Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P17
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 246 7e-66
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 246 7e-66
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 244 2e-65
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 241 2e-64
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 241 2e-64
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 241 2e-64
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 203 5e-53
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 203 5e-53
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 203 5e-53
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 203 5e-53
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 3.4
U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 5.9
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 246 bits (601), Expect = 7e-66
Identities = 105/144 (72%), Positives = 117/144 (81%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRND+SYWLST + IPM
Sbjct: 1558 SLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNDKSYWLSTSEAIPM 1617
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1618 MPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEG 1677
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L+SPGSCLEDFRA PFIECN
Sbjct: 1678 GGQSLSSPGSCLEDFRATPFIECN 1701
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 431 N 433
+
Sbjct: 1592 D 1592
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 246 bits (601), Expect = 7e-66
Identities = 105/144 (72%), Positives = 117/144 (81%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRND+SYWLST + IPM
Sbjct: 1559 SLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNDKSYWLSTSEAIPM 1618
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1619 MPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEG 1678
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L+SPGSCLEDFRA PFIECN
Sbjct: 1679 GGQSLSSPGSCLEDFRATPFIECN 1702
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 431 N 433
+
Sbjct: 1593 D 1593
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 244 bits (597), Expect = 2e-65
Identities = 104/144 (72%), Positives = 117/144 (81%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IPM
Sbjct: 61 SLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPM 120
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 121 MPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEG 180
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
L+SPGSCLEDFRA PFIECN
Sbjct: 181 GGQSLSSPGSCLEDFRATPFIECN 204
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 36 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 94
Query: 431 N 433
+
Sbjct: 95 D 95
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 241 bits (590), Expect = 2e-64
Identities = 103/144 (71%), Positives = 116/144 (80%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IPM
Sbjct: 1559 SLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPM 1618
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1619 MPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEG 1678
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
+SPGSCLEDFRA PFIECN
Sbjct: 1679 GGQSPSSPGSCLEDFRATPFIECN 1702
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 431 N 433
+
Sbjct: 1593 D 1593
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 241 bits (590), Expect = 2e-64
Identities = 103/144 (71%), Positives = 116/144 (80%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IPM
Sbjct: 1558 SLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPM 1617
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1618 MPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEG 1677
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
+SPGSCLEDFRA PFIECN
Sbjct: 1678 GGQSPSSPGSCLEDFRATPFIECN 1701
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 431 N 433
+
Sbjct: 1592 D 1592
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 241 bits (590), Expect = 2e-64
Identities = 103/144 (71%), Positives = 116/144 (80%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 181
SLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IPM
Sbjct: 1595 SLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIPM 1654
Query: 182 MPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXX 361
MPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1655 MPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEG 1714
Query: 362 XXXXLASPGSCLEDFRAIPFIECN 433
+SPGSCLEDFRA PFIECN
Sbjct: 1715 GGQSPSSPGSCLEDFRATPFIECN 1738
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 251 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 430
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1570 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1628
Query: 431 N 433
+
Sbjct: 1629 D 1629
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 203 bits (495), Expect = 5e-53
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+ P
Sbjct: 1305 SLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMTP 1364
Query: 179 MM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
MM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1365 MMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGA 1424
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE+FRA+PFIEC+
Sbjct: 1425 EGTGQSLQSPGSCLEEFRAVPFIECH 1450
Score = 57.6 bits (133), Expect = 4e-09
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +2
Query: 257 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN 1339
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNE 202
Q L GSC+ +F +PF+ C CNY + N +WLS PM ++
Sbjct: 1429 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWLSIVDQDKQFRKPMSQTLKAGG 1487
Query: 203 IVKYISRCVVC 235
+ +SRC VC
Sbjct: 1488 LKDRVSRCQVC 1498
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 203 bits (495), Expect = 5e-53
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+ P
Sbjct: 1562 SLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMTP 1621
Query: 179 MM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
MM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1622 MMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGA 1681
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE+FRA+PFIEC+
Sbjct: 1682 EGTGQSLQSPGSCLEEFRAVPFIECH 1707
Score = 57.6 bits (133), Expect = 4e-09
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +2
Query: 257 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1539 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN 1596
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNE 202
Q L GSC+ +F +PF+ C CNY + N +WLS PM ++
Sbjct: 1686 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWLSIVDQDKQFRKPMSQTLKAGG 1744
Query: 203 IVKYISRCVVC 235
+ +SRC VC
Sbjct: 1745 LKDRVSRCQVC 1755
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 203 bits (495), Expect = 5e-53
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+ P
Sbjct: 1561 SLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMTP 1620
Query: 179 MM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
MM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1621 MMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGA 1680
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE+FRA+PFIEC+
Sbjct: 1681 EGTGQSLQSPGSCLEEFRAVPFIECH 1706
Score = 57.6 bits (133), Expect = 4e-09
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +2
Query: 257 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1538 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN 1595
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNE 202
Q L GSC+ +F +PF+ C CNY + N +W S PM ++
Sbjct: 1685 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGG 1743
Query: 203 IVKYISRCVVC 235
+ +SRC VC
Sbjct: 1744 LKDRVSRCQVC 1754
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 203 bits (495), Expect = 5e-53
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 SLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI-P 178
SLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+ P
Sbjct: 116 SLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMTP 175
Query: 179 MM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 355
MM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 176 MMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGA 235
Query: 356 XXXXXXLASPGSCLEDFRAIPFIECN 433
L SPGSCLE+FRA+PFIEC+
Sbjct: 236 EGTGQSLQSPGSCLEEFRAVPFIECH 261
Score = 57.6 bits (133), Expect = 4e-09
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +2
Query: 257 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 433
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 93 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN 150
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 41 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNE 202
Q L GSC+ +F +PF+ C CNY + N +W S PM ++
Sbjct: 240 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGG 298
Query: 203 IVKYISRCVVC 235
+ +SRC VC
Sbjct: 299 LKDRVSRCQVC 309
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 38 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 169
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical
protein C52B9.4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 4.4
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +2
Query: 149 YWLSTG--QPIPMMPVEGNEIVKYISRCVVCEVPSNVIA-----VHSQTLDI-PGCPVGW 304
YW+ T I M+ ++ N+I + R + +VIA + S I P C V W
Sbjct: 368 YWIFTSLASTIRMLRLKRNDIKLNVYRHFANTLAFSVIASVIFMLWSMIYHIFPTCRVDW 427
Query: 305 SELWIGYSF 331
ELW+ +F
Sbjct: 428 KELWVDTAF 436
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 95 LFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEI--VKYISRCVVCEVPSNVIAVHS 268
LF L N + + +YW+ G+P+P ++ +K I E + IA H
Sbjct: 2350 LFPSLVQSFNISKIKNLAYWVVGGEPLPQSLLDSALALGIKVIQNYGPTETTAFAIAKHM 2409
Query: 269 QTLDIPGCPVG 301
+ D GC +G
Sbjct: 2410 KKGD-AGCQIG 2419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,972,009
Number of Sequences: 27780
Number of extensions: 204189
Number of successful extensions: 455
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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