Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A05
         (562 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)             114   5e-26
SB_26408| Best HMM Match : Lipase (HMM E-Value=0)                      99   2e-21
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)            92   2e-19
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)                  72   3e-13
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)               46   2e-05
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)                  42   5e-04
SB_2436| Best HMM Match : Orn_DAP_Arg_deC (HMM E-Value=6.9)            30   1.1  
SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)           29   2.0  
SB_52448| Best HMM Match : X (HMM E-Value=1.7)                         29   2.6  
SB_31156| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  

>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 940

 Score =  114 bits (274), Expect = 5e-26
 Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 9/170 (5%)
 Frame = +3

Query: 9    YLHSTTYVRFIGEKLGEVLAAMA-KGGMSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQV 185
            Y  +T   R +G ++ E++  +  + G +P + +L+G SLG+HISG+ G+     TG ++
Sbjct: 657  YEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGFSLGAHISGYVGRRIAK-TGQKL 715

Query: 186  GRISGLDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEPCGHADYYPNSGSQQP 365
             RI+GLDPA   F N   ++RL  +DA +VDV+HTD  + G     GH D+YPN G +QP
Sbjct: 716  NRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTDMDLAGTPTVSGHIDFYPNGGKKQP 775

Query: 366  NCL--------FQTCSHSRAVLLYGESIGNVNAFPAVRCKDWESFRIGQC 491
             C         +  C H RA   Y ES+       A  C   + F  G C
Sbjct: 776  GCRDLLDGPINYVICDHMRAPEYYAESVTTTCPMLAFPCTSMDDFERGYC 825


>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
          Length = 714

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
 Frame = +3

Query: 9   YLHSTTYVRFIGEKLGEVLAAMA-KGGMSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQV 185
           +  +    R +G +   +L  +  + G     +H+IG S G+H++G+ G+      G  +
Sbjct: 159 FTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRRMKK-RGRMI 217

Query: 186 GRISGLDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEPCGHADYYPNSGSQQP 365
            RI+ LDPA   F     ++RL  +DA +VDVIHT    YG+    GHAD+YPN G +QP
Sbjct: 218 DRITALDPAAMWFHKHHEDVRLDTSDALFVDVIHTSAD-YGITSTIGHADFYPNGGKKQP 276

Query: 366 NC--------LFQTCSHSRAVLLYGESIGNVNAFPAVRCKDWESFRIGQC-DTDIKLMGY 518
            C         +  C H RA  L+  S+       +  C+  + F  G C   D K    
Sbjct: 277 GCDNFFRGFSSYLFCGHKRAPALFTTSLYTKTPLYSYPCRSEDDFNSGNCLKCDGKCPTM 336

Query: 519 GSTPDTR 539
           G   DT+
Sbjct: 337 GFRLDTK 343


>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
          Length = 291

 Score = 92.3 bits (219), Expect = 2e-19
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = +3

Query: 9   YLHSTTYVRFIGEKLGEVLAAMAK--GGMSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQ 182
           Y+ +    R +G ++   +  +    G     A H IG SLG+HISG+ G+    + G  
Sbjct: 140 YVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSIGFSLGAHISGYVGQRLKRI-GRH 198

Query: 183 VGRISGLDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEPCGHADYYPNSGSQQ 362
           + RI+GLDPA   F     ++RL   DA++VDVIHT   V+G+  P GH D+YPN G+ Q
Sbjct: 199 LDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHT-SYVFGITAPHGHMDFYPNGGTSQ 257

Query: 363 PNC 371
             C
Sbjct: 258 RGC 260


>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
          Length = 408

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 49/135 (36%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
 Frame = +3

Query: 201 LDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEPCGHADYYPNSGSQQPNCL-- 374
           LDPAG  F N   ++RL  +DA++VDV+HTD    G     GH D+YPN G  QP C   
Sbjct: 2   LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKNQPGCRDI 61

Query: 375 ------FQTCSHSRAVLLYGESIGNVNAFPAVRCKDWESFRIGQCDTDIKLM----GYG- 521
                    C H RA   + ESI +  A  A  C     F  G C   +  +    GY  
Sbjct: 62  ADGPSNALKCDHVRAHDYFTESITSQCAMRAFPCASMHDFERGLCFDCVNNLCPSAGYNA 121

Query: 522 --STPDTRGIYFLLT 560
             S    +G YFL T
Sbjct: 122 VKSKGKAKGKYFLYT 136


>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 67

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +3

Query: 84  GMSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQVGRISG 200
           G +P +  +IG SLG H++G+AG      TGL++GRISG
Sbjct: 13  GNTPSSFTVIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51


>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
          Length = 131

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 6   LYLHSTTYVRFIGEKLGEVLAAMAKG-GMSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQ 182
           LY  +    R +G +L E++  + +        +HLIGHSLG+H++G+AG+    L+G +
Sbjct: 70  LYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGE---RLSG-K 125

Query: 183 VGRIS 197
           VGRI+
Sbjct: 126 VGRIT 130


>SB_2436| Best HMM Match : Orn_DAP_Arg_deC (HMM E-Value=6.9)
          Length = 467

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 267 KYVDVIHTDGGVYGLKEPCGHADYYPNSGSQ 359
           +Y++  H+ GG  GL   CG A+   N G+Q
Sbjct: 295 EYIEATHSMGGAIGLSPKCGIANSRENLGAQ 325


>SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)
          Length = 360

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = +3

Query: 87  MSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQVGRISGLDPAGPCFSNIPAEL------- 245
           M+PD   L G  +G  +S    +  +TL       +  LDP+    ++I A L       
Sbjct: 145 MTPDLKTLSGDLIGQLLSATVNEKNSTLLTALSSNVKFLDPSKLNLNDIKASLSFKDGKV 204

Query: 246 RLKHTDAKYVDVIHTDGGVYGLKE 317
            LK  + KY D+    GG +G  +
Sbjct: 205 ALKPMNLKYQDINMVVGGTHGFDQ 228


>SB_52448| Best HMM Match : X (HMM E-Value=1.7)
          Length = 549

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = -1

Query: 280 TSTYLASVCLRRSSAGILLKQGPAGSSPDILPT*SPVSVVNVL 152
           +ST LASVC   S AG      P  S+   L T SP+S V +L
Sbjct: 50  SSTSLASVCSGLSLAGSTPLMTPLVSTLSTLATTSPLSAVPIL 92


>SB_31156| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 336 YYPNSGSQQPNC--LFQTCSHSRAVLLYGESIGN 431
           YYP S +   +C  LF+TC H  A L     IGN
Sbjct: 44  YYPCSSATMDSCFVLFRTCQHGIAGLPQLNFIGN 77


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,095,230
Number of Sequences: 59808
Number of extensions: 379618
Number of successful extensions: 997
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)