Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A06
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    29   0.046
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   0.98 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.1  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 0.046
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 279 ATMGRHHSHVQAPPPPPATLSCLVAMVCAL 190
           A+   HH H+QA PP  +     VA  C L
Sbjct: 49  ASSQHHHHHLQARPPQDSPYDASVAAACKL 78


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 85  GVKLSKSSRWREDRTRSSPRRVPA 14
           G++ S SSR  +  T+S PR  PA
Sbjct: 240 GLQSSGSSRSHQPATKSKPRPAPA 263


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 43  TRSSPRRVPAGARC 2
           TR +PR  PA +RC
Sbjct: 289 TRGTPRTTPASSRC 302


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/59 (20%), Positives = 21/59 (35%)
 Frame = -2

Query: 429  PETGPNTIAFPITTNPKXXXXXXXXXXXXXCTGRTDATPSPTSSAVATNSATMGRHHSH 253
            P   P+T ++   T P               T  T   P+ T S +  +    G+++ H
Sbjct: 1157 PGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPH 1215



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -2

Query: 336  TGRTDATPSPTSSAVATNSATMGRHHSHVQAPPP 235
            T R   T  PT+++  T   T          PPP
Sbjct: 1056 TTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPP 1089


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 76  LSKSSRWREDRTRSSP 29
           +SK + WR  RT+ SP
Sbjct: 117 ISKDAVWRNLRTKLSP 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,183
Number of Sequences: 336
Number of extensions: 2230
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)