Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P17
(434 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 224 4e-59
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 224 4e-59
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 224 4e-59
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 217 5e-57
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 217 5e-57
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 217 5e-57
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 217 5e-57
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 175 2e-44
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 175 2e-44
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 224 bits (548), Expect = 4e-59
Identities = 98/144 (68%), Positives = 113/144 (78%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1582 SLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1641
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1642 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1701
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1702 GGQALQSPGSCLEDFRATPFIECN 1725
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC 1615
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 224 bits (548), Expect = 4e-59
Identities = 98/144 (68%), Positives = 113/144 (78%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1582 SLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1641
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1642 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1701
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1702 GGQALQSPGSCLEDFRATPFIECN 1725
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC 1615
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 224 bits (548), Expect = 4e-59
Identities = 98/144 (68%), Positives = 113/144 (78%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1582 SLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1641
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1642 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1701
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1702 GGQALQSPGSCLEDFRATPFIECN 1725
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC 1615
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 217 bits (530), Expect = 5e-57
Identities = 97/144 (67%), Positives = 112/144 (77%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1581 SLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1637
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1638 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1697
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1698 GGQALQSPGSCLEDFRATPFIECN 1721
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 217 bits (530), Expect = 5e-57
Identities = 97/144 (67%), Positives = 112/144 (77%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 227 SLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 283
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 284 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 343
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 344 GGQALQSPGSCLEDFRATPFIECN 367
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 202 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 257
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 217 bits (530), Expect = 5e-57
Identities = 97/144 (67%), Positives = 112/144 (77%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1581 SLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1637
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1638 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1697
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1698 GGQALQSPGSCLEDFRATPFIECN 1721
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 217 bits (530), Expect = 5e-57
Identities = 97/144 (67%), Positives = 112/144 (77%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPM
Sbjct: 1581 SLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPM 1637
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1638 MPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1697
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLEDFRA PFIECN
Sbjct: 1698 GGQALQSPGSCLEDFRATPFIECN 1721
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 175 bits (426), Expect = 2e-44
Identities = 72/137 (52%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Frame = +2
Query: 29 KAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM--PVEGNE 202
+A QDLG +GSC+ +F+TMP++ CD+ +VC++A ND S WLST +P+PM P++G +
Sbjct: 1549 RAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRD 1608
Query: 203 IVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLAS 382
++KYISRCVVCE + +IA+HSQ++ IP CP GW E+W GYS+ M T L S
Sbjct: 1609 LMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVS 1668
Query: 383 PGSCLEDFRAIPFIECN 433
PGSCLE+FRA P IEC+
Sbjct: 1669 PGSCLEEFRAQPVIECH 1685
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+ A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C
Sbjct: 1515 IFARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLC 1573
Query: 431 N 433
+
Sbjct: 1574 D 1574
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPMMPVEGNEI 205
Q+L GSC+ +F P + C + CNY S+WL+ + P +
Sbjct: 1664 QNLVSPGSCLEEFRAQPVIECHGHGRCNYYDAL-ASFWLTVIEEQDQFVQPRQQTLKADF 1722
Query: 206 VKYISRCVVCEVPSN 250
ISRC VC N
Sbjct: 1723 TSKISRCTVCRRRGN 1737
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 175 bits (426), Expect = 2e-44
Identities = 72/137 (52%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Frame = +2
Query: 29 KAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM--PVEGNE 202
+A QDLG +GSC+ +F+TMP++ CD+ +VC++A ND S WLST +P+PM P++G +
Sbjct: 1551 RAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRD 1610
Query: 203 IVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLAS 382
++KYISRCVVCE + +IA+HSQ++ IP CP GW E+W GYS+ M T L S
Sbjct: 1611 LMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVS 1670
Query: 383 PGSCLEDFRAIPFIECN 433
PGSCLE+FRA P IEC+
Sbjct: 1671 PGSCLEEFRAQPVIECH 1687
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
+ A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C
Sbjct: 1517 IFARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLC 1575
Query: 431 N 433
+
Sbjct: 1576 D 1576
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPMMPVEGNEI 205
Q+L GSC+ +F P + C + CNY S+WL+ + P +
Sbjct: 1666 QNLVSPGSCLEEFRAQPVIECHGHGRCNYYDAL-ASFWLTVIEEQDQFVQPRQQTLKADF 1724
Query: 206 VKYISRCVVCEVPSN 250
ISRC VC N
Sbjct: 1725 TSKISRCTVCRRRGN 1739
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,048,431
Number of Sequences: 53049
Number of extensions: 373491
Number of successful extensions: 775
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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