Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P24
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    25   0.24 
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    25   0.24 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   2.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   3.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   6.8  
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    21   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   9.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   9.0  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 132 NVVGLMPLRF--YQFFWQSRSLRFFCGSRSFL 221
           N++  +P+++  Y++ W S  L + CG  S L
Sbjct: 510 NIIKFVPVKYLTYEYPWWSHVLGWLCGLSSML 541


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 132 NVVGLMPLRF--YQFFWQSRSLRFFCGSRSFL 221
           N++  +P+++  Y++ W S  L + CG  S L
Sbjct: 563 NIIKFVPVKYLTYEYPWWSHVLGWLCGLSSML 594


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 198 FCGSRSFLIRSRSETTAVLLTP 263
           +CG+ +  I S S    V+LTP
Sbjct: 110 YCGNITLNIESTSNKMTVILTP 131


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 148  ISPTTLLAEPMPGCGQRVLEWLP 80
            I+PTT+ +   PG  Q+ ++  P
Sbjct: 1277 IAPTTITSSQSPGNQQQTIQTQP 1299


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 15  RVLRT*VPLQRSRRPSPGLLVRGSHSRTRWPHPGIGSASN 134
           ++++T  P+    +   GL +  ++  +  PH    SASN
Sbjct: 2   KIMQTTQPVSLQTQRIQGLYLLDNNDSSGIPHSAESSASN 41


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 117 CPDVANGFSNGYHAPE 70
           C D A+GF  G H+ E
Sbjct: 12  CGDKASGFHYGVHSCE 27


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 117 CPDVANGFSNGYHAPE 70
           C D A+GF  G H+ E
Sbjct: 70  CGDKASGFHYGVHSCE 85


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 329 TAVLLTPNSITQ*KYCGTRS 388
           +AVLL  + +++  YCG R+
Sbjct: 673 SAVLLISDRLSRDLYCGIRA 692


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 329 TAVLLTPNSITQ*KYCGTRS 388
           +AVLL  + +++  YCG R+
Sbjct: 711 SAVLLISDRLSRDLYCGIRA 730


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,409
Number of Sequences: 438
Number of extensions: 1983
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)