Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_P21
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   1.7  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   1.7  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   1.7  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   1.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.7  

>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 155 NTVHNRKQQTRLRYHN 202
           NT+HN     +L+Y+N
Sbjct: 310 NTIHNNNNYKKLQYYN 325


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 155 NTVHNRKQQTRLRYHN 202
           NT+HN     +L+Y+N
Sbjct: 321 NTIHNNNNYKKLQYYN 336


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 155 NTVHNRKQQTRLRYHN 202
           NT+HN     +L+Y+N
Sbjct: 321 NTIHNNNNYKKLQYYN 336


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 155 NTVHNRKQQTRLRYHN 202
           NT+HN     +L+Y+N
Sbjct: 310 NTIHNNNNYKKLQYYN 325


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 200 CGILILFAVFYYVL 159
           CGI +LF   YY L
Sbjct: 9   CGIAVLFLALYYYL 22


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 546 LIVRSATY*NYLLFISQTLTFYAYNHFTLHKKV 448
           L  ++  + N L F+S  +  +AY    +HK++
Sbjct: 460 LTKQNTAFENQLQFVSDAVMAFAYAFRDMHKEL 492


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 266 SLCIIISLKKSVYENILFSFQIHINMY 346
           +LC+ ISL  +V    L+S +I+I ++
Sbjct: 739 TLCVAISLSATVTLVCLYSPKIYIILF 765


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 266 SLCIIISLKKSVYENILFSFQIHINMY 346
           +LC+ ISL  +V    L+S +I+I ++
Sbjct: 829 TLCVAISLSATVTLVCLYSPKIYIILF 855


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,407
Number of Sequences: 438
Number of extensions: 3295
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)