Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A14
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 44 9e-05
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 44 9e-05
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 44 9e-05
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 44 9e-05
Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 41 7e-04
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 41 7e-04
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 41 7e-04
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 41 7e-04
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 41 7e-04
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 41 7e-04
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 41 7e-04
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 41 7e-04
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 41 7e-04
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 37 0.011
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 36 0.018
AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical... 36 0.024
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 36 0.032
AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical... 32 0.40
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 31 0.70
U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical pr... 30 1.2
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 30 1.2
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 30 1.2
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 1.2
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 1.2
AC017117-7|AAF16620.3| 110|Caenorhabditis elegans Hypothetical ... 30 1.2
U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protei... 30 1.6
U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protei... 30 1.6
U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protei... 30 1.6
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.6
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 2.1
Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 29 2.1
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 29 2.1
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 29 2.1
AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical ... 29 2.1
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 29 2.1
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 29 2.1
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 29 2.1
AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 28 4.9
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 28 4.9
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 28 4.9
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 28 6.5
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 6.5
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 28 6.5
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 27 8.6
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 27 8.6
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 27 8.6
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 27 8.6
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 27 8.6
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVH 184
+D QE+ KLERKR RNR AA+KCR++K++RI +LE++V K L +++L +
Sbjct: 75 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELLELNRALE 134
Query: 185 RLKEQVLEHANGGC 226
+ V H+ GC
Sbjct: 135 HFRRTVEHHSGNGC 148
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVH 184
+D QE+ KLERKR RNR AA+KCR++K++RI +LE++V K L +++L +
Sbjct: 21 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELLELNRALE 80
Query: 185 RLKEQVLEHANGGC 226
+ V H+ GC
Sbjct: 81 HFRRTVEHHSGNGC 94
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVH 184
+D QE+ KLERKR RNR AA+KCR++K++RI +LE++V K L +++L +
Sbjct: 219 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELLELNRALE 278
Query: 185 RLKEQVLEHANGGC 226
+ V H+ GC
Sbjct: 279 HFRRTVEHHSGNGC 292
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVH 184
+D QE+ KLERKR RNR AA+KCR++K++RI +LE++V K L +++L +
Sbjct: 239 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELLELNRALE 298
Query: 185 RLKEQVLEHANGGC 226
+ V H+ GC
Sbjct: 299 HFRRTVEHHSGNGC 312
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 181
D D +R+K +RQRN+ AA++CR+R+++ + +L+D+V K N + +++ +
Sbjct: 24 DDDDDKRLK---RRQRNKEAAARCRQRRIDLMKELQDQVNDFKNSNDKKMAECNNIRNKL 80
Query: 182 HRLKEQVLEH 211
+ LK + H
Sbjct: 81 NSLKNYLETH 90
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 181
D D +R+K +RQRN+ AA++CR+R+++ + +L+D+V K N + +++ +
Sbjct: 160 DDDDDKRLK---RRQRNKEAAARCRQRRIDLMKELQDQVNDFKNSNDKKMAECNNIRNKL 216
Query: 182 HRLKEQVLEH 211
+ LK + H
Sbjct: 217 NSLKNYLETH 226
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 181
D D +R+K +RQRN+ AA++CR+R+++ + +L+D+V K N + +++ +
Sbjct: 24 DDDDDKRLK---RRQRNKEAAARCRQRRIDLMKELQDQVNDFKNSNDKKMAECNNIRNKL 80
Query: 182 HRLKEQVLEH 211
+ LK + H
Sbjct: 81 NSLKNYLETH 90
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 181
D D +R+K +RQRN+ AA++CR+R+++ + +L+D+V K N + +++ +
Sbjct: 160 DDDDDKRLK---RRQRNKEAAARCRQRRIDLMKELQDQVNDFKNSNDKKMAECNNIRNKL 216
Query: 182 HRLKEQVLEH 211
+ LK + H
Sbjct: 217 NSLKNYLETH 226
>Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical
protein W07G1.3 protein.
Length = 307
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHR 187
+S E I L RKR +N +AA++ R+R+ E E ++ L N EL V +++ + R
Sbjct: 240 ESPEEI-LRRKRIQNNLAAARYRKRQREARESAESELGDLTRRNDELRDQVSRMEREIDR 298
Query: 188 LKEQVL 205
LK+ VL
Sbjct: 299 LKQAVL 304
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 11 SQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRL 190
SQE K++R++ +NRVAA R +K ER +K+ED ++ L EN L +L+ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENERLRRQNKNL 117
Query: 191 KEQ 199
Q
Sbjct: 118 MNQ 120
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 11 SQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRL 190
SQE K++R++ +NRVAA R +K ER +K+ED ++ L EN L +L+ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENERLRRQNKNL 117
Query: 191 KEQ 199
Q
Sbjct: 118 MNQ 120
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 246 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 296
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 271 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 321
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 254 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 304
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 267 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 317
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 265 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 315
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 11 SQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRL 190
SQE K++R++ +NRVAA R +K ER +K+ED ++ L EN L +L+ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENERLRRQNKNL 117
Query: 191 KEQ 199
Q
Sbjct: 118 MNQ 120
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 11 SQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRL 190
SQE K++R++ +NRVAA R +K ER +K+ED ++ L EN L +L+ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENERLRRQNKNL 117
Query: 191 KEQ 199
Q
Sbjct: 118 MNQ 120
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 265 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 315
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 35 RKRQ----RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
RKRQ +NR AA +CRR+K E + LE++V +L+ +N L + + LK+
Sbjct: 246 RKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKE 296
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 38 KRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEHAN 217
+R+RN AA +CR + +V++L+GEN +L + LK + K + + A+
Sbjct: 335 RRRRNNEAAKRCRANRRAVFEYRSRRVQLLEGENEDLRTQIETLKAEIAHFKSVLAQRAS 394
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 38 KRQRNRVAASKCRRRKLERISKLEDKVKILKGENAEL 148
+R+RN A+ + R ++ + +E+K+ +L EN L
Sbjct: 60 RRRRNNDASRRSREKRRQNDLAMEEKIMLLSAENERL 96
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 SQER-IKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKL 169
++ER +K R++ RN+ +A R+RK + I +LED+V EN L Q + +L
Sbjct: 280 AEERDLKRIRRKIRNKRSAQTSRKRKQDYIEQLEDRVSESTKENQALKQQIERL 333
>AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical
protein Y111B2A.4 protein.
Length = 459
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 181
D+ S + + ER RQ V +CR K+E + +++ LK +N ELA +L +
Sbjct: 255 DLGSHDELVDERIRQME-VELQRCRDEKMECQHNSDAQIEDLKTQNKELANAYTELNEEF 313
Query: 182 HRLKEQ 199
KEQ
Sbjct: 314 EGFKEQ 319
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVV 163
DS + KL+ + +RN++ K ++ ++ + K ED+++ LK E E M++
Sbjct: 471 DSTFKKKLQEQSERNKIELEKKKQERMNKKRKFEDEIRKLKNELIERFNMIM 522
>AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical
protein W08E12.1 protein.
Length = 228
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 29 LERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVL 205
L RKRQ+N+VAA++ R ++ + L D+++ + N L L+ V +++ L
Sbjct: 164 LSRKRQQNKVAAARYRDKQKAKWQDLLDQLEAEEDRNQRLKLQAGHLEKEVAEMRQAFL 222
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +2
Query: 32 ERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEH 211
E+KR RN AA +CR + + LE ++ L N + Q ++L V +
Sbjct: 112 EKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLENI 171
Query: 212 ANGGCHIESHF*SRCRRLSSTF 277
+ +E+ +++ T+
Sbjct: 172 KSRNPELEAEIRYEAKKIVDTY 193
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 26 KLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVL 205
K ERK+ +NR+AA++ R +K + ++ L N +L V +L+ + K+ +
Sbjct: 140 KKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQVSELEREIRYFKKFMT 199
Query: 206 E 208
E
Sbjct: 200 E 200
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +2
Query: 32 ERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEH 211
E+KR RN AA +CR + + LE ++ L N + Q ++L V +
Sbjct: 112 EKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLENI 171
Query: 212 ANGGCHIESHF*SRCRRLSSTF 277
+ +E+ +++ T+
Sbjct: 172 KSRNPELEAEIRYEAKKIVDTY 193
>U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical
protein C06A8.5 protein.
Length = 479
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 101 KLEDKVKILKGENAELAQMVVKLKDHVHRLKEQV 202
K+E+ +K+L GEN L MV +L+ V ++E++
Sbjct: 208 KVEEDLKVLHGENRALKGMVKRLRMEVEEVEERL 241
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKL 169
+ +ER + ER+ Q R+AA K R+R+ E ++ ++ + A AQ +L
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAEL 653
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKL 169
+ +ER + ER+ Q R+AA K R+R+ E ++ ++ + A AQ +L
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAEL 653
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKL 169
+ +ER + ER+ Q R+AA K R+R+ E ++ ++ + A AQ +L
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAEL 653
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKL 169
+ +ER + ER+ Q R+AA K R+R+ E ++ ++ + A AQ +L
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAEL 653
>AC017117-7|AAF16620.3| 110|Caenorhabditis elegans Hypothetical
protein F43C11.10 protein.
Length = 110
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 38 KRQRNRVAASKCRRR--KLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEH 211
+RQ++ + RR + + + + K + + ++ L QMV++LKD V +L++++ E
Sbjct: 36 QRQKSEFTEEEYTRRLASVSLVREFKTKTQKKESKSFNLEQMVLELKDKVEKLEKRIKEL 95
Query: 212 ANGG 223
G
Sbjct: 96 EEAG 99
>U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protein
1, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 14 QERIKLERKRQRNRVAASKCRRRKLERISKL 106
++ I+ R+R +N+VAA CR+R+ +R K+
Sbjct: 276 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKM 306
>U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protein
1, isoform c protein.
Length = 533
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 14 QERIKLERKRQRNRVAASKCRRRKLERISKL 106
++ I+ R+R +N+VAA CR+R+ +R K+
Sbjct: 499 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKM 529
>U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protein
1, isoform a protein.
Length = 623
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 14 QERIKLERKRQRNRVAASKCRRRKLERISKL 106
++ I+ R+R +N+VAA CR+R+ +R K+
Sbjct: 589 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKM 619
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 26 KLERKRQRNRVAASKCRRRKLERISKLE 109
K + KR+RNR+AA+K RR + E + K +
Sbjct: 133 KAKTKRERNRIAAAKSRRLEKELMRKTQ 160
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 14 QERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 175
QE+ + ++K + A K RR LER + E + K L+ E E Q K K+
Sbjct: 327 QEKQEEKQKNEDRERATQKERREHLERHRQAEARAKALEKEKHERLQQEAKDKE 380
>Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKV-KILKGENAEL 148
M E I+L RKR R+ + +R+KL R + ++ K L+G A+L
Sbjct: 1 MPQNEHIELHRKRHGRRLDHEERQRKKLARAAHDRSQMAKTLRGHKAKL 49
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 496 AIIRPVYTQSGGSGASCRDSGAHWLPTNLTNTST 395
A I P+ G+ CRDSG ++PTNL ++T
Sbjct: 257 AEICPLPCTCTGTTVDCRDSGLTYVPTNLPPSTT 290
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKL----ERISKLEDKVKILKGENAELAQMVVKLKD 175
+ +ER+K ER++ + K K+ E++ E+KVK+ K N E K+K
Sbjct: 911 EEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKE------KVKA 964
Query: 176 HVHRLKEQ 199
RLK +
Sbjct: 965 EEERLKAE 972
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 17 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILK 130
E+ KLERK+++NR A C + + +L+ +++L+
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 299
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 17 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILK 130
E+ KLERK+++NR A C + + +L+ +++L+
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 316
>AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKV-KILKGENAEL 148
M E I+L RKR R+ + +R+KL R + ++ K L+G A+L
Sbjct: 1 MPQNEHIELHRKRHGRRLDHEERQRKKLARAAHDRSQMAKTLRGHKAKL 49
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 496 AIIRPVYTQSGGSGASCRDSGAHWLPTNLTNTST 395
A I P+ G+ CRDSG ++PTNL ++T
Sbjct: 257 AEICPLPCTCTGTTVDCRDSGLTYVPTNLPPSTT 290
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 17 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILK 130
E+ KLERK+++NR A C + + +L+ +++L+
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 316
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 17 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILK 130
E+ KLERK+++NR A C + + +L+ +++L+
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 299
>AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical
protein Y71F9AL.9 protein.
Length = 314
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = -1
Query: 281 LGMWRRGDGIAIRSAIRCGSRRSRAPTPAP----SACERGLSTSPPSVRAP-HSPLLKSS 117
LG W DG+++ +A + ++ + T AP SA + P+V AP S + KS+
Sbjct: 57 LGGWTTSDGVSVTAAKKKKNKSKKTETAAPETTQSAPAPAKAAPAPTVAAPASSSVTKSA 116
Query: 116 LCP 108
P
Sbjct: 117 AAP 119
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAE 145
+D +E +KLE++ + + SK ++ KLE + E++ +I + E +
Sbjct: 498 IDLEETLKLEKRIEEVSIEESKKKQEKLELKQREEEEARIKEEEEKQ 544
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQ 154
+ D +E+ KLE+K++ K K +++ + E+K+K + + A A+
Sbjct: 206 EKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAE 256
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQ 154
+ D +E+ KLE+K++ K K +++ + E+K+K + + A A+
Sbjct: 242 EKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAE 292
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 2 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQ 154
+ D +E+ KLE+K++ K K +++ + E+K+K + + A A+
Sbjct: 242 EKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAE 292
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 8 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHR 187
+ Q+RI+LER+ + R+ + RR + ER K E++ K+ + E + + HR
Sbjct: 281 EEQQRIELERREEERRLESE--RRAEEER--KREEEAKLQEQRRREQEDEHKRRMEEYHR 336
Query: 188 LKEQ 199
+++
Sbjct: 337 REQE 340
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 14 QERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQM 157
QER+ +ER R+ R+ + ++R+ ER+ + E ++I K E Q+
Sbjct: 363 QERMAMERNRELERIRLEE-KKRENERVRQEEIAMEISKIRELERLQL 409
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 13 SRENQTRTQTTKESSRSVQMSTSQTRTYL*TRGQSEDFKRGECGARTDGGEVERPRSQAE 192
SRE + + ++ R + ++ +T T L ++ D+KR C T+ ER + QAE
Sbjct: 66 SRECRLSKEAHRKRLRRARETSEETHTRL---AKAADYKRKRCSEETEEEYRERLKRQAE 122
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 221 RRSRAPTPAPSACERGLSTSPPSVRAPHSPL 129
RR R+P+P R S SPP+ R SP+
Sbjct: 490 RRRRSPSPERQRKRRSPSDSPPTRRLSTSPI 520
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 221 RRSRAPTPAPSACERGLSTSPPSVRAPHSPL 129
RR R+P+P R S SPP+ R SP+
Sbjct: 490 RRRRSPSPERQRKRRSPSDSPPTRRLSTSPI 520
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 68 KCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQ 199
K ++ + ER+ KLE+K+K K + AE + ++ K R+K++
Sbjct: 960 KAKKEEAERLKKLEEKLKKEKEKQAEKDR--IEAKKFEERMKKE 1001
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/70 (20%), Positives = 38/70 (54%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVH 184
+ Q+RI+LE+++ ++A + R+R+ + + + +K + L+ + + V+ ++
Sbjct: 413 LQEQQRIQLEQEQYLLQLAEDERRKREQKEMKEKAEKERQLRAREEQEHFLAVQREEQAQ 472
Query: 185 RLKEQVLEHA 214
K++ E A
Sbjct: 473 LEKQREREEA 482
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/70 (20%), Positives = 38/70 (54%)
Frame = +2
Query: 5 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVH 184
+ Q+RI+LE+++ ++A + R+R+ + + + +K + L+ + + V+ ++
Sbjct: 413 LQEQQRIQLEQEQYLLQLAEDERRKREQKEMKEKAEKERQLRAREEQEHFLAVQREEQAQ 472
Query: 185 RLKEQVLEHA 214
K++ E A
Sbjct: 473 LEKQREREEA 482
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,338,297
Number of Sequences: 27780
Number of extensions: 271732
Number of successful extensions: 1239
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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