BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P16
(580 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 27 0.33
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 24 4.1
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 4.1
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 4.1
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 5.4
AY391746-1|AAR28996.1| 502|Anopheles gambiae putative GPCR prot... 23 9.5
AY117994-1|AAM66793.1| 120|Anopheles gambiae glucose-6-phosphat... 23 9.5
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 27.5 bits (58), Expect = 0.33
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 157 IFPRGLEPATLKISISIIVNYPENLKSITRLNK*TISI 44
+ P+ EPA +S ++ N+P L+ I L + +SI
Sbjct: 678 LLPKESEPAGFSLSATLFTNHPHRLEIIPNLLRVFVSI 715
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.8 bits (49), Expect = 4.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 313 FCMFKDFRVSSSFKVLPLASNL-IACRSGYNE 221
F +K R+ VL L +N I C +GYNE
Sbjct: 8 FQCYKQLRIYKWIIVLMLIANSSILCMAGYNE 39
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 4.1
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = +2
Query: 395 IRIPLGLPKALDSLWRTNFYSWS 463
I + +G+P+ L++L+ F++W+
Sbjct: 120 ITLSIGVPETLEALFAFPFHAWA 142
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 4.1
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = +2
Query: 395 IRIPLGLPKALDSLWRTNFYSWS 463
I + +G+P+ L++L+ F++W+
Sbjct: 120 ITLSIGVPETLEALFAFPFHAWA 142
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.4 bits (48), Expect = 5.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 428 DSLWRTNFYSWSCSNCG 478
D++ + FY W CS+ G
Sbjct: 606 DTISESEFYGWDCSDDG 622
>AY391746-1|AAR28996.1| 502|Anopheles gambiae putative GPCR
protein.
Length = 502
Score = 22.6 bits (46), Expect = 9.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 47 RNCLLIQTCNRFQIFWIIYNNGDRNFKRCWFQTSRKNS 160
+NC + F I +I+Y +NF++ F +K S
Sbjct: 411 QNCCQLFFMTNFGINFILYCVSGQNFRKAIFGMFQKRS 448
>AY117994-1|AAM66793.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 22.6 bits (46), Expect = 9.5
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 383 CRAIIRIPLGLPKALDSLWRTNFY-SWSCSN 472
CR I++ + + W NFY + SC +
Sbjct: 19 CRQYIKVQEDQAEKFEEFWSVNFYVAGSCDS 49
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,266
Number of Sequences: 2352
Number of extensions: 11855
Number of successful extensions: 67
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -