Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A02
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    27   0.23 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.8  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   5.0  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   5.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   5.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.0  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 242 NLCIHSSLGFCIKY*SARYHSN*IFEDPLRNECKKIYVN 126
           N  IH++  +   Y +  Y++N  + +   N CKK+Y N
Sbjct: 320 NKTIHNNNNYKYNYNNNNYNNN-NYNNNYNNNCKKLYYN 357


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/45 (20%), Positives = 22/45 (48%)
 Frame = +3

Query: 231 NTQVISNGINAMAVIFLSVISKLYVMCYQ*IHFITVCDENSRVFI 365
           ++Q ++  ++   V+F  ++S L + C+   HF      N  + +
Sbjct: 306 SSQSVAEVMDRNGVLFFGLLSDLAIGCWNSEHFFEYGGNNIEIIV 350


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 185 HSN*IFEDPLRNECKKIYVN 126
           H+N  ++    N CKK+Y N
Sbjct: 91  HNNNNYKYNYNNNCKKLYYN 110


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 464 GIDTNVIIVKYTDYMI 417
           GID + ++ KY +Y++
Sbjct: 19  GIDQDTVVAKYMEYLM 34


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 464 GIDTNVIIVKYTDYMI 417
           GID + ++ KY +Y++
Sbjct: 19  GIDQDTVVAKYMEYLM 34


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 228 MNTQVISNGINAMAVIFLSVISKLYVMCY 314
           +NTQ ++  ++   V+F+ ++    V C+
Sbjct: 300 LNTQSLAKAVSKNGVLFVGLVGNSAVGCW 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,121
Number of Sequences: 438
Number of extensions: 3726
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)