Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P22
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0138 + 23067885-23068245,23068393-23068634 35 0.050
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 32 0.35
05_05_0282 + 23813500-23813584,23813676-23813734,23813940-23814368 29 1.9
04_04_0199 - 23519597-23520282,23520913-23521471 29 1.9
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773... 29 2.5
11_06_0414 - 23247896-23248654,23249400-23249879,23251924-232520... 28 4.3
02_05_1050 - 33757432-33757664,33757767-33758645,33758720-337591... 28 5.7
02_01_0092 - 650534-650553,650638-651013,651125-651349 28 5.7
10_08_0345 - 16985194-16985260,16985407-16985610,16987780-16988093 27 7.5
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 27 7.5
03_06_0066 + 31409676-31410034,31412237-31412351,31412482-314125... 27 7.5
01_06_1589 - 38477318-38477411,38477833-38478863 27 7.5
10_08_0836 - 20922861-20923096,20923193-20923340,20923541-209236... 27 10.0
09_06_0268 + 21942591-21942690,21942821-21942904,21943116-219431... 27 10.0
08_01_1084 - 11120719-11120950,11121035-11121133,11122446-111228... 27 10.0
04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174... 27 10.0
>04_04_0138 + 23067885-23068245,23068393-23068634
Length = 200
Score = 34.7 bits (76), Expect = 0.050
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +2
Query: 263 GFDFANEKPLPGTQRFAWQLVPASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTT 442
GFD P P + P ST P +T A P+Q PS +T +PE S
Sbjct: 121 GFDLGGAAPSPPVS--VPRSTPNSTAPSTPTPVTVTRAPPQQMTPSPKTSSQTPEYSSGL 178
Query: 443 KRITD 457
K I D
Sbjct: 179 KLIAD 183
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 350 LRRSPITIATPKQTAPSKETKVS--SPESSKTTKRITDFLKPRKRLSNKGKKSPGHTLKL 523
L SP T +PKQ P+K +S SP ++ + P RL +GK H L+L
Sbjct: 203 LLSSPFTRPSPKQPPPTKPAAISPASPSPARCSATAAASAVP-GRLQAQGKAEEEHQLRL 261
Query: 524 ECVHGTHIR 550
+H H++
Sbjct: 262 --LHNRHLQ 268
>05_05_0282 + 23813500-23813584,23813676-23813734,23813940-23814368
Length = 190
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +2
Query: 278 NEKPLPGTQRFAWQLVPASTIPVALRRSPITIATPKQTA---PSKETKVSSPESSKTTKR 448
N K PG + +V A+T V + P A P+ P +E V ++ T
Sbjct: 110 NPKSPPGREMSVQGMVAAAT-DVEVNDYPAPGANPRHNPKRPPGREMSVQGMVAATTDVE 168
Query: 449 ITDFLKPRKRLSNKGKKSPG 508
+ D+L P + K+ PG
Sbjct: 169 VNDYLAPGANPRHNPKRPPG 188
>04_04_0199 - 23519597-23520282,23520913-23521471
Length = 414
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 204 IDESLKENSRDNWNWIVRDGASISQTRNLYLAHRDSRGNLYQPL 335
+D S ++N + W+WI +DG ++++ + +++ N Q L
Sbjct: 148 LDRSEEQNEENEWSWIPQDGDPLAESMSSLQTTQEALENEMQKL 191
>08_02_1237 +
25475219-25475916,25476127-25476320,25476407-25477302,
25477416-25477490,25477582-25477689,25477780-25477897,
25478007-25478142,25478228-25478372,25478460-25479080,
25479166-25479597
Length = 1140
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 161 PRAWSLHGRVAT*CPTLSSWPAGRALSHLKQTSQQSP 51
PR W R T P+ + LSH +Q QQSP
Sbjct: 53 PRMWDWDSRALTAKPSSDALRVNAGLSHHQQQQQQSP 89
>11_06_0414 -
23247896-23248654,23249400-23249879,23251924-23252091,
23252223-23252231
Length = 471
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Frame = +1
Query: 274 RKRETFTWHTEIRVAT--CTSLYY 339
++RE+F+W +RVAT CT+L +
Sbjct: 262 KQRESFSWEERVRVATSICTALVF 285
>02_05_1050 -
33757432-33757664,33757767-33758645,33758720-33759109,
33759488-33759613,33760497-33760557
Length = 562
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 224 ELARQLELDSQRWGFDFANEKPLPGTQRFAWQLVPASTIPVALRRSPITIATPKQTA 394
ELA+QL+LD++ D E GT + + P +T +A S + ++ TA
Sbjct: 280 ELAQQLQLDTKNNSNDIITEAIAYGTNQADLLVAPVTTDAIASGSSQVNLSAFPVTA 336
>02_01_0092 - 650534-650553,650638-651013,651125-651349
Length = 206
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 200 ENRRIVERELARQLELDSQRWGFDFANEKPLPGTQRFAWQLVPASTIPVALRRSPITIAT 379
+N R + + +QL S++ ++ + F+W + A + + +SP+ A
Sbjct: 82 QNSRRKQEQQQQQLTTTSRQSDGGMSSSPVSSKSDSFSWDIATAESCSSSPAQSPLWPAA 141
Query: 380 PKQTAPSKETK 412
+Q +PS TK
Sbjct: 142 LRQFSPSPATK 152
>10_08_0345 - 16985194-16985260,16985407-16985610,16987780-16988093
Length = 194
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 164 VRRNLFGCVDREENRRIVERELARQLELDSQRWGFDFANEKPLPGTQRFAW 316
VR N+ E E + RQ +D ++ FD N+ PLPG RF W
Sbjct: 144 VRHNIIPASAELEAFFAAEEQRQRQAFID--KYNFDPVNDCPLPG--RFEW 190
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +2
Query: 371 IATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSPGH 511
+ T Q+ P S+P + + PR+R S G +PGH
Sbjct: 20 VVTEHQSPPPANGLPSTPPRQQAQAQAQQVGTPRRRGSKSGSTTPGH 66
>03_06_0066 +
31409676-31410034,31412237-31412351,31412482-31412552,
31412942-31413036,31414143-31414214,31414293-31414456,
31414725-31414760
Length = 303
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 422 PESSKTTKRITDFLKPRKRLSNKGKKSPG 508
P +S + +R T KP+KR N+GKK G
Sbjct: 215 PVTSASPERSTPKEKPQKRERNEGKKQKG 243
>01_06_1589 - 38477318-38477411,38477833-38478863
Length = 374
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 548 ECGSRGRTQVSTCDQGISCPCSITAYAVSGNRLFFL 441
E G G + D + CS +A+ V GNR++F+
Sbjct: 274 EVGDLGDRALLLGDANAALLCSASAHGVKGNRVYFM 309
>10_08_0836 -
20922861-20923096,20923193-20923340,20923541-20923621,
20924407-20924532
Length = 196
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +2
Query: 47 VSDSVEMSALSVRAPGLQATTTVLDTRSLRVRGVTTLEGVRRNLFGCVDREENRRIVERE 226
V+ V+ L+ G + + TR L +RGV + VR G RE R +
Sbjct: 104 VTAGVDARGLAAVVTGASSGIGLETTRVLALRGVRVVMAVRNVAAGHKAREAIRAEIHGA 163
Query: 227 LARQLELD 250
+ LE+D
Sbjct: 164 IVHVLEMD 171
>09_06_0268 +
21942591-21942690,21942821-21942904,21943116-21943192,
21943266-21943336,21943646-21943717,21943894-21943965,
21944057-21944122,21944411-21944476,21944553-21944770,
21944983-21945254,21945513-21945778,21945879-21945999,
21946094-21946230,21946362-21946518,21947055-21947189
Length = 637
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = +1
Query: 292 TWHTEIRVATCT--SLYYSR--CSEKVAHYN 372
TW T +R+A CT +L Y CS V H N
Sbjct: 439 TWDTRVRIAACTAHALEYLHEVCSPPVLHKN 469
>08_01_1084 -
11120719-11120950,11121035-11121133,11122446-11122849,
11123559-11124197
Length = 457
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 329 ASTIPVALRRSPITIATPKQTAPSKETKVSSP 424
A+ IPV LRRS T P T+ S + S P
Sbjct: 59 ATPIPVVLRRSLRTRGLPPSTSTSSSSAASPP 90
>04_01_0150 +
1741639-1741742,1742432-1742543,1742856-1743594,
1743724-1743776,1743914-1743991,1744107-1744405,
1744660-1745476,1745576-1745842,1745987-1746181,
1746287-1746372,1746469-1746657,1747138-1747207,
1747399-1747552,1747706-1747832,1749158-1749254
Length = 1128
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 341 PVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSPG 508
PV PI +A+P T+PS K S P+ S + ++ + RL++ + G
Sbjct: 528 PVTQTVQPIQVASPHVTSPSAYGKSSVPKPS-VARVVSHSASIKSRLASSPSRPEG 582
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,303,127
Number of Sequences: 37544
Number of extensions: 319384
Number of successful extensions: 1058
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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