Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P22
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 42 5e-05
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 29 0.60
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 29 0.60
SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces p... 28 0.80
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 27 1.8
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 26 3.2
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 26 3.2
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 3.2
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 26 4.2
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 4.2
SPAC1F12.07 |||phosphoserine aminotransferase |Schizosaccharomyc... 26 4.2
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 25 5.6
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 25 5.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 7.4
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 25 7.4
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 25 9.8
SPCC191.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 9.8
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 25 9.8
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 25 9.8
SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase Gmh1|Schizosa... 25 9.8
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 42.3 bits (95), Expect = 5e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2
Query: 326 PASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITDFLKPR 472
P ST+P AL R P++ + P++ AP K T +S PES+ TT T +K R
Sbjct: 418 PTSTMPEALPREPLSFSLPEK-APEKATNISIPESAPTTAGSTCKVKVR 465
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 28.7 bits (61), Expect = 0.60
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = -3
Query: 207 LFSSRSTHPNKFLLTPSSVVTPRTRSDLVSNTVVVACRPGALTLKADISTESETLQRLAS 28
LF S N+ LL+ S +T D+V++ V C P LTLK + S + L RL
Sbjct: 118 LFESSKPCLNQ-LLSYFSDITAFRSMDVVADIAFV-CSPNFLTLKWNSSLFDDDLARLLF 175
Query: 27 ATLSSPSTN 1
++S TN
Sbjct: 176 FMINSKITN 184
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 281 EKPLPGTQRFAWQLVPASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTK 445
EKP+P + P+ST P + P + + A S+ K S P++++T +
Sbjct: 158 EKPMPDLGAEQKESAPSSTKPAPDAKEPEFSSPKPKPAKSEPVKQSKPKATETAR 212
>SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 145
Score = 28.3 bits (60), Expect = 0.80
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 398 SKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSPGHT 514
S+E + +SK TK + + K +KR NK K PGHT
Sbjct: 12 SEEDGTTQEANSKDTKGLKEERKRKKR-KNKYKIPPGHT 49
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 344 VALRRSPITIATPKQTAPSKETKVSSPESSKTTK 445
+ L++S I TP++T S + SSP SSK K
Sbjct: 240 LTLKQSTIIPRTPQKTVRSIVKQTSSPHSSKMPK 273
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 332 STIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITDF 460
ST+P+ L + + P++ A S E + PE K + I +
Sbjct: 80 STLPLELTQEVQEVRLPRKDAESLEIGIRQPEREKRSSAILKY 122
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 422 PESSKTTKRITDFLKPRKRLSNKGKKSPGHTLK 520
PE+ K+++R TD + RKR +S T+K
Sbjct: 20 PEALKSSRRWTDRARDRKRQKRNSNESSKSTVK 52
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.2 bits (55), Expect = 3.2
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = -1
Query: 209 VYFPLGQHIQINSFLLPRAWS 147
+Y +GQH+ +++P+ W+
Sbjct: 161 IYIKIGQHLSAMGYVIPKEWT 181
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 326 PASTIPVALRRSPITIATPKQTAPSKETK-VSSPESSKTTKRI 451
P STI AL+R + + + SKE K SP KT K +
Sbjct: 637 PTSTIGKALQRVASVTSPSRHNSDSKEKKQTKSPSLVKTLKEM 679
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 311 AWQLVPASTIPVALRRSPITIATPKQTAPSKETKVSSPE 427
A+ P STI + P T+A P + ET +S PE
Sbjct: 731 AFSTAPVSTIVSNISPLP-TVAPPNVSGSPSETPISKPE 768
>SPAC1F12.07 |||phosphoserine aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 4.2
Identities = 7/30 (23%), Positives = 21/30 (70%)
Frame = +2
Query: 131 LRVRGVTTLEGVRRNLFGCVDREENRRIVE 220
++++G ++ G+R +L+ + E+ RR+++
Sbjct: 349 VQLKGYRSVGGIRASLYNAISVEQTRRLID 378
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 216 LKENSRDNWNWIVRDGASISQTRNLYLAHRDSRGNLYQP 332
L N +NW + + AS + + +LYL +R S ++ P
Sbjct: 184 LVHNKSENWMFFILLNASSAISMSLYLLYRVSSFSISNP 222
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 452 TDFLKPRKRLSNKGKKSPGHT 514
TD+ RK+ N GK+ PG T
Sbjct: 96 TDWFYERKKFKNAGKEMPGAT 116
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -2
Query: 289 RFLVCEIEAPSLTIQFQLSREFSFNDSSI 203
R L C++E T+Q+Q+S N +++
Sbjct: 557 RALECDVEIQKQTVQYQISNAVKENSNTL 585
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 374 ATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSPGHTLKLECV 532
A K S+E ++ + +++ + + RK+ SNK KK K + V
Sbjct: 735 AKVKDEESSEEELMNDEQMLALDEKLAEVFRERKKASNKEKKKNAQETKQQIV 787
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 326 PASTIPVALRRSPITIATPKQTAPSKETKVSS 421
P S+IP + I+ T K+T PSK K S+
Sbjct: 234 PDSSIPPSESSVSISTDTGKETPPSKSKKSSN 265
>SPCC191.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 138
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 260 ISDYPIPIVSRVLFQRFVYFPLGQ 189
I+ PIP+ R+L +YFP Q
Sbjct: 69 IAYQPIPVFQRLLHSNDIYFPYFQ 92
>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 992
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 290 LPGTQRFAWQLVPASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITD 457
L RF + ++P+ST P L+ + A Q SK T E KT+ ++ +
Sbjct: 478 LENKSRFVFTMLPSSTFPQRLQEAE---AKKLQERTSKLTDEDIAEIEKTSVKLLE 530
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 442 CGFTALRTRNFSLLGWCSLFWCRDCNGRP-SQSNGNSRGWYKLPRES 305
C +AL +++ +C+ +W DC P + N R W K P S
Sbjct: 412 CHKSALVSQSILACDYCNSYWHPDCLNPPLATLPSNLRKW-KCPNHS 457
>SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase
Gmh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 62 EMSALSVRAPGLQATTTVLDTRSLRVRGVTTL 157
E+S + P LQ TTV + + G TTL
Sbjct: 38 EISVFDFKLPALQYETTVTSLDNFLIGGSTTL 69
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,307,909
Number of Sequences: 5004
Number of extensions: 48002
Number of successful extensions: 194
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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