Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P16
(580 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45931| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 40 0.001
SB_29408| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0) 31 0.68
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 0.90
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 2.1
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.8
SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3) 28 4.8
SB_269| Best HMM Match : ubiquitin (HMM E-Value=1.2e-09) 28 6.3
SB_37669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_52587| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2) 27 8.4
>SB_45931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 369 FLAEYAGPLFVYLWVYQRPWILYGEQTST 455
F+AEYAGPL VYL++Y RP +YG ++
Sbjct: 2 FMAEYAGPLAVYLFLYARPSFIYGADAAS 30
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 153 KIQLNEESTIKNVKEKIHSSVKTSLYPDRQAIKLEAKGKTLNDEDTLKSLNI 308
K+++ E+ T+ +K+KI + YP IKL GK LND++ LK NI
Sbjct: 80 KVEIGEDETVLKLKQKIEADKGKDAYPHGN-IKLIYAGKILNDDNPLKEYNI 130
>SB_29408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 429 ILYGEQTSTPGHVATVAAVCWSAHYAKRLFETQFIHRFSHG 551
+ YG T T TV AV W H + + +Q+IH HG
Sbjct: 194 VWYGHSTYTRYGTVTVHAV-WCGHSTRGMIRSQYIHEVWHG 233
>SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0)
Length = 1182
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 183 KNVKEKIHSSVKTSL-Y-PDRQAIKLEAKGKTLNDEDTLKSLNIQNGYKL 326
+N+K I S + S+ Y P + + ++ GKT D+ L SLN++ G K+
Sbjct: 735 RNMKYDIRVSARNSMGYGPPSKVVSVKYTGKTPTDDIKLSSLNLKQGAKI 784
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 30.7 bits (66), Expect = 0.90
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 138 SKPLGKIQLNEESTIKNVKEK----IHSSVKTSLYPDRQAIKLEAKGKTLNDEDT--LKS 299
+K +G +Q NEE T+++VKE + K S + Q +L+ K + L DE+ S
Sbjct: 1038 TKKIGSVQENEEGTLESVKESNSNILQEKKKQSDEFNFQVAELKEKVQALEDENRKGASS 1097
Query: 300 L-NIQNGYKLYVKDLGPQI 353
L +I+ Y+L + +L I
Sbjct: 1098 LDDIKVKYELLIANLKDDI 1116
>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 LYPDRQAIKLEAKGKTLNDEDTLKSLNIQNGYKLYVK-DLGPQISWKNVFLAEYAGPLFV 401
L D ++K + + +TL E+T+++L I+ G L I+ N LA L +
Sbjct: 89 LNKDMSSLKQKHRNETLRSEETIQNLEIELGNAQNTNTSLMQDITQLNNLLASSQKTLKI 148
Query: 402 YLWVYQRPWILYGEQTSTPGHVATVAAVCWSAHYAKRLFETQ 527
R L + TS GH+ T+ A C+ + ++ + Q
Sbjct: 149 ------REDELREKSTSKFGHIHTLRAYCFQLYSCEQTMDDQ 184
>SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 990
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 153 KIQLNEESTIKNVKEKIH----SSVKTSLYPDRQAIKLEAKGKTLNDEDTLKSLNIQNGY 320
+++ NEE KN +K + + + +Y +R+A +++ TL D +KSL +++ Y
Sbjct: 40 RLRSNEEYNQKNGYDKGYLDRRNDIPKRVYENREA-NVDSSEPTLEDRTLIKSLPLKDIY 98
Query: 321 KLYVKDLG 344
Y +LG
Sbjct: 99 NDYRSELG 106
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 113 DRNFKRCWFQTSRKNSVK-*RIYYKECKRK 199
DRNF R W+ SR + K ++ +EC RK
Sbjct: 140 DRNFNRQWYFISRNAATKHLKLLTRECNRK 169
>SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3)
Length = 535
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 113 DRNFKRCWFQTSRKNSVK-*RIYYKECKRK 199
DRNF R W+ SR + K ++ +EC RK
Sbjct: 139 DRNFNRQWYFISRNAATKHLKLLTRECNRK 168
>SB_269| Best HMM Match : ubiquitin (HMM E-Value=1.2e-09)
Length = 414
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 159 QLNEESTIKNVKEKIHSSVKTSLYPDRQAIKLEAKGKTLNDEDTLKSLNIQNGYKLY--V 332
Q++E I VK + + + +RQ +L KGKTL D+ +L I +G KLY +
Sbjct: 119 QVSETEPILAVKTLVAQELDVQV--ERQ--RLVYKGKTLADDCSLDEYLIGDGSKLYLSI 174
Query: 333 KDLGPQ 350
K L Q
Sbjct: 175 KKLSSQ 180
>SB_37669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 349 CGPKSLTYSLYPFCMFKDFRVSSSFKVLPLASNLIACRSGYNE 221
CGPK+L +L P F+ F S +++ +N+ A + +E
Sbjct: 46 CGPKNLPGNLSPLSFFELFFKSEVIELIVTETNMYAVQCNTDE 88
>SB_52587| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2)
Length = 237
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 168 EESTIKNVKEKIHSSVKTSLYPDRQAIKLEAKGKTLNDEDTLKSLNIQNGYKLYVK 335
E+ I + EK + L P + + GK+LN+ D NI+ LY+K
Sbjct: 169 EQQFIDQILEKNDLYERERLSPRGERLSPRESGKSLNNNDEFSQDNIKELKMLYLK 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,717,975
Number of Sequences: 59808
Number of extensions: 332656
Number of successful extensions: 780
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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