Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_A06
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 33 0.17
At5g38560.1 68418.m04662 protein kinase family protein contains ... 30 1.2
At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family... 30 1.6
At1g76040.2 68414.m08829 calcium-dependent protein kinase, putat... 30 1.6
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 30 1.6
At5g10800.1 68418.m01255 RNA recognition motif (RRM)-containing ... 29 2.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 25 2.5
At1g07310.1 68414.m00778 C2 domain-containing protein contains s... 29 2.8
At5g47430.1 68418.m05844 expressed protein 28 4.9
At3g51650.1 68416.m05664 expressed protein 28 4.9
At3g51640.1 68416.m05663 expressed protein 28 4.9
At2g28500.1 68415.m03463 LOB domain protein 11 / lateral organ b... 28 4.9
At1g64050.1 68414.m07255 expressed protein 28 4.9
At5g40730.1 68418.m04943 arabinogalactan-protein (AGP24) 28 6.5
At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 28 6.5
At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 28 6.5
At5g37010.1 68418.m04438 expressed protein 27 8.5
At4g18910.1 68417.m02788 aquaglyceroporin / NOD26-like major int... 27 8.5
At3g22270.1 68416.m02815 expressed protein 27 8.5
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/59 (27%), Positives = 20/59 (33%)
Frame = -2
Query: 405 AFPITTNPKXXXXXXXXXXXXXCTGRTDATPSPTSSAVATNSATMGRHHSHVQAPPPPP 229
+ P+TTN +G P P + T G HH PPPPP
Sbjct: 67 SIPVTTNTGHRHCRPPSNPATTNSGHHQLRPPPPPPPPLSAITTTGHHHHRRSPPPPPP 125
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 315 PSPTSSAVATNSATMGRHHSHVQAPPPPP 229
P PT + T + T G HH H ++PPPPP
Sbjct: 129 PPPTITPPVTTT-TAGHHH-HRRSPPPPP 155
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 315 PSPTSSAVATNSATMGRHHSHVQAPPPPPAT 223
P PT + T + T HH H + PPPPPAT
Sbjct: 160 PPPTITPPVTTTTT--GHHHH-RPPPPPPAT 187
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 288 TNSATMGRHHSHVQAPPPPPATLSCL 211
+N AT H ++ PPPPP LS +
Sbjct: 83 SNPATTNSGHHQLRPPPPPPPPLSAI 108
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = -2
Query: 429 PETGPNTIAFPITTNPKXXXXXXXXXXXXXCTGRTDATPSPTSSAVATNSATMGRHHSHV 250
P+ P+ A P TTNP G T + P P+ S + T
Sbjct: 119 PDASPSPPA-PTTTNPPPKPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTT-------- 169
Query: 249 QAPPPPPAT 223
+PPPPPAT
Sbjct: 170 -SPPPPPAT 177
>At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 310
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 321 ATPSPTSSAVATNSATMGRHHSHVQAPPPPP 229
ATPSPTSS + ++ H + PP PP
Sbjct: 2 ATPSPTSSPPSDSNPNSAATPPHQKQPPSPP 32
>At1g76040.2 68414.m08829 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GB:AAC25423 GI:3283996 [Nicotiana tabacum]
Length = 534
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 315 PSPTSSAVATNSATMGRHHSHVQAPPPPPATLS 217
P PT S T++ T APPPPP+T S
Sbjct: 34 PKPTVSQGQTSNPTSNPQPKPKPAPPPPPSTSS 66
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = -1
Query: 658 DQHPGERGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRPEPKQCACRLRHYVPERCEDRQ 479
D H R D RS RD RHR R RS++R + + H R R
Sbjct: 125 DHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEH-RHKSEHRSRSRSRSRS 183
Query: 478 PAQR 467
++R
Sbjct: 184 KSKR 187
>At5g10800.1 68418.m01255 RNA recognition motif (RRM)-containing
protein KIAA0332 gene, Homo sapiens, EMBL:HSAB2330
Length = 947
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -1
Query: 643 ERGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRPEPKQCACRLRHY--VPERCEDRQPAQ 470
+R L R R D+R R + RSQ P+ R+R + +R DR Q
Sbjct: 851 QRVLPEKREKREDSRDSSRKRNRSESQNRSQSPPQKSLTRERVRDHDLDKDRHRDRDRQQ 910
Query: 469 RDC-RQCHRGVHVRTRDGAEHDR 404
D + R +R+ +HDR
Sbjct: 911 HDLDKDRKRRAKSSSRERDDHDR 933
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 327 TDATPSPTSSAVATNSATMGRHHSHVQAPPPPP 229
T + P PT A + + VQ+PPPPP
Sbjct: 604 TSSPPPPTYYATQSPPPPPPPTYYAVQSPPPPP 636
Score = 22.2 bits (45), Expect(2) = 2.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 252 VQAPPPPPATLS 217
+Q+PPPPP S
Sbjct: 658 IQSPPPPPVYYS 669
>At1g07310.1 68414.m00778 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 352
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 315 PSPTSSAVATNSATMGRHHSHVQAPPPPP 229
P P S + SA G H+ PPPPP
Sbjct: 148 PRPQSQPLDYYSAPQGNHYYSPSPPPPPP 176
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -1
Query: 499 ERCEDRQPAQRDC-RQCHRGV---HVRTRDGAEHDRVSDH 392
ER D + QRD R H+ V H RTRD + DR DH
Sbjct: 695 ERYPDERDRQRDRERSRHQDVDREHDRTRDRRDEDRSRDH 734
>At3g51650.1 68416.m05664 expressed protein
Length = 826
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 511 HYVPERCEDRQPAQRDCRQCHRGVHVRTRDGAEHDRVS 398
H+ P+ + ++ DC Q H+G + + +D EHD+ S
Sbjct: 691 HHAPQHRTESLFSKEDC-QLHQGAYSQRKDYLEHDQRS 727
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 511 HYVPERCEDRQPAQRDCRQCHRGVHVRTRDGAEHDRVS 398
H+ P+ + ++ DC Q H+G + + +D EHD+ S
Sbjct: 691 HHAPQHRTESLFSKEDC-QLHQGAYSQRKDYLEHDQRS 727
>At2g28500.1 68415.m03463 LOB domain protein 11 / lateral organ
boundaries domain protein 11 (LBD11) identical to
SP|Q9SK08 LOB domain protein 11 {Arabidopsis thaliana}
Length = 229
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 321 ATPSPTSSAVATNSATMGRHHSHVQAPPPPPA 226
ATP+ ++ A T + T S +PPPPP+
Sbjct: 8 ATPTASAVAKVTETTTPVNSPSPTSSPPPPPS 39
>At1g64050.1 68414.m07255 expressed protein
Length = 668
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 321 ATPSPTSSAVATNSATMGRHHSHVQAPPPPP 229
++ SP S +S++ ++HS + PPPPP
Sbjct: 620 SSSSPIESDRKHSSSSKFKNHSRMMLPPPPP 650
>At5g40730.1 68418.m04943 arabinogalactan-protein (AGP24)
Length = 69
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 300 SAVATNSATMGRHHSHVQAPPPPPATLSCLVA 205
+ +A SA G HH H AP P PA+ S +V+
Sbjct: 18 ATMAVVSAHEGHHH-HAPAPAPGPASSSTVVS 48
>At2g27810.2 68415.m03372 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 660
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 333 GRTDATPSPTSSAVATNSATMGRHHSHVQAPPPPPATLS 217
G+T P P SA TN T + PPPPP +++
Sbjct: 71 GQTRLRPPPPVSAAVTNGET--DKDKKEKPPPPPPGSVA 107
>At2g27810.1 68415.m03371 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 709
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 333 GRTDATPSPTSSAVATNSATMGRHHSHVQAPPPPPATLS 217
G+T P P SA TN T + PPPPP +++
Sbjct: 71 GQTRLRPPPPVSAAVTNGET--DKDKKEKPPPPPPGSVA 107
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 670 RSRRDQHPGERGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRP 542
R RR + P R D +SNR +R R + G GGG R + P
Sbjct: 178 RERRRRTPS-RERDDSKSNRSGSRER-GSSGNGGGSRRVSRSP 218
>At4g18910.1 68417.m02788 aquaglyceroporin / NOD26-like major
intrinsic protein 2 (NLM2) contains Pfam profile: MIP
PF00230; similar to SP:P08995 {Glycine max} Nodulin-26
(N-26); identical to cDNA aquaglyceroporin (nlm2 gene)
GI:11071655, aquaglyceroporin [Arabidopsis thaliana]
GI:11071656
Length = 294
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 383 GFVVIGNAIVFGPVSGAHMN 442
G V+ N I+ GPVSGA MN
Sbjct: 211 GSTVLLNVIIAGPVSGASMN 230
>At3g22270.1 68416.m02815 expressed protein
Length = 782
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 517 LRHYVPERCEDRQPAQRDCRQCHRGVHV 434
+ H+ P + +D QP R+ + H VHV
Sbjct: 414 ISHFYPAQLKDHQPRSRNSSEQHPQVHV 441
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,414,430
Number of Sequences: 28952
Number of extensions: 222959
Number of successful extensions: 1352
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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