Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P22
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.6  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   4.8  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   6.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   6.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   6.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 159 SSVVTPRTRSDLVSNTV 109
           S  + PR+RS  +SNT+
Sbjct: 674 SDTIVPRSRSGSISNTL 690


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 388 LFWCRDCNGRPSQSNGN 338
           + W  DC+ +P   NG+
Sbjct: 21  MIWALDCSIKPKDHNGS 37


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 471 VSGYRTRARNPLVTR*NLSAST 536
           V+GYRT   +PL +R   + ST
Sbjct: 268 VNGYRTLFFHPLSSRREFAVST 289


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 497 KSPGHTLKLECVH 535
           KSP HT + +C+H
Sbjct: 326 KSPYHTPEPDCIH 338


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 482 ITAYAVSGNRLFFLWFY 432
           + +YAVSG  L FL F+
Sbjct: 445 LDSYAVSGFCLLFLMFF 461


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 482 ITAYAVSGNRLFFLWFY 432
           + +YAVSG  L FL F+
Sbjct: 498 LDSYAVSGFCLLFLMFF 514


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -2

Query: 262 PSLTIQFQLSREFSFNDSSIFLSVNTSK*IPSYSLER 152
           P+  +  +   +++FND+ I +       IP++++ R
Sbjct: 369 PASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHR 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,308
Number of Sequences: 438
Number of extensions: 3481
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)