Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_A01
         (522 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DPM7 Cluster: Putative uncharacterized protein; n=1; ...    35   0.98 
UniRef50_UPI00006D0DCF Cluster: hypothetical protein TTHERM_0021...    33   3.0  
UniRef50_A0PYD6 Cluster: Lipoprotein, putative; n=2; Clostridium...    32   9.2  

>UniRef50_A2DPM7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1583

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 25/89 (28%), Positives = 45/89 (50%)
 Frame = -2

Query: 482 NIYAKKNYTYKNGTLVLINIKSRSEISELCIREYFLSFIFKREMNTIKLI*YFICKLIEK 303
           NIY KK Y      L+   I+  ++IS+    EYF +F+FK   NT   I Y    L+E+
Sbjct: 323 NIYLKKGYIAIKNKLIYKAIRLGNDISDSEKTEYFETFVFK---NTKDAIRYLHIGLVER 379

Query: 302 MVTVVEIKKLCDVTKD*NYGGMSIVKSMV 216
              +++   +  +    NY   +I+++++
Sbjct: 380 CDLLLDFSFIRYIVT--NYAEKTILEAVI 406


>UniRef50_UPI00006D0DCF Cluster: hypothetical protein TTHERM_00218390;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00218390 - Tetrahymena thermophila SB210
          Length = 5965

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 24/67 (35%), Positives = 37/67 (55%)
 Frame = -2

Query: 485  TNIYAKKNYTYKNGTLVLINIKSRSEISELCIREYFLSFIFKREMNTIKLI*YFICKLIE 306
            TN+  KK  TY N     +N+++  E S +   E  ++F +K   N I    Y +CKLIE
Sbjct: 899  TNL-RKKCITYTNQIERYLNVQNSEENSNMNAEED-INFNYK---NVICYQIYNVCKLIE 953

Query: 305  KMVTVVE 285
            K++T +E
Sbjct: 954  KLITGIE 960


>UniRef50_A0PYD6 Cluster: Lipoprotein, putative; n=2; Clostridium
           novyi NT|Rep: Lipoprotein, putative - Clostridium novyi
           (strain NT)
          Length = 412

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
 Frame = +3

Query: 21  KLGSCRSGRVTALVLAFMLVCSLAADERHRLY--NLFN-LYVSKTLFIKRRTIAK 176
           K+   RS +V+ +V+  ++ CS+ ++ +HRLY   + N ++  K + +KR  + K
Sbjct: 11  KIFKTRSTKVSLIVILLLMACSVVSNIKHRLYVDEMGNEIHGLKAIELKREQVTK 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,709,672
Number of Sequences: 1657284
Number of extensions: 8123140
Number of successful extensions: 16900
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16898
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)