Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P24
         (395 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066776-1|AAH66776.1|  388|Homo sapiens zinc finger, DHHC-type ...    30   2.4  
AL583846-1|CAH73677.1|  780|Homo sapiens RP11-73O6.1 protein.          30   3.2  
AL355581-1|CAI95325.1|  780|Homo sapiens RP11-73O6.1 protein.          30   3.2  
AB058701-1|BAB47427.1|  781|Homo sapiens KIAA1798 protein protein.     30   3.2  
BC036380-1|AAH36380.1| 1380|Homo sapiens KIAA0980 protein protein.     29   5.6  
AL031672-2|CAI43018.1| 1382|Homo sapiens novel protein protein.        29   5.6  
AB023197-1|BAA76824.1| 1406|Homo sapiens KIAA0980 protein protein.     29   5.6  
BC108907-1|AAI08908.2|  917|Homo sapiens TJP3 protein protein.         29   7.4  
BC108906-1|AAI08907.1|  938|Homo sapiens TJP3 protein protein.         29   7.4  
AC005954-1|AAC72274.1|  952|Homo sapiens ZO-3 [Homo sapiens] pro...    29   7.4  

>BC066776-1|AAH66776.1|  388|Homo sapiens zinc finger, DHHC-type
           containing 18 protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 48  SRRPSPGLLVRGSHSRTRWPHPG--IGSASNVVGLMPLRFYQFFWQSRSLRFFCGSRSFL 221
           S  P PG     + +  RW   G   GS S  +G  P R ++ F   R+ RF+CG R  L
Sbjct: 30  SPTPGPGPAPPAAPAPPRWSSSGSGSGSGSGSLGRRPRRKWEVF-PGRN-RFYCGGRLML 87


>AL583846-1|CAH73677.1|  780|Homo sapiens RP11-73O6.1 protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 35  SPPKITTTFTRSSGAW*PFENPLATSGHRFCEQC 136
           SPP   T F+  +G     ++P+   G +FCE C
Sbjct: 90  SPPGCPTVFSEKTGMPFRLKDPVKVEGLQFCENC 123


>AL355581-1|CAI95325.1|  780|Homo sapiens RP11-73O6.1 protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 35  SPPKITTTFTRSSGAW*PFENPLATSGHRFCEQC 136
           SPP   T F+  +G     ++P+   G +FCE C
Sbjct: 90  SPPGCPTVFSEKTGMPFRLKDPVKVEGLQFCENC 123


>AB058701-1|BAB47427.1|  781|Homo sapiens KIAA1798 protein protein.
          Length = 781

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 35  SPPKITTTFTRSSGAW*PFENPLATSGHRFCEQC 136
           SPP   T F+  +G     ++P+   G +FCE C
Sbjct: 91  SPPGCPTVFSEKTGMPFRLKDPVKVEGLQFCENC 124


>BC036380-1|AAH36380.1| 1380|Homo sapiens KIAA0980 protein protein.
          Length = 1380

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 154 SGISPTTLLAEPMPGCGQRVLEWLPRTRRPGEGR 53
           SG   T  L    PGCG+R L WL     PG+GR
Sbjct: 838 SGQEGTRGLLPLRPGCGERPLAWL----APGDGR 867


>AL031672-2|CAI43018.1| 1382|Homo sapiens novel protein protein.
          Length = 1382

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 154 SGISPTTLLAEPMPGCGQRVLEWLPRTRRPGEGR 53
           SG   T  L    PGCG+R L WL     PG+GR
Sbjct: 838 SGQEGTRGLLPLRPGCGERPLAWL----APGDGR 867


>AB023197-1|BAA76824.1| 1406|Homo sapiens KIAA0980 protein protein.
          Length = 1406

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 154 SGISPTTLLAEPMPGCGQRVLEWLPRTRRPGEGR 53
           SG   T  L    PGCG+R L WL     PG+GR
Sbjct: 862 SGQEGTRGLLPLRPGCGERPLAWL----APGDGR 891


>BC108907-1|AAI08908.2|  917|Homo sapiens TJP3 protein protein.
          Length = 917

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 42  QRSRRPSPGLLVR-GSHSRTRWPHPGIGSASNVVGLM 149
           +RSRRP PG   R GSH R     PG GS +N + L+
Sbjct: 144 ERSRRPRPGRRGRAGSHGRR---SPGGGSEANGLALV 177


>BC108906-1|AAI08907.1|  938|Homo sapiens TJP3 protein protein.
          Length = 938

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 42  QRSRRPSPGLLVR-GSHSRTRWPHPGIGSASNVVGLM 149
           +RSRRP PG   R GSH R     PG GS +N + L+
Sbjct: 163 ERSRRPRPGRRGRAGSHGRR---SPGGGSEANGLALV 196


>AC005954-1|AAC72274.1|  952|Homo sapiens ZO-3 [Homo sapiens]
           protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 42  QRSRRPSPGLLVR-GSHSRTRWPHPGIGSASNVVGLM 149
           +RSRRP PG   R GSH R     PG GS +N + L+
Sbjct: 163 ERSRRPRPGRRGRAGSHGRR---SPGGGSEANGLALV 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,209,334
Number of Sequences: 237096
Number of extensions: 1156100
Number of successful extensions: 5342
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5342
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)