Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P18
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z68120-2|CAA92200.1| 218|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF016684-17|AAB66201.1| 463|Caenorhabditis elegans Hypothetical... 28 3.7
U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical pr... 27 6.5
U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 27 6.5
Z92832-3|CAB07372.1| 333|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 8.6
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 27 8.6
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 8.6
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 209 AAVMKTLRLENDGKGEVINLVVNRLLSEGKRNIV-EYAYKLWNMFGTN 349
AA + L+LE D + E + ++ + EG + EYA K WN+ G++
Sbjct: 256 AARLNILQLETDNEIESTHQLITSCMPEGYQLTEWEYALKFWNINGSS 303
>Z68120-2|CAA92200.1| 218|Caenorhabditis elegans Hypothetical
protein T24C2.2 protein.
Length = 218
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVG-DYKAAVMKTLRLENDG-KGEVI-NLVVNR--LLSEGKRNIVE 313
+ N NS + +++V D K A++ LRL+ DG K V N + + +L E K+ VE
Sbjct: 27 VENYNSENRFERTIIVANDNKTAILLILRLKQDGVKTSVFTNYLADDEIVLGEQKKAFVE 86
Query: 314 YAYKL 328
A+K+
Sbjct: 87 GAHKV 91
>AF016684-17|AAB66201.1| 463|Caenorhabditis elegans Hypothetical
protein F45C12.1 protein.
Length = 463
Score = 28.3 bits (60), Expect = 3.7
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Frame = +2
Query: 116 VAFINYEELSPLNNINSYEQLYDSVVVGDYKAAVMKTLRL-ENDGKGEVINLVVNRLLSE 292
V +N +L+ L ++ ++E + D V ++ K L E G G + N+V+ L +
Sbjct: 127 VKIVNNSQLTDLESLKNFELIQDYVECS-FEVQNNKMLDAKELCGHGLMQNMVIRGNLRD 185
Query: 293 GK--------RNIVEYAYKLWNMFGTNIVKDHFPKEFRMFLN 394
+ N+ EYA G + K HFP F F N
Sbjct: 186 CECRGDLITSENLHEYAKCRVLYNGLRLTKQHFPDNFSTFSN 227
>U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical
protein F22D3.2b protein.
Length = 635
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 46 DFNDNGAECTGDASV-PYTSKQPHGCI 123
D +D GA CT S+ P TS P G I
Sbjct: 27 DVDDKGASCTASTSLGPSTSSSPPGII 53
>U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical
protein F22D3.2a protein.
Length = 720
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 46 DFNDNGAECTGDASV-PYTSKQPHGCI 123
D +D GA CT S+ P TS P G I
Sbjct: 27 DVDDKGASCTASTSLGPSTSSSPPGII 53
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 28 NRDQR-NDFNDNGAECTGDASVPYTSKQPHGCIY*LRR 138
+R+Q+ DFND+ A T + PY S P+ +Y R+
Sbjct: 811 DREQKWFDFNDSSANPTYPPAEPYESSDPYILVYRRRK 848
>Z92832-3|CAB07372.1| 333|Caenorhabditis elegans Hypothetical
protein F31D4.4 protein.
Length = 333
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 332 NMFGTNIVKDHFPKEFRMFLNEDPVLIINKRDELALKLQLSMDNDGDRASFGDGADKTSH 511
N FGT + +++P FL + ++ +ALKL+ + DR +G D+T+
Sbjct: 271 NSFGT-VTSNNYPNSPDSFLIQYYLIQCPIAHHVALKLKAMQLDKSDRVKIFNGNDETAG 329
Query: 512 RL 517
+L
Sbjct: 330 KL 331
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 422 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 451
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 523 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 552
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 422 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 451
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 523 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 552
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 95 TPLSNLTVAFINYEELSPLNNINSYEQLYDSVV--VGDYKAAVMKTLRLEN 241
TP+S+L ++ + + S N + SYE + +SV+ D + +RL N
Sbjct: 33 TPVSSLLLSALLNDRNSTTNTLTSYENVQNSVICNFSDINCRLAAGMRLGN 83
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 149 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 238
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,239,081
Number of Sequences: 27780
Number of extensions: 206358
Number of successful extensions: 617
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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