIERDVGETGAAPKTIRFFVPYWIT 3167
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,191,505
Number of Sequences: 28952
Number of extensions: 144792
Number of successful extensions: 366
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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