Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P17
(434 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 224 6e-58
UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor [C... 222 3e-57
UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;... 220 1e-56
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 218 4e-56
UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen t... 217 6e-56
UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n... 217 8e-56
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 216 2e-55
UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocent... 207 9e-53
UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46; Eumet... 206 2e-52
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 204 5e-52
UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellu... 204 6e-52
UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabd... 201 6e-51
UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4; Strongyl... 201 6e-51
UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whol... 180 9e-51
UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor (G... 198 3e-50
UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstat... 192 4e-48
UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 ty... 188 3e-47
UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Da... 187 8e-47
UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice ... 186 2e-46
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ... 183 1e-45
UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Da... 183 1e-45
UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3; Endopterygota|... 182 3e-45
UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n... 179 2e-44
UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio "Co... 178 5e-44
UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precurso... 177 8e-44
UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG168... 175 3e-43
UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollage... 149 3e-35
UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium ... 141 5e-33
UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2; Platyhelminth... 130 2e-29
UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whol... 93 2e-18
UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma j... 77 1e-13
UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella ve... 75 9e-13
UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella ve... 74 2e-12
UniRef50_A4RDD1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_A0CNR1 Cluster: Chromosome undetermined scaffold_22, wh... 32 6.0
UniRef50_A7CTI8 Cluster: Putative uncharacterized protein precur... 31 8.0
>UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 2 SCAF14781,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1468
Score = 224 bits (548), Expect = 6e-58
Identities = 99/144 (68%), Positives = 111/144 (77%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY++G EKAHNQDLG AGSC+ +FSTMPFL+C+ D+C YASRND+SYWLST P+PM
Sbjct: 1303 SLLYMEGQEKAHNQDLGLAGSCLPRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPM 1362
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI YISRC VCE PS IAVHSQ + IP CPVGW LWIGYSF+MHT
Sbjct: 1363 MPVEDVEIKPYISRCSVCEAPSVAIAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEG 1422
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L+SPGSCLEDFR PFIECN
Sbjct: 1423 GGQSLSSPGSCLEDFRTTPFIECN 1446
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ HSQT IP CPVG ++LW GYS +++ L GSCL F +PF+ C
Sbjct: 1278 LLVKHSQTEQIPMCPVGMAKLWSGYS-LLYMEGQEKAHNQDLGLAGSCLPRFSTMPFLYC 1336
Query: 431 N 433
N
Sbjct: 1337 N 1337
>UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor
[Contains: Canstatin]; n=48; Tetrapoda|Rep: Collagen
alpha-2(IV) chain precursor [Contains: Canstatin] - Homo
sapiens (Human)
Length = 1712
Score = 222 bits (542), Expect = 3e-57
Identities = 98/144 (68%), Positives = 109/144 (75%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY +G EKAHNQDLG AGSC+ +FSTMPFL+C+ DVC YASRND+SYWLST P+PM
Sbjct: 1516 SLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPM 1575
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV +EI YISRC VCE P+ IAVHSQ + IP CP GW LWIGYSF+MHT
Sbjct: 1576 MPVAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEG 1635
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1636 GGQSLVSPGSCLEDFRATPFIECN 1659
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ HSQT P CPVG ++LW GYS +++ L GSCL F +PF+ C
Sbjct: 1491 LLVKHSQTDQEPMCPVGMNKLWSGYS-LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYC 1549
Query: 431 N 433
N
Sbjct: 1550 N 1550
>UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;
Bos taurus|Rep: Collagen alpha-2(IV) chain - Bos Taurus
Length = 227
Score = 220 bits (537), Expect = 1e-56
Identities = 97/144 (67%), Positives = 108/144 (75%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY +G EKAHNQDLG AGSC+ +FSTMPFL+C+ DVC YASRND+SYWLST P+PM
Sbjct: 31 SLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPM 90
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV +I YISRC VCE P+ IAVHSQ + IP CP GW LWIGYSF+MHT
Sbjct: 91 MPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEG 150
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 151 GGQSLVSPGSCLEDFRATPFIECN 174
Score = 49.6 bits (113), Expect = 3e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ HSQT P CPVG ++LW GYS +++ L GSCL F +PF+ C
Sbjct: 6 LLVKHSQTDKEPMCPVGMNKLWSGYS-LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYC 64
Query: 431 N 433
N
Sbjct: 65 N 65
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 218 bits (533), Expect = 4e-56
Identities = 94/146 (64%), Positives = 115/146 (78%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+ GN++AH QDLG AGSC+R+FSTMPF+FC++N+VCN+ASRND SYWLST +P+PM
Sbjct: 1488 SLLYVQGNKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPM 1547
Query: 182 --MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
P++G I +ISRC VCE P+ VIAVHSQT+ IP CP GW LWIGYSF+MHT
Sbjct: 1548 SMQPLKGQSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGA 1607
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
LASPGSCLE+FR+ PFIEC+
Sbjct: 1608 EGSGQALASPGSCLEEFRSAPFIECH 1633
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQT D P CP G +++ G+S +++ L + GSCL F +PF+ C
Sbjct: 1463 LITRHSQTTDAPQCPQGTLQVYEGFS-LLYVQGNKRAHGQDLGTAGSCLRRFSTMPFMFC 1521
Query: 431 N 433
N
Sbjct: 1522 N 1522
Score = 45.6 bits (103), Expect = 5e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 184
+++ + Q L GSC+ +F + PF+ C CNY + N S+WL+T M
Sbjct: 1600 MMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYA-NSYSFWLATVDVSDMF 1658
Query: 185 PVEGNEIVK------YISRCVVC 235
+E +K ISRC VC
Sbjct: 1659 SKPQSETLKAGDLRTRISRCQVC 1681
>UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen type
IV CG4145-PA, isoform A isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Collagen type IV
CG4145-PA, isoform A isoform 1 - Apis mellifera
Length = 1913
Score = 217 bits (531), Expect = 6e-56
Identities = 104/168 (61%), Positives = 122/168 (72%), Gaps = 24/168 (14%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLG------------------------YAGSCVRKFSTMPFLFCDL 109
SLL+ DG+E+AH+QDLG YAGSCVRKFSTMPFLFCD+
Sbjct: 1693 SLLFTDGDERAHSQDLGKSETYIAIDSKFFPRFSYDLVPFRYAGSCVRKFSTMPFLFCDI 1752
Query: 110 NDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPG 289
N+VC+Y +R DRSYWLST PIPMMPV+ +EI +YISRCVVCEVP+NV+AVHSQ+L+IP
Sbjct: 1753 NNVCHYGNRGDRSYWLSTTSPIPMMPVQESEIEQYISRCVVCEVPANVLAVHSQSLNIPD 1812
Query: 290 CPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
CP GW+ LWIGYSF+MHT L+S GSCLEDFRA PFIECN
Sbjct: 1813 CPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSSGSCLEDFRATPFIECN 1860
Score = 38.7 bits (86), Expect = 0.053
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLN-DVCNYASRNDRSYWLST------ 163
L++ + Q L +GSC+ F PF+ C+ N C+Y N+ S+W++T
Sbjct: 1827 LMHTGAGAQGGGQSLSSSGSCLEDFRATPFIECNGNKGQCHY-YMNEISFWMATIEDRQQ 1885
Query: 164 GQPIPMMPVEGNEIVKYISRCVVC 235
Q ++ + ISRC VC
Sbjct: 1886 FQAPEQQTLKAGNLRSKISRCQVC 1909
>UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n=5;
Diptera|Rep: Collagen alpha-1(IV) chain precursor -
Drosophila melanogaster (Fruit fly)
Length = 1775
Score = 217 bits (530), Expect = 8e-56
Identities = 97/144 (67%), Positives = 112/144 (77%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1581 SLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1637
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1638 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1697
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1698 GGQALQSPGSCLEDFRATPFIECN 1721
Score = 39.9 bits (89), Expect = 0.023
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1026
Score = 216 bits (527), Expect = 2e-55
Identities = 95/144 (65%), Positives = 107/144 (74%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY++G EKAHNQDLG GSC+ +FST+PFL+C N+VC YASRND+SYWLST IPM
Sbjct: 831 SLLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNEVCYYASRNDKSYWLSTTASIPM 890
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV +I YISRC VCE PS +AVHSQ + IP CP GW LWIGYSF+MHT
Sbjct: 891 MPVAEAQIQAYISRCSVCEAPSQAVAVHSQDMTIPTCPPGWRSLWIGYSFLMHTAAGAEG 950
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 951 GGQSLVSPGSCLEDFRATPFIECN 974
Score = 52.0 bits (119), Expect = 5e-06
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQ +P CP G ++LW GYS +++ L PGSCL F IPF+ C+
Sbjct: 810 HSQDAQVPMCPQGMAKLWDGYS-LLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCS 865
>UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocentrotus
purpuratus|Rep: 3 alpha procollagen - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 1752
Score = 207 bits (505), Expect = 9e-53
Identities = 88/146 (60%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLL++ GNE+ H QDLG GSC+++FSTMPFLFC++N+VC+ ASRND SYWLST +P+PM
Sbjct: 1555 SLLFVQGNERGHGQDLGKPGSCLKRFSTMPFLFCNINNVCHVASRNDYSYWLSTTEPMPM 1614
Query: 182 --MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
P+ G ++ +ISRCVVCE P+ V+ VHSQT++IP CP W LWIGYSF+MHT
Sbjct: 1615 NMAPIRGGQLQPFISRCVVCEAPAQVLTVHSQTVNIPDCPDRWGVLWIGYSFMMHTGPGG 1674
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L+SPGSCLEDFR+ PFIEC+
Sbjct: 1675 EGSGQMLSSPGSCLEDFRSSPFIECH 1700
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 254 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
I HSQT IP CP G +++W GYS ++ L PGSCL+ F +PF+ CN
Sbjct: 1531 ITRHSQTTSIPQCPQGTAKMWHGYS-LLFVQGNERGHGQDLGKPGSCLKRFSTMPFLFCN 1589
Score = 39.1 bits (87), Expect = 0.040
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS--TGQPIPMMP----VEGNE 202
Q L GSC+ F + PF+ C + CNY + ++WLS TG MP ++
Sbjct: 1679 QMLSSPGSCLEDFRSSPFIECHGDGKCNYYA-TTYTFWLSSITGNAQFTMPQSETLKAGS 1737
Query: 203 IVKYISRCVVC 235
+ +SRC VC
Sbjct: 1738 LRTRVSRCAVC 1748
>UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46;
Eumetazoa|Rep: Collagen alpha-4(IV) chain - Oryctolagus
cuniculus (Rabbit)
Length = 623
Score = 206 bits (502), Expect = 2e-52
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY++G EKAHNQDLG AGSC+ FST+PF +C+++ VC+YA RND+SYWL++ P+PM
Sbjct: 425 SLLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAYCNIHQVCHYAQRNDKSYWLASAGPLPM 484
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MP+ EI YISRC VCE P+ +AVHSQ IP CP W LWIGYSF+MHT
Sbjct: 485 MPLSEEEIRPYISRCAVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQG 544
Query: 362 XXXXLASPGSCLEDFRAIPFIEC 430
L SPGSCLEDFRA PF+EC
Sbjct: 545 GGQALMSPGSCLEDFRAAPFLEC 567
Score = 49.6 bits (113), Expect = 3e-05
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ +HSQT P CP+G LW GYS +++ L GSCL F +PF C
Sbjct: 400 LLVLHSQTDQEPACPMGMPRLWTGYS-LLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAYC 458
Query: 431 N 433
N
Sbjct: 459 N 459
Score = 37.1 bits (82), Expect = 0.16
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST------ 163
L++ ++ Q L GSC+ F PFL C C++ + N+ S+WL+T
Sbjct: 535 LMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFA-NEYSFWLTTVPPDLQ 593
Query: 164 --GQPIPMMPVEGNEIVKYISRCVVC 235
P P E + ISRC VC
Sbjct: 594 VFSAPSPDTLKESQAQRQKISRCQVC 619
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n=36;
Euteleostomi|Rep: Collagen alpha-4(IV) chain precursor -
Homo sapiens (Human)
Length = 1690
Score = 204 bits (499), Expect = 5e-52
Identities = 86/143 (60%), Positives = 104/143 (72%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY++G EKAHNQDLG AGSC+ FST+PF +C+++ VC+YA RNDRSYWL++ P+PM
Sbjct: 1492 SLLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPM 1551
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MP+ I Y+SRC VCE P+ +AVHSQ IP CP W LWIGYSF+MHT
Sbjct: 1552 MPLSEEAIRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQG 1611
Query: 362 XXXXLASPGSCLEDFRAIPFIEC 430
L SPGSCLEDFRA PF+EC
Sbjct: 1612 GGQALMSPGSCLEDFRAAPFLEC 1634
Score = 48.8 bits (111), Expect = 5e-05
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ +HSQT P CP+G LW GYS +++ L GSCL F +PF C
Sbjct: 1467 LLVLHSQTDQEPTCPLGMPRLWTGYS-LLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYC 1525
Query: 431 N 433
N
Sbjct: 1526 N 1526
Score = 36.3 bits (80), Expect = 0.28
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST------ 163
L++ ++ Q L GSC+ F PFL C C++ + N S+WL+T
Sbjct: 1602 LMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFA-NKYSFWLTTVKADLQ 1660
Query: 164 --GQPIPMMPVEGNEIVKYISRCVVC 235
P P E + ISRC VC
Sbjct: 1661 FSSAPAPDTLKESQAQRQKISRCQVC 1686
>UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellular
organisms|Rep: Collagen alpha-3(IV) chain - Bos taurus
(Bovine)
Length = 471
Score = 204 bits (498), Expect = 6e-52
Identities = 91/146 (62%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLL++ GNE+AH QDLG GSC+++F+TMPFLFC++NDVCN+ASRND SYWLST IPM
Sbjct: 273 SLLFVQGNEQAHGQDLGTLGSCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPAMIPM 332
Query: 182 --MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
P+ G + YISRC VCE P+ IAVHSQT DIP CP GW LW G+SF+M T
Sbjct: 333 DMAPITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPAGWISLWKGFSFIMFTSAGS 392
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
LASPGSCLE+FRA PFIEC+
Sbjct: 393 EGAGQALASPGSCLEEFRASPFIECH 418
Score = 49.6 bits (113), Expect = 3e-05
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST------- 163
+++ + Q L GSC+ +F PF+ C CNY S N S+WL++
Sbjct: 385 IMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGTCNYYS-NSYSFWLASLDPKRMF 443
Query: 164 GQPIPMMPVEGNEIVKYISRCVVC 235
+PIP V+ E+ ISRC VC
Sbjct: 444 RKPIP-STVKAGELENIISRCQVC 466
Score = 46.0 bits (104), Expect = 3e-04
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V HSQT IP CP G L+ G+S ++ L + GSCL+ F +PF+ C
Sbjct: 248 VFTRHSQTTAIPSCPEGTEPLYSGFS-LLFVQGNEQAHGQDLGTLGSCLQRFTTMPFLFC 306
Query: 431 N 433
N
Sbjct: 307 N 307
>UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabditis
elegans|Rep: Isoform b of P17139 - Caenorhabditis elegans
Length = 1502
Score = 201 bits (490), Expect = 6e-51
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+ P
Sbjct: 1305 SLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMTP 1364
Query: 179 MM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
MM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1365 MMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGA 1424
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE+FRA+PFIEC+
Sbjct: 1425 EGTGQSLQSPGSCLEEFRAVPFIECH 1450
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +2
Query: 257 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN 1339
Score = 35.5 bits (78), Expect = 0.49
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNE 202
Q L GSC+ +F +PF+ C CNY + N +W S PM ++
Sbjct: 1429 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGG 1487
Query: 203 IVKYISRCVVC 235
+ +SRC VC
Sbjct: 1488 LKDRVSRCQVC 1498
>UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4;
Strongylocentrotus purpuratus|Rep: Alpha2(IV)-like
collagen - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 1747
Score = 201 bits (490), Expect = 6e-51
Identities = 88/144 (61%), Positives = 108/144 (75%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
S+L+ GN AH+QDLG AGSC+++FSTMPFLFC+ N+VCNYASRNDRSYWL+T +P+PM
Sbjct: 1553 SVLFSMGNGHAHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTTNEPLPM 1612
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MP+ +I YISRC VCE P+ +A+HSQ+ +IP CP GW LW GYSF M+T
Sbjct: 1613 MPLMNQQIDPYISRCTVCEAPTQSLAIHSQSQEIPQCPGGWRSLWTGYSFTMYT-AASEG 1671
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L S GSCLE+FRA PFIECN
Sbjct: 1672 GGQGLESVGSCLENFRATPFIECN 1695
Score = 52.4 bits (120), Expect = 4e-06
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 254 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
I HSQ+ ++P CP G ELW G+S V+ + L GSCL+ F +PF+ CN
Sbjct: 1529 ITRHSQSRNVPSCPAGTVELWRGFS-VLFSMGNGHAHHQDLGDAGSCLQRFSTMPFLFCN 1587
Score = 38.7 bits (86), Expect = 0.053
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNE 202
Q L GSC+ F PF+ C+ C++ S N+ S+WL+ IP ++ +
Sbjct: 1674 QGLESVGSCLENFRATPFIECNGRGNCHFFS-NEYSFWLTVIDEEDQFAIPRKRTIKSGQ 1732
Query: 203 IVKYISRCVVCE 238
+ +SRC VC+
Sbjct: 1733 LQSVVSRCRVCQ 1744
>UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 180 bits (437), Expect(2) = 9e-51
Identities = 76/114 (66%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP- 178
SLLY+ GNE+AH QDLG AGSC+R+FSTMPF+FC++N+VCN+ASRND SYWLST +P+P
Sbjct: 234 SLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPM 293
Query: 179 -MMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVM 337
M P+ G I +ISRC VCE P+ VIAVHSQT+ IP CP W LWIGYSF+M
Sbjct: 294 SMAPITGESIKPFISRCAVCEAPAMVIAVHSQTIQIPTCPANWEALWIGYSFMM 347
Score = 49.6 bits (113), Expect = 3e-05
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK--- 211
Q L GSC+ +F + PF+ C CNY N S+WL+T +P M +E +K
Sbjct: 398 QALASPGSCLEEFRSAPFIECHGRGTCNYYG-NSYSFWLATVEPSEMFRKPQSETLKAGN 456
Query: 212 ---YISRCVVC 235
+SRCVVC
Sbjct: 457 LQTRVSRCVVC 467
Score = 46.0 bits (104), Expect = 3e-04
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ D+P CP G + ++ GYS +++ L + GSCL F +PF+ C
Sbjct: 209 LITRHSQAQDVPYCPDGTNLIYDGYS-LLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFC 267
Query: 431 N 433
N
Sbjct: 268 N 268
Score = 42.3 bits (95), Expect(2) = 9e-51
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2
Query: 338 HTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HT LASPGSCLE+FR+ PFIEC+
Sbjct: 388 HTSAGAEGSGQALASPGSCLEEFRSAPFIECH 419
>UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin]; n=61;
Eumetazoa|Rep: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin] - Homo
sapiens (Human)
Length = 1670
Score = 198 bits (484), Expect = 3e-50
Identities = 87/146 (59%), Positives = 107/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTG--QPI 175
S L++ GN++AH QDLG GSC+++F+TMPFLFC++NDVCN+ASRND SYWLST P+
Sbjct: 1472 SFLFVQGNQRAHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASRNDYSYWLSTPALMPM 1531
Query: 176 PMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
M P+ G + YISRC VCE P+ IAVHSQT DIP CP GW LW G+SF+M T
Sbjct: 1532 NMAPITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMFTSAGS 1591
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
LASPGSCLE+FRA PF+EC+
Sbjct: 1592 EGTGQALASPGSCLEEFRASPFLECH 1617
Score = 52.4 bits (120), Expect = 4e-06
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST------- 163
+++ + Q L GSC+ +F PFL C CNY S N S+WL++
Sbjct: 1584 IMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRGTCNYYS-NSYSFWLASLNPERMF 1642
Query: 164 GQPIPMMPVEGNEIVKYISRCVVC 235
+PIP V+ E+ K ISRC VC
Sbjct: 1643 RKPIP-STVKAGELEKIISRCQVC 1665
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V HSQT IP CP G L+ G+SF + L + GSCL+ F +PF+ C
Sbjct: 1447 VFTRHSQTTAIPSCPEGTVPLYSGFSF-LFVQGNQRAHGQDLGTLGSCLQRFTTMPFLFC 1505
Query: 431 N 433
N
Sbjct: 1506 N 1506
>UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstatin;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Tumstatin - Takifugu rubripes
Length = 1374
Score = 192 bits (467), Expect = 4e-48
Identities = 87/146 (59%), Positives = 105/146 (71%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLL+I+GN +AH QDLG GSC+ +F+TMPFLFC+ + C YASRND SYWLST Q +
Sbjct: 1178 SLLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTDSTCRYASRNDYSYWLSTNQVVLS 1237
Query: 179 MMP-VEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
MP + G+ + YISRC VCE +NVIA+HSQT +P CP+GW LW+GYSFVM T
Sbjct: 1238 NMPLISGDLLRSYISRCSVCETRTNVIAIHSQTSVVPDCPLGWLPLWVGYSFVMETGVGA 1297
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
LASPGSCLE FR IPFIEC+
Sbjct: 1298 EGSGQPLASPGSCLEQFRKIPFIECH 1323
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQ L IP CPVG +E++ GYS ++ L + GSCL F +PF+ CN
Sbjct: 1157 HSQELSIPECPVGSTEVYSGYS-LLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCN 1212
Score = 41.1 bits (92), Expect = 0.010
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM--PVEGNEIVKY 214
Q L GSC+ +F +PF+ C CNY + + SYWL+ P M P + ++
Sbjct: 1302 QPLASPGSCLEQFRKIPFIECHGRGTCNYYT-DSYSYWLAALSPHDMFSKPKPHTDTGEF 1360
Query: 215 ----ISRCVVC 235
ISRC VC
Sbjct: 1361 PGSLISRCRVC 1371
>UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 type IV
collagen; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to alpha-5 type IV collagen - Nasonia vitripennis
Length = 1702
Score = 188 bits (459), Expect = 3e-47
Identities = 83/145 (57%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLL++ GN AH QDLG GSC++KFS MPF C+LN+VC+YA+RND SYWLS+ + +PM
Sbjct: 1401 SLLHVMGNSYAHAQDLGTPGSCLKKFSVMPFNVCNLNNVCDYANRNDYSYWLSSNEQMPM 1460
Query: 182 M--PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
P+ E+ YISRC VCE P+ +I +HSQ++ IP CP GW ELW GYSF+MH
Sbjct: 1461 SMTPIPSREVGAYISRCSVCEAPTRLIVMHSQSMAIPECPGGWEELWAGYSFLMHRDAGA 1520
Query: 356 XXXXXXLASPGSCLEDFRAIPFIEC 430
L+SPGSCLE+FRA PFIEC
Sbjct: 1521 AGGGQPLSSPGSCLEEFRARPFIEC 1545
Score = 48.4 bits (110), Expect = 7e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 257 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
A HSQ+ IP CP ++W G+S ++H L +PGSCL+ F +PF CN
Sbjct: 1378 ARHSQSAMIPVCPRNTVKMWDGFS-LLHVMGNSYAHAQDLGTPGSCLKKFSVMPFNVCN 1435
Score = 40.7 bits (91), Expect = 0.013
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI--- 175
L++ D Q L GSC+ +F PF+ C CN+ S SYW++T +
Sbjct: 1513 LMHRDAGAAGGGQPLSSPGSCLEEFRARPFIECRGQGTCNFFS-TAVSYWMATIKDYEQF 1571
Query: 176 --PMMPVEGNEIVKYISRCVVC 235
P + +SRC VC
Sbjct: 1572 RKPQQQTLKTDHTSRVSRCSVC 1593
>UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Danio
rerio|Rep: Type IV collagen alpha 3 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 244
Score = 187 bits (456), Expect = 8e-47
Identities = 86/146 (58%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-IP 178
SLL+I+GN + H QDLG GSC+ F+TMPF+ C+ ++ C YASRND SYWLST P +P
Sbjct: 44 SLLFINGNNRGHGQDLGTLGSCLPMFNTMPFMVCNRDETCRYASRNDYSYWLSTDTPMLP 103
Query: 179 MMPVEGNEIVK-YISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
+ EI+K YISRC VCE +NVIA+HSQT++IP CPVGW LW GYSFVM T
Sbjct: 104 DQQMMSGEILKWYISRCSVCEAIANVIAIHSQTINIPQCPVGWLSLWEGYSFVMQTGVGA 163
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE FR IPFIEC+
Sbjct: 164 EGSGQPLVSPGSCLEQFRKIPFIECH 189
Score = 45.6 bits (103), Expect = 5e-04
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQT IP CP G L+ GYS ++ L + GSCL F +PF+ CN
Sbjct: 23 HSQTTVIPECPAGSKRLYTGYS-LLFINGNNRGHGQDLGTLGSCLPMFNTMPFMVCN 78
Score = 41.1 bits (92), Expect = 0.010
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK--- 211
Q L GSC+ +F +PF+ C CN+ + SYWL++ M + + K
Sbjct: 168 QPLVSPGSCLEQFRKIPFIECHGRGTCNFYP-DSYSYWLASLDHTNMFSMPNRQTAKQKE 226
Query: 212 YISRCVVC 235
ISRC VC
Sbjct: 227 IISRCQVC 234
>UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Collagen alpha 3; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Collagen alpha 3 - Takifugu rubripes
Length = 1258
Score = 186 bits (452), Expect = 2e-46
Identities = 84/146 (57%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP- 178
S L++ N++ H QDLG GSC+ FSTMPFL CD C YASRND SYWLSTG+ +P
Sbjct: 1064 SFLFMHANDRVHGQDLGTPGSCLPHFSTMPFLVCDTESNCRYASRNDYSYWLSTGKALPE 1123
Query: 179 -MMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
M+ + G+ + YISRC VCE SNVIAVHSQT IP CP W LW GYSFVM T
Sbjct: 1124 NMVSITGDMLASYISRCAVCETTSNVIAVHSQTTQIPDCPQDWVSLWSGYSFVMQTGIGA 1183
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE FR +PFIEC+
Sbjct: 1184 DGSSQPLISPGSCLETFRKVPFIECH 1209
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFV-MHTXXXXXXXXXXLASPGSCLEDFRAIPFIE 427
+IA HSQ++ IP CP G S L+ GYSF+ MH L +PGSCL F +PF+
Sbjct: 1039 MIARHSQSIHIPVCPCGTSLLFSGYSFLFMHA--NDRVHGQDLGTPGSCLPHFSTMPFLV 1096
Query: 428 CN 433
C+
Sbjct: 1097 CD 1098
Score = 40.3 bits (90), Expect = 0.017
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +2
Query: 38 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST-------GQPIPMMPVEG 196
+Q L GSC+ F +PF+ C CNY + S+W+++ G+PIP V+
Sbjct: 1187 SQPLISPGSCLETFRKVPFIECHGRGTCNYYP-DSYSFWMASLDPKNMFGKPIP-QTVKE 1244
Query: 197 NEIVKYISRCVVC 235
+ +SRC VC
Sbjct: 1245 PSLQSILSRCRVC 1257
>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; n=3;
Danio rerio|Rep: Type IV collagen alpha 4 chain - Danio
rerio
Length = 1639
Score = 183 bits (446), Expect = 1e-45
Identities = 81/143 (56%), Positives = 102/143 (71%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY++G E+AH QDLG AGSC+ FSTMPF C++ D C+YASRND+SYWLST PIP
Sbjct: 1444 SLLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCCNM-DTCDYASRNDKSYWLSTNAPIPN 1502
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
P++G +I ++ISRCVVCE P+ IA+HSQ P CP W LW G+SF+M+T
Sbjct: 1503 KPLKGQDIEEHISRCVVCEAPTPTIAIHSQDRLDPVCPPKWRSLWTGFSFMMYTGSGDEG 1562
Query: 362 XXXXLASPGSCLEDFRAIPFIEC 430
L S GSCL+DFR+ PF+EC
Sbjct: 1563 GGQSLTSTGSCLQDFRSQPFVEC 1585
Score = 48.4 bits (110), Expect = 7e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ +HSQ+ +P CP G ++LW GYS +++ L GSCL F +PF C
Sbjct: 1419 LLVMHSQSRYVPTCPAGLTQLWNGYS-LLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCC 1477
Query: 431 N 433
N
Sbjct: 1478 N 1478
>UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Danio
rerio|Rep: Type IV collagen alpha 4 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 240
Score = 183 bits (446), Expect = 1e-45
Identities = 81/143 (56%), Positives = 102/143 (71%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY++G E+AH QDLG AGSC+ FSTMPF C++ D C+YASRND+SYWLST PIP
Sbjct: 42 SLLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCCNM-DTCDYASRNDKSYWLSTNAPIPN 100
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
P++G +I ++ISRCVVCE P+ IA+HSQ P CP W LW G+SF+M+T
Sbjct: 101 KPLKGQDIEEHISRCVVCEAPTPTIAIHSQDRLDPVCPPKWRNLWTGFSFMMYTGSGDEG 160
Query: 362 XXXXLASPGSCLEDFRAIPFIEC 430
L S GSCL+DFR+ PF+EC
Sbjct: 161 GGQSLTSTGSCLQDFRSQPFVEC 183
Score = 48.4 bits (110), Expect = 7e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ +HSQ+ +P CP G ++LW GYS +++ L GSCL F +PF C
Sbjct: 17 LLVMHSQSRYVPTCPAGLTQLWNGYS-LLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCC 75
Query: 431 N 433
N
Sbjct: 76 N 76
>UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3;
Endopterygota|Rep: ENSANGP00000016652 - Anopheles
gambiae str. PEST
Length = 461
Score = 182 bits (443), Expect = 3e-45
Identities = 76/146 (52%), Positives = 105/146 (71%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SL+ + + ++ QDLG AGSC+R+FSTMPF+FCD+N+VCNYAS ND + WL+T +P+PM
Sbjct: 211 SLVNVIASSRSVGQDLGAAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPMPM 270
Query: 182 M--PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
P+ +++ +YISRC VCE + V+A+HSQ++ IP CP GW ELW+GYS+ MHT
Sbjct: 271 SMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSDNS 330
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
SPGSC+E+FR P IEC+
Sbjct: 331 GGFGQDFVSPGSCMEEFRPQPVIECH 356
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+ A HSQ + IP CP+ +LW GYS V + L + GSCL F +PF+ C
Sbjct: 186 LFARHSQKVTIPECPINTYKLWDGYSLV-NVIASSRSVGQDLGAAGSCLRRFSTMPFMFC 244
Query: 431 N 433
+
Sbjct: 245 D 245
Score = 35.5 bits (78), Expect = 0.49
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +2
Query: 8 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST-------G 166
++ N QD GSC+ +F P + C + CN+ S+WL+
Sbjct: 324 MHTSDNSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYD-GISSFWLTIIDDAMQFN 382
Query: 167 QPIPMMPVEGNEIVKYISRCVVCEVPSNVI 256
+P P ++ ++ K +SRC+VC + ++
Sbjct: 383 RPQP-QTLKAHQTSK-VSRCIVCRRKAGIM 410
>UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n=9;
Rattus norvegicus|Rep: UPI0000DBF028 UniRef100 entry -
Rattus norvegicus
Length = 1549
Score = 179 bits (436), Expect = 2e-44
Identities = 75/112 (66%), Positives = 93/112 (83%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLL+++G EKAHNQDLG+AGSC+ +FSTMPF++C++N+VC+YA RND+SYWLST PIPM
Sbjct: 1439 SLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPM 1498
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVM 337
MPV +I +YISRC VCE PS IAVHSQ +P CP+GW LWIGYSF+M
Sbjct: 1499 MPVGETQIPQYISRCSVCEAPSQAIAVHSQD-TVPQCPLGWHSLWIGYSFLM 1549
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQ+ +P CP+G S+LW+GYS ++ L GSCL F +PFI CN
Sbjct: 1418 HSQSEHVPPCPIGMSQLWVGYS-LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN 1473
>UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio
"Collagen, type I, alpha 3.; n=1; Takifugu rubripes|Rep:
Homolog of Brachydanio rerio "Collagen, type I, alpha 3.
- Takifugu rubripes
Length = 1426
Score = 178 bits (433), Expect = 5e-44
Identities = 80/143 (55%), Positives = 95/143 (66%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SL Y+ G + AH QDLG AGSC+R FSTMPF +C+ C+++SRND+SYWLST PIPM
Sbjct: 1232 SLAYLKGQKNAHAQDLGQAGSCLRVFSTMPFSYCN-KAACHFSSRNDKSYWLSTAAPIPM 1290
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV G EI +ISRCVVCE S + HSQ P CP GW LW GYSF+MHT
Sbjct: 1291 MPVFGQEISSHISRCVVCETVSPAVVFHSQEHTAPACPQGWRSLWTGYSFLMHTGAGDEG 1350
Query: 362 XXXXLASPGSCLEDFRAIPFIEC 430
L S GSCL++F+ P IEC
Sbjct: 1351 SGQALTSSGSCLKNFQTHPIIEC 1373
Score = 53.2 bits (122), Expect = 2e-06
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +2
Query: 242 PSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPF 421
P ++ +HSQ++ +P CP G S LW+GYS + + L GSCL F +PF
Sbjct: 1204 PGFLLVIHSQSVQVPKCPDGSSLLWVGYS-LAYLKGQKNAHAQDLGQAGSCLRVFSTMPF 1262
Query: 422 IECN 433
CN
Sbjct: 1263 SYCN 1266
>UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precursor;
n=1; Hydra vulgaris|Rep: Type IV collagen alpha 1 chain
precursor - Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 1723
Score = 177 bits (431), Expect = 8e-44
Identities = 78/144 (54%), Positives = 98/144 (68%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
S LY GNE+A QDLG GSC+++FSTMPFLFCD+ + C ASRND S+WLST +
Sbjct: 1528 SFLYAQGNERAFGQDLGQPGSCLKRFSTMPFLFCDIQNKCVVASRNDYSFWLSTAEKPKE 1587
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
P G ++ YISRC+VCE PS+V+AVHSQ+ P CP GW LW G+SF+M+
Sbjct: 1588 APSSGADLENYISRCIVCEAPSHVLAVHSQSELDPKCPDGWENLWTGFSFLMYNSAGAQG 1647
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L+S GSCLEDFR P+IEC+
Sbjct: 1648 SGQLLSSSGSCLEDFRVNPYIECH 1671
Score = 54.8 bits (126), Expect = 7e-07
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQ++ +P CP G +W GYSF ++ L PGSCL+ F +PF+ C+
Sbjct: 1507 HSQSIKVPSCPAGMQTMWEGYSF-LYAQGNERAFGQDLGQPGSCLKRFSTMPFLFCD 1562
Score = 39.9 bits (89), Expect = 0.023
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 5 LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST-GQ---- 169
L+Y + Q L +GSC+ F P++ C C Y S+WLST G+
Sbjct: 1638 LMYNSAGAQGSGQLLSSSGSCLEDFRVNPYIECHGRGTCWYYGPT-LSFWLSTIGESNMF 1696
Query: 170 PIPMMPVEGNEIVKYISRCVVC 235
+P + + +SRC VC
Sbjct: 1697 QVPKFEILERNLKARVSRCAVC 1718
>UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG16858-PA
- Drosophila melanogaster (Fruit fly)
Length = 1940
Score = 175 bits (426), Expect = 3e-43
Identities = 72/137 (52%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Frame = +2
Query: 29 KAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM--PVEGNE 202
+A QDLG +GSC+ +F+TMP++ CD+ +VC++A ND S WLST +P+PM P++G +
Sbjct: 1551 RAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRD 1610
Query: 203 IVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLAS 382
++KYISRCVVCE + +IA+HSQ++ IP CP GW E+W GYS+ M T L S
Sbjct: 1611 LMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVS 1670
Query: 383 PGSCLEDFRAIPFIECN 433
PGSCLE+FRA P IEC+
Sbjct: 1671 PGSCLEEFRAQPVIECH 1687
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+ A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C
Sbjct: 1517 IFARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLC 1575
Query: 431 N 433
+
Sbjct: 1576 D 1576
Score = 33.1 bits (72), Expect = 2.6
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPMMPVEGNEI 205
Q+L GSC+ +F P + C + CNY S+WL+ + P +
Sbjct: 1666 QNLVSPGSCLEEFRAQPVIECHGHGRCNYYDAL-ASFWLTVIEEQDQFVQPRQQTLKADF 1724
Query: 206 VKYISRCVVCEVPSN 250
ISRC VC N
Sbjct: 1725 TSKISRCTVCRRRGN 1739
>UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollagen,
type IV, alpha 6; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to procollagen, type IV, alpha 6 - Rattus
norvegicus
Length = 1405
Score = 149 bits (361), Expect = 3e-35
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLL+++G EKAHNQDLG+AGSC+ +FSTMPF++C++N+VC+YA RND+SYWLST PIPM
Sbjct: 1275 SLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPM 1334
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 310
MPV +I +YISRC VCE PS IAVHSQ P G ++
Sbjct: 1335 MPVGETQIPQYISRCSVCEAPSQAIAVHSQDNHRSTVPFGLAQ 1377
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQ+ +P CP+G S+LW+GYS ++ L GSCL F +PFI CN
Sbjct: 1254 HSQSEHVPPCPIGMSQLWVGYS-LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN 1309
>UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium
jarrei|Rep: Collagen type IV - Pseudocorticium jarrei
Length = 854
Score = 141 bits (342), Expect = 5e-33
Identities = 68/143 (47%), Positives = 84/143 (58%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLL + GN QDLG GSC+ F MP + C+ C +A R D SYWLST P
Sbjct: 656 SLLQLTGNGLGVGQDLGDPGSCMPSFHPMPVVRCNPMQRCEFARRKDESYWLSTNATRPP 715
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
+PV G++I ++ISRC VCE S IAVHSQ ++P C GW LW G+SF+ T
Sbjct: 716 IPVSGSDIEEHISRCSVCESNSISIAVHSQDSNVPDCFPGWVTLWTGFSFLQQTAAQAEG 775
Query: 362 XXXXLASPGSCLEDFRAIPFIEC 430
L SPGSCL+ FR+ PFI C
Sbjct: 776 TGQGLESPGSCLQHFRSTPFIGC 798
Score = 57.2 bits (132), Expect = 1e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
++ VHSQT +IP CP ++ LW+GYS + T L PGSC+ F +P + C
Sbjct: 631 LLVVHSQTTNIPQCPNDYTRLWVGYSLLQLT-GNGLGVGQDLGDPGSCMPSFHPMPVVRC 689
Query: 431 N 433
N
Sbjct: 690 N 690
Score = 39.1 bits (87), Expect = 0.040
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-PMMPVEG-----NE 202
Q L GSC++ F + PF+ C C+Y S + SYW+ + P E ++
Sbjct: 778 QGLESPGSCLQHFRSTPFIGCGGRGQCSYDSVSG-SYWMIVLDALNPFQDTEPGTYPVSD 836
Query: 203 IVKYISRCVVCE 238
I K +SRC VCE
Sbjct: 837 IEKRLSRCRVCE 848
>UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2;
Platyhelminthes|Rep: SJCHGC06113 protein - Schistosoma
japonicum (Blood fluke)
Length = 587
Score = 130 bits (313), Expect = 2e-29
Identities = 59/132 (44%), Positives = 79/132 (59%)
Frame = +2
Query: 38 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYI 217
+ DLG SC+ KFS++P C+ + C + R++RSYWL+T P P+ N+ I
Sbjct: 400 SMDLGTPSSCLSKFSSLPMTQCERDTTCQSSMRHERSYWLATLVPRSEQPIPVNQTADQI 459
Query: 218 SRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCL 397
+RCVVCE PS+V A HSQ + CP W+ELW G S ++HT L+SPGSC+
Sbjct: 460 ARCVVCEAPSHVFAFHSQGETLQPCPSTWTELWTGVSLILHT-SGAHGGGQQLSSPGSCM 518
Query: 398 EDFRAIPFIECN 433
E FR P IECN
Sbjct: 519 EHFRYSPVIECN 530
Score = 37.9 bits (84), Expect = 0.092
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 245 SNVIAVHSQTLDIPG--CPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIP 418
S + A H QT + CP G ++L+ GYS+VM L +P SCL F ++P
Sbjct: 359 SILFARHYQTPFVENLTCPGGTNKLFTGYSYVM-GGGVDDLVSMDLGTPSSCLSKFSSLP 417
Query: 419 FIEC 430
+C
Sbjct: 418 MTQC 421
>UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14677,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 856
Score = 93.1 bits (221), Expect = 2e-18
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLL+I+GN +AH QDLG GSC+ +F+TMPFLFC+ + C YASRND SYWLST + +
Sbjct: 762 SLLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTDRTCRYASRNDYSYWLSTNKMVLS 821
Query: 179 MMP-VEGNEIVKYISR 223
MP + G+ + YISR
Sbjct: 822 NMPLISGDLLRSYISR 837
Score = 44.8 bits (101), Expect = 8e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 263 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
HSQ L IP CP G ++++ GYS ++ L + GSCL F +PF+ CN
Sbjct: 741 HSQELYIPECPAGSTQVYSGYS-LLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCN 796
>UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08138 protein - Schistosoma
japonicum (Blood fluke)
Length = 206
Score = 77.4 bits (182), Expect = 1e-13
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFC--DLNDVCNYASRNDRSYWLSTGQPI 175
SL+ + G++ + DLG GSC+RKFS MPF C +N C RN RSYWLST +
Sbjct: 120 SLVTLQGDDDSTTMDLGTPGSCLRKFSIMPFANCFAKVNGNCQINMRNGRSYWLSTLEQY 179
Query: 176 PMMPVEGNEIVKYISRCVVCE 238
+ P I YISRC+VC+
Sbjct: 180 MLSPARVENIKPYISRCIVCQ 200
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+ VHSQ P CP+ + ++ GYS V L +PGSCL F +PF C
Sbjct: 95 LFTVHSQDSQPPSCPIYTTPVYTGYSLVT-LQGDDDSTTMDLGTPGSCLRKFSIMPFANC 153
>UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 590
Score = 74.5 bits (175), Expect = 9e-13
Identities = 29/49 (59%), Positives = 41/49 (83%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRS 148
SLLY+ G++ +H QDLG AGSC+++F+TMP+L+C++ CNYASRND S
Sbjct: 502 SLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCNIFGKCNYASRNDYS 550
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 254 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
I HSQT P CP + +LW GYS +++ L GSCL+ F +P++ CN
Sbjct: 478 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 536
>UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 331
Score = 73.7 bits (173), Expect = 2e-12
Identities = 28/47 (59%), Positives = 40/47 (85%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRND 142
SLLY+ G++ +H QDLG AGSC+++F+TMP+L+C++ CNYASRND
Sbjct: 283 SLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCNIFGKCNYASRND 329
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 254 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
I HSQT P CP + +LW GYS +++ L GSCL+ F +P++ CN
Sbjct: 259 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 317
>UniRef50_A4RDD1 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 767
Score = 32.7 bits (71), Expect = 3.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 107 LNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISR 223
+ ++A RN +LS G PIP MPV+ N V +SR
Sbjct: 49 VTSTASFADRNLVVSYLSDGDPIPSMPVDRNLTVSPLSR 87
>UniRef50_A0CNR1 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_22, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1157
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 113 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTL 277
D CN A R Y+L+ GQP P +E I++ + + + S+TL
Sbjct: 994 DACNEALNYQRQYYLNQGQPYPWEQLEYQAIIQKDKLSTILRNMEDKVLTWSKTL 1048
>UniRef50_A7CTI8 Cluster: Putative uncharacterized protein
precursor; n=1; Opitutaceae bacterium TAV2|Rep: Putative
uncharacterized protein precursor - Opitutaceae
bacterium TAV2
Length = 320
Score = 31.5 bits (68), Expect = 8.0
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 328 TVTNPQFTPSYWATWNV*CLAVDSYNIRWHFAYNTSRNVFYYLISFYRHHWNRLT 164
TV +P Y+ +A ++ Y TS ++YYL FY+H ++ T
Sbjct: 27 TVNSPHSISPYYTPGGSNSIASYDWDSNGDLFYQTSTPIYYYLGGFYKHEFSTST 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,906,250
Number of Sequences: 1657284
Number of extensions: 8076864
Number of successful extensions: 17639
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 17133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17578
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -