Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A13
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 142 2e-34
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 140 1e-33
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 140 1e-33
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 138 4e-33
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 138 4e-33
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 138 4e-33
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 138 4e-33
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 126 1e-29
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 4.9
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 4.9
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 142 bits (343), Expect = 2e-34
Identities = 65/148 (43%), Positives = 90/148 (60%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 270
+A A + + G I F + + + GS+ GL G +GFH+HEKGD GC S G H+
Sbjct: 30 KAEAGKIPTELIGTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHY 88
Query: 271 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 450
NP HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+ D
Sbjct: 89 NPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTD 148
Query: 451 DFGRTDHPDSRKTGNAGGRVACGVIGIL 534
D GR S+ TGNAG R+ACG IGI+
Sbjct: 149 DLGRGTSDQSKTTGNAGSRLACGTIGIV 176
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 140 bits (338), Expect = 1e-33
Identities = 64/146 (43%), Positives = 88/146 (60%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 270
+A A + + G I F + + + GS+ GL G +GFH+HEKGD GC S G H+
Sbjct: 30 KAEAGKIPTELIGTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHY 88
Query: 271 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 450
NP HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+ D
Sbjct: 89 NPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTD 148
Query: 451 DFGRTDHPDSRKTGNAGGRVACGVIG 528
D GR S+ TGNAG R+ACG IG
Sbjct: 149 DLGRGTSDQSKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 140 bits (338), Expect = 1e-33
Identities = 64/146 (43%), Positives = 88/146 (60%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 270
+A A + + G I F + + + GS+ GL G +GFH+HEKGD GC S G H+
Sbjct: 30 KAEAGKIPTELIGTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHY 88
Query: 271 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 450
NP HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+ D
Sbjct: 89 NPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTD 148
Query: 451 DFGRTDHPDSRKTGNAGGRVACGVIG 528
D GR S+ TGNAG R+ACG IG
Sbjct: 149 DLGRGTSDQSKTTGNAGSRLACGTIG 174
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 138 bits (333), Expect = 4e-33
Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 267
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 4 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 63
Query: 268 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 447
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 448 DDFGR---TDHPDSRKTGNAGGRVACGVIGI 531
DD G +S+KTGNAG R ACGVI +
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAACGVIAL 154
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 138 bits (333), Expect = 4e-33
Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 267
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 4 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 63
Query: 268 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 447
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 448 DDFGR---TDHPDSRKTGNAGGRVACGVIGI 531
DD G +S+KTGNAG R ACGVI +
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAACGVIAL 154
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 138 bits (333), Expect = 4e-33
Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 267
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 4 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 63
Query: 268 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 447
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 448 DDFGR---TDHPDSRKTGNAGGRVACGVIGI 531
DD G +S+KTGNAG R ACGVI +
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAACGVIAL 154
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 138 bits (333), Expect = 4e-33
Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 267
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 26 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 85
Query: 268 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 447
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 86 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 145
Query: 448 DDFGR---TDHPDSRKTGNAGGRVACGVIGI 531
DD G +S+KTGNAG R ACGVI +
Sbjct: 146 DDLGEGVGDKAEESKKTGNAGARAACGVIAL 176
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 126 bits (305), Expect = 1e-29
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Frame = +1
Query: 91 RAIAHLVGENIRGNITFTRLPDGK-VHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 267
RA+A L G + G + T+ +G+ EG I GL PG +GFH+H+ GD + GC S G H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 268 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 447
FNP HG RHVGDLGN E + +KI D +++ GA+ ++GR++V+H
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDR 143
Query: 448 DDFGR---TDHPDSRKTGNAGGRVACGVIGI 531
DD G+ +S KTGNAG R ACGVI +
Sbjct: 144 DDLGQGIDDKAEESLKTGNAGARAACGVIAL 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 88 TRAIAHLV---GENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGST 258
T A+A L+ G +I G TF++L + + G + LP G + +H+ GD S GC
Sbjct: 882 TIAVAILITREGAHI-GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRV 940
Query: 259 GSHFN 273
G+ F+
Sbjct: 941 GAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 88 TRAIAHLV---GENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGST 258
T A+A L+ G +I G TF++L + + G + LP G + +H+ GD S GC
Sbjct: 673 TIAVAILITREGAHI-GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRV 731
Query: 259 GSHFN 273
G+ F+
Sbjct: 732 GAPFS 736
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 382 GRSYQSCWSSSCQIPRYQDP 323
GR Y+SCW + +P Y+ P
Sbjct: 349 GRRYKSCWHNELGLPIYEGP 368
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 382 GRSYQSCWSSSCQIPRYQDP 323
GR Y+SCW + +P Y+ P
Sbjct: 349 GRRYKSCWHNELGLPIYEGP 368
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,547,353
Number of Sequences: 27780
Number of extensions: 295722
Number of successful extensions: 790
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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