Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P24
(395 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 3.9
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 28 3.9
AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA... 28 5.2
AF217845-1|AAF34753.1| 1178|Drosophila melanogaster DESERT protein. 27 6.8
AE014296-1518|AAN11996.1| 1235|Drosophila melanogaster CG32025-P... 27 6.8
AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p pro... 27 9.0
AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of P... 27 9.0
AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA... 27 9.0
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 131 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 163
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 161 LSILLAISVTSVLLRISLIPDSITQ*NYCGSPH 259
LS +LA SVL +I D +T YC PH
Sbjct: 188 LSAMLATLEQSVLCQIETASDIVTVLRYCSRPH 220
>AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA
protein.
Length = 2733
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -3
Query: 132 CSQNRCPDVANGFSNGYHAPEDLVKVVVIFGGEP 31
C P +A + H P ++K+++++GGEP
Sbjct: 1102 CEVYLWPGIARLSQDSIHTPTPMLKLLLLWGGEP 1135
>AF217845-1|AAF34753.1| 1178|Drosophila melanogaster DESERT protein.
Length = 1178
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 45 RSRRPSPGLLVRGSHSRTRWPHPGIGSASNVVG 143
RSR PSP L + +++R P P I SA + +G
Sbjct: 108 RSRDPSPVALEHTNRNKSRDPSPVIDSARSKLG 140
>AE014296-1518|AAN11996.1| 1235|Drosophila melanogaster CG32025-PA
protein.
Length = 1235
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 45 RSRRPSPGLLVRGSHSRTRWPHPGIGSASNVVG 143
RSR PSP L + +++R P P I SA + +G
Sbjct: 108 RSRDPSPVALEHTNRNKSRDPSPVIDSARSKLG 140
>AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p
protein.
Length = 538
Score = 27.1 bits (57), Expect = 9.0
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = -2
Query: 310 HQE*GDPQ*FHCVIESGVRRTAVVSLRDRIRN 215
H + P F+C+++ G+++ ++SLR +++
Sbjct: 197 HLKRSSPSLFNCLVKRGIKKVQILSLRRSLKD 228
>AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of
Paired protein.
Length = 538
Score = 27.1 bits (57), Expect = 9.0
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = -2
Query: 310 HQE*GDPQ*FHCVIESGVRRTAVVSLRDRIRN 215
H + P F+C+++ G+++ ++SLR +++
Sbjct: 197 HLKRSSPSLFNCLVKRGIKKVQILSLRRSLKD 228
>AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA
protein.
Length = 538
Score = 27.1 bits (57), Expect = 9.0
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = -2
Query: 310 HQE*GDPQ*FHCVIESGVRRTAVVSLRDRIRN 215
H + P F+C+++ G+++ ++SLR +++
Sbjct: 197 HLKRSSPSLFNCLVKRGIKKVQILSLRRSLKD 228
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,018
Number of Sequences: 53049
Number of extensions: 343982
Number of successful extensions: 883
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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