Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A14
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.66 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   3.5  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    24   3.5  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   3.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   6.2  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   8.2  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -1

Query: 266  RGDGIAIRSAIRCGSRRSRAPTPAPSACERGLSTSPPSVRAPH 138
            R D I + +A+R       AP P P    RGL  SP +VRA H
Sbjct: 1098 REDSI-LMAAVRA-EEAGEAPPPIPMR-RRGLPPSPRTVRARH 1137


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +2

Query: 17  ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKE 196
           E +KLE +  +  +  +K      E+  KLE+++  L+    E++    ++   V  LK+
Sbjct: 818 ETLKLEIEELQKGIVTAK------EQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQ 871

Query: 197 QVLEH 211
           Q+ +H
Sbjct: 872 QIKQH 876


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 7   GLSRENQTRTQTTKESSRSVQMSTSQTRTYL*TRGQSEDFKRGECGARTDGGEVERPRSQ 186
           G  R +++R+++  +SSRS   S S++ +   +RG     +  +  +R+      R RS+
Sbjct: 401 GKKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSK-TRTSRSRSR 459

Query: 187 AEGAGVGARERRLPHR 234
                 G    RL  R
Sbjct: 460 TPLPARGHVRARLTRR 475


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = +2

Query: 464 SALGVDRTYNSASHNESFSFHCKLQILFFSY--QYCVVSLCLESEFCRN 604
           S LGVD    S  H    + HC +    FS     C +S   E E C +
Sbjct: 275 SMLGVDAIGMSTVHEIITARHCGMTCFAFSLITNMCTMSYEEEEEHCHD 323


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 512 SFSFHCKLQILFFSYQYCVVSLCLESE 592
           + + H  LQI+  SY Y  V   +ESE
Sbjct: 391 TLNLHTFLQIMKLSYSYLAVLQSMESE 417


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
 Frame = +2

Query: 5   MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKIL-------KGENAELAQMVV 163
           +DS+   K + +    ++ + K     L+R  KL D +K         K   AEL+Q V 
Sbjct: 417 LDSEINKKAQIEENYKKIESEK--NEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVG 474

Query: 164 KLKDHVHRLKEQV--LEHANGGCHIESH 241
             K+ +H L+ ++  +    G   I+ H
Sbjct: 475 TSKERIHELQSELDNVREQLGDAKIDKH 502


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 497 RYYTSCLHPERRFWCILPRLRCSLATDKLNEYI 399
           RYY + +    R+  +    + S A DK++EY+
Sbjct: 359 RYYMTLIDDHSRYTFVYFLKKKSEAEDKIHEYV 391


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,638
Number of Sequences: 2352
Number of extensions: 11947
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)