Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P22
(551 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33877| Best HMM Match : CDI (HMM E-Value=2.2e-12) 55 4e-08
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_42677| Best HMM Match : TUDOR (HMM E-Value=0) 31 0.47
SB_57118| Best HMM Match : TMS_TDE (HMM E-Value=0) 31 0.47
SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 30 1.1
SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11) 29 1.9
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 28 4.4
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 4.4
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 28 4.4
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_53761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_39779| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_34199| Best HMM Match : Nucleoplasmin (HMM E-Value=3.1) 28 5.8
SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38) 28 5.8
SB_517| Best HMM Match : PTN_MK_C (HMM E-Value=2.4) 28 5.8
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_17118| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_40914| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_54817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_33877| Best HMM Match : CDI (HMM E-Value=2.2e-12)
Length = 228
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 164 VRRNLFGCVDREENRRIVERELARQLELDSQRWGFDFANEKPLPGTQRFAW 316
VRR LFG VD E+ + ++RE+ + +E +S+RW FDFA+E P G R+AW
Sbjct: 26 VRRCLFGPVDHEQTKADLQREIKKVVESESRRWNFDFASETPQVG--RYAW 74
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +2
Query: 203 NRRIVERELARQLELDSQRWGFDFANEKPLPG--TQRFAWQLVPASTIPVALRRSPITIA 376
N + + EL+RQ R N+ L G R + Q + + T L R P+T
Sbjct: 64 NSQTNQSELSRQPVTSLSRKSISQTNQTELSGLAVTRLSTQSI-SQTNQTELSRQPVTSL 122
Query: 377 TPKQTAPSKETKVS-SPESSKTTKRIT 454
+ K + +K+T++S P +S +TK I+
Sbjct: 123 STKSISQTKQTELSRQPVTSLSTKSIS 149
>SB_42677| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 1150
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 374 ATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSP 505
ATP + + S+E+ +P K ++ F PRKR K K P
Sbjct: 900 ATPFRQSTSEESPQKAPAQFKVVEKPATFTSPRKRTRGKTKMRP 943
>SB_57118| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 1457
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 326 PASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSN 487
P +I S T+A+PK+ E +S ++ +T + + F+ PRK L +
Sbjct: 1259 PKKSISPLEEASLKTVASPKKDIQHSEQSISPRKNRRTVHKTSPFVSPRKELKS 1312
>SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 31.1 bits (67), Expect = 0.63
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 RCSVSDSVEMSALSVRAPGLQATTTVLDTRSLRVRGVTTLEGVRRNLFGC-VDREENRRI 214
R +S E S LS PGL+ L + R + + L R FGC V+
Sbjct: 4 RSRLSGGDEFSRLSTEVPGLRLQALNLPSGGTRQQQIDRLRQATRGDFGCQVNICCASAS 63
Query: 215 VERELARQLELDS 253
+ERE+ RQ D+
Sbjct: 64 LEREIQRQRNTDT 76
>SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 30.7 bits (66), Expect = 0.83
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 311 AWQLVPASTIPVALRRSPITIATPKQTAPS-KETKVSSPESSKTTKRITDFLKPRKRLSN 487
+++L A+ P P ATPK+ P+ K K ++P+ K+ P+K S
Sbjct: 112 SFKLTAAAKKPAKKAVKPKKKATPKKKKPAAKPKKKATPKKKAAAKKTKKAKSPKKAKSP 171
Query: 488 KGKKSP 505
K K P
Sbjct: 172 KKAKKP 177
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 362 PITIATPKQTAPSKETKVSSPESSKTT 442
P+ TP+ T+ S++TK+ SPES T
Sbjct: 732 PVYTDTPRSTSLSRDTKLGSPESDTVT 758
>SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 104 TTTVLDTRSLRVRGVTTLEGVRRNLFGCVDREENRRIVERELARQLELDSQRWGFDFANE 283
TT+ ++ + +GV LE +N+FG +D E RR++ EL ++ + + F F N+
Sbjct: 447 TTSTMEWHHFK-QGVFILESEGQNVFGQLDAESYRRVL--ELIQEAIIATDLMLF-FGNK 502
Query: 284 KPLPGTQR---FAWQ 319
K L Q F W+
Sbjct: 503 KELETLQENKAFRWE 517
>SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)
Length = 1417
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = -2
Query: 259 SLTIQFQLSREFSFNDSSIFLSVNTSK*IPSYSLERGHSTDA*RPSVQHCRRGLQAGRSH 80
SL I R FS S L++ T S + + G+ + H R+G +
Sbjct: 73 SLGISQSWVRAFSNTHSFFLLALQTKPVTKSTTRKGGNMARVTHRHLNHVRKGKAGNMAR 132
Query: 79 T*SRHLNRVRNTTT 38
RHLN VR T
Sbjct: 133 VTHRHLNHVRKGRT 146
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 194 REENRRIVERELARQLELDSQRWGFDFANEKPLPGTQRFAWQLVPASTIPVALRRSPITI 373
+ +N+R+ E +L+ D++R N KP P +R A A P +RSPI+
Sbjct: 1498 KPDNQRLAISEGNAKLKPDNRRSAISEGNAKPKPDNRRSATSEENAKLKP-DNQRSPISE 1556
Query: 374 ATPKQTAPSKETKVSSPESSK 436
K P + S E++K
Sbjct: 1557 ENDK-LKPDNQRSAISEENAK 1576
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 347 ALRRSPITIATPKQTAPSKETKVSSPESSKTTKRI---TDFLKPRKRLSNKGKKSPG 508
A R+SP + K +A S + K + ESSK K I LK +KR S KK+ G
Sbjct: 146 ANRKSPANKKSHKPSAESVKGKSHNDESSKAKKLIKGRKKQLKEQKRESKGAKKTDG 202
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 368 TIATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSPGHTLKLECVHG 538
T + P+ ET+ SP+SS+ R PRK + + + T ++E G
Sbjct: 287 TPSPPQGEVVENETRSGSPKSSRPLARSRPARPPRKHIEKRRESGNSETEEIETSEG 343
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 332 RLVQVATRISVCQVKVSRLRNRSPISDYPIPIVSR 228
RLV++ RI S +R ++P++ YP+ + SR
Sbjct: 2434 RLVKIVGRIQARVCTASVIRRKAPVAIYPLNVQSR 2468
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 380 PKQTAPSKETKVSSPESSKTTKRITDFL--KPRKRLSNKGKKS 502
PK+ A +K K + + S + +D KP+K+ NKGKK+
Sbjct: 162 PKKKADNKGKKTQAKQESSSEDDSSDEEDEKPKKKADNKGKKT 204
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +2
Query: 191 DREENRRIVERELARQLELDSQRWGFDFANEKPLPGTQRFAWQLVPASTIPVALRRSPIT 370
D+ E R +++R +A Q++ + Q G +P + +P + P ++ R
Sbjct: 979 DKHELRSLLQRFVAEQVK-ECQVDGPPINETRPTASIALDHFTSMPTKSTPTSMPRK--- 1034
Query: 371 IATPKQTAPSKETKVSSPESSKTT 442
TP + P+K T S P + T
Sbjct: 1035 --TPNTSMPTKSTPTSMPRKTPNT 1056
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 347 ALRRSPITIATPKQTAPSKETKVSSPES 430
A+++SP T+ TP T P + +++S ES
Sbjct: 172 AVQQSPQTLPTPTHTTPRVDPEITSEES 199
>SB_53761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 271 FRKRETFTWHTEIRVATCTSLYYSRCSEKVAHYNRDTKTNCTIQGD*SFES 423
F K++ + + IR +T LY+S E N DTK + +++G S ++
Sbjct: 59 FNKKKCYVV-SGIRKSTNNDLYFSNTREAYNFLNTDTKISASLEGKYSMKA 108
>SB_39779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 353 RRSPITIATPKQTAPSKETKVSSPESSKTTKRITDF---LKPRKR-LSNKGKKSPGHTLK 520
R + +TPKQ A S T SS E S + T+F L R+R + ++ P +
Sbjct: 8 RSKQVRFSTPKQNASSDSTLSSSREESFHSTGSTEFDEMLASRRRNVHPDERRKPSKVTR 67
Query: 521 LECV 532
L C+
Sbjct: 68 LLCL 71
>SB_34199| Best HMM Match : Nucleoplasmin (HMM E-Value=3.1)
Length = 118
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +2
Query: 359 SPITIATPKQTAPSKETKVSSPESSKT----TKRITDFLKPRKR 478
SP+T++ K T + K S E K K TD LKPR+R
Sbjct: 20 SPVTVSQNKFTLGRAQDKCRSDEEIKEMDARNKITTDMLKPRRR 63
>SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38)
Length = 184
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 329 ASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITDFLKPRKRLSNK 490
A+ P A + + +PK++AP K TK + K + KP+K + K
Sbjct: 109 AAKKPAAKKPAAKKAKSPKKSAPKKATKSPKKTAKKPAAKKPAAAKPKKAAAKK 162
>SB_517| Best HMM Match : PTN_MK_C (HMM E-Value=2.4)
Length = 83
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 392 APSKETKVSSPESSKTTKRITDFLKPRKRLSNKGKKSPGHTLKLECVH 535
A SK V E + KR D K + N KKS HT+K + H
Sbjct: 25 AVSKGRPVQLQEPTSKRKRSHDLAKVVQANVNSSKKSGSHTMKSKTKH 72
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 347 ALRRSPITIATPKQTAPSKETKVSSPES 430
A+++SP T+ TP T P + +++S ES
Sbjct: 300 AVQQSPQTLPTPTHTTPRVDPEITSEES 327
>SB_17118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 281 EKPLPGTQRFAWQLVPASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITDF 460
EKP ++A ++ + +SP T + +T SSPESS T R F
Sbjct: 179 EKPRETGVKYARSMIDVTDRSEMASKSPKTSFHGSAGNVAYKTGKSSPESSSTRARNDSF 238
Query: 461 LKP 469
L P
Sbjct: 239 LSP 241
>SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +2
Query: 401 KETKVSSPESSKTTKRITDFLKPRKRLSNKGKK----SPGHTLK 520
K +SP+S+KTT R P LS +G+K S G TL+
Sbjct: 384 KAASTTSPQSTKTTSRTNQGSPPSVTLSIRGEKFTMDSNGKTLR 427
>SB_40914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 323 VPASTIPVALRRSPITIATPKQTAPSKETKVSSPESSKTTKRITD 457
V + +P + R P++ ATP+ + K +S E K++ R+ D
Sbjct: 7 VVIARVPCGVTRQPVSRATPRPHSAPKWRLNTSTEQGKSSCRLCD 51
>SB_54817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 390 LHHPRRLKFRVLRAVKPQKE*PIS*NRVSGYRTRARNPLVT 512
L HP+R LR +K + + R+SG+RT R+ +T
Sbjct: 102 LSHPKRFSVYDLRVLKIMRTASHTRTRISGFRTLCRSHRLT 142
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 347 ALRRSPITIATPKQTAPSKETKVSSPESSKTTKRIT 454
A +R P T+A+PK++ P K + E + K ++
Sbjct: 31 ASKRMPFTLASPKRSLPRLSPKFTKKEKTPNGKNLS 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,129,439
Number of Sequences: 59808
Number of extensions: 390229
Number of successful extensions: 1699
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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