Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P24
         (395 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu...    32   0.37 
UniRef50_Q1DRS5 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  
UniRef50_Q4DRY2 Cluster: Putative uncharacterized protein; n=2; ...    31   6.1  
UniRef50_A0XXC6 Cluster: Predicted secreted protein; n=2; Altero...    31   8.1  
UniRef50_A7EI98 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  
UniRef50_A6SAP8 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  

>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
           nubilalis|Rep: Reverse transcriptase - Ostrinia
           nubilalis (European corn borer)
          Length = 497

 Score = 31.9 bits (69), Expect(2) = 0.37
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -3

Query: 210 EIRRRTEVTEIARRIDKI 157
           EIRRRT VT+IARRI KI
Sbjct: 404 EIRRRTRVTDIARRIAKI 421



 Score = 31.1 bits (67), Expect = 8.1
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = -2

Query: 241 VSLRDRIRNERDPQKNRSDRDCQKN**NLSGISPTTLLAEPMPGCGQRVLEWLPRTRRPG 62
           VSLRDRIRNE   ++ R   D  +    +       +        G++VLEW PR  R  
Sbjct: 394 VSLRDRIRNEEIRRRTRVT-DIARRIAKIKWQWAGHIARRADGRWGRKVLEWRPRAGRRS 452

Query: 61  EGR 53
            GR
Sbjct: 453 VGR 455



 Score = 22.6 bits (46), Expect(2) = 0.37
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 327 ISMCDRIRSEEIR 289
           +S+ DRIR+EEIR
Sbjct: 394 VSLRDRIRNEEIR 406


>UniRef50_Q1DRS5 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 878

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = -3

Query: 246 Q*FHCVIESGMSEIRRRTEVTEIARRIDKI*VALARPHCSQNRCPDVANG-FSNGYHAPE 70
           Q  H  ++SG   + +R +  E+A+R+    + L R     +    +A+  F      P 
Sbjct: 524 QVLHLHLKSGSQHLEKRVD-RELAKRLWHSAIMLERMIAVNSGMASIASPPFRAPLPIPL 582

Query: 69  DLVKVVVIFGGEPMSAVPAAPS 4
           +   V V+FGGEPMS  P  PS
Sbjct: 583 ETEYVDVVFGGEPMSG-PDRPS 603


>UniRef50_Q4DRY2 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma|Rep: Putative uncharacterized protein -
           Trypanosoma cruzi
          Length = 171

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 138 PHCSQNRCPDVANGFSNGYHAPEDLVKVVVIF-GGEPMSAVPAA 10
           PHC +NRC ++     +G+   E   K VV F   +  SA PAA
Sbjct: 117 PHCYENRCTNIYKRVVHGHAKQESQKKNVVSFVFADGSSAAPAA 160


>UniRef50_A0XXC6 Cluster: Predicted secreted protein; n=2;
           Alteromonadales|Rep: Predicted secreted protein -
           Alteromonadales bacterium TW-7
          Length = 166

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +3

Query: 66  GLLVRGSHSRTRWPHPGIGSASNVVGLMPLRFYQFFWQSRSLRFFCGSRSFLIRSRSETT 245
           GLLV    +   +  PG G+ +   G+     + F WQ ++ +F  G++S+ ++S   + 
Sbjct: 14  GLLVPSYSALADFSLPGKGTITYSTGIQKEFDFGFAWQQKAEQFKIGAKSYNMQSIPSSY 73

Query: 246 AVLLT 260
           +V +T
Sbjct: 74  SVAIT 78


>UniRef50_A7EI98 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 901

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +2

Query: 11  AAGTADIGSPPKITTTFTRSSGAW*PFENPLATSGHRFCEQCG 139
           AAG  D G P   T  FT+++  W    NP    GH  C  CG
Sbjct: 599 AAGQGDNGVPTTCTNCFTQTTPLW--RRNP---EGHPLCNACG 636


>UniRef50_A6SAP8 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 989

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +2

Query: 11  AAGTADIGSPPKITTTFTRSSGAW*PFENPLATSGHRFCEQCG 139
           AAG  D G P   T  FT+++  W    NP    GH  C  CG
Sbjct: 691 AAGQGDNGVPTTCTNCFTQTTPLW--RRNP---EGHPLCNACG 728


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,280,521
Number of Sequences: 1657284
Number of extensions: 7371851
Number of successful extensions: 21141
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21135
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)